Suncus etruscus (white-toothed pygmy shrew): 126011915
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Entry
126011915 CDS
T09902
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126011915 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126011915 (DHX36)
03012 Translation factors [BR:
setr03012
]
126011915 (DHX36)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126011915 (DHX36)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126011915 (DHX36)
Translation factors [BR:
setr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126011915 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
126011915
NCBI-ProteinID:
XP_049631628
LinkDB
All DBs
Position
6:67061417..67087201
Genome browser
AA seq
1002 aa
AA seq
DB search
MSYEQRPSWDRGGSRDSAGGYGGSYDGGRGPGRGGGGGGRGGRGRHPGHLKGREIGLWYA
KKQGQKNKEAERRERAVVHMDEHREEQIVQLLHSVQAKSEKDSTEEHISWFSPEDHGYGT
EAPAQSKPPSEKKLENQDKRPGKPEKRPFQIRDQYRDRDSEYICQENEPDGILDQQLLEE
LQKKKTDLRYIEMQRFREKLPSFRMRKELVNLISGHQVTVISGETGCGKTTQVTQFILDD
YIERGQGSMCRIVCTQPRRISAISVAERVAAERAESCGGGNSTGYQIRLQSRLPRKQGSI
LYCTTGIILQWLQSDPRLASVSHVVLDEIHERNLQSDVLMTVIKDLLVFRPDLKVVLMSA
TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYIPKQKEHRSQSKRGFMQGHV
HRQEKEEKEALYRERWPSYLKELEKKYSPSTVGVLEMMDDEKVDLNLISELIRYIVLEEE
DGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKI
VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISIMSAEWVSNANAKQRKGRAGRVQ
PGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIADFLGRLMDPPSNEAV
SLAIRHLIELTALDKEQELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF
KDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRSEKDYCWEYFLS
SNTLQMLHNMKTQFTEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIR
LNSGKKRKTVKVYTESDGLVAIHPKSVNVEQMDFHYNWLIYHLKMRTSSIYLYDCTEVSP
YCLLFFGGDISIQKDKEQETIAVDQWIVFQSPARIAHLVKELRKELDALLREKIENPHPV
DWKDTESRDCAVLSAITDLIKSQEKATPRNGPSRFQDSSYYS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcggccgagctgggaccgcggcgggtcccgcgactcggccggcggc
tacgggggcagctatgacgggggccgggggccaggccggggcggcggcggcggggggcgc
ggcgggcgcggccggcaccccgggcatctcaagggccgcgagatcggcctgtggtacgcc
aagaagcagggccagaagaacaaggaggccgagcggcgggagagggctgtagtacacatg
gacgagcaccgggaggagcagatcgtgcagctgttgcactcagtgcaggctaagagtgag
aaggacagcactgaggaacacatctcctggttttcacctgaggatcatgggtatggcacc
gaggctcctgcccagagcaaaccaccctcagagaagaagcttgagaaccaagacaagaga
cccgggaagccagaaaaacgtccctttcagatccgggaccaatatagagaccgtgattcc
gagtatatctgccaagaaaatgaacccgatggaatcttggaccaacagttgctggaagaa
ttgcaaaagaagaagacagatcttcggtatattgagatgcagcgttttagagaaaagctg
ccttcattcaggatgcggaaggagctggtgaatctgatcagtggccaccaggtcacagta
ataagtggcgagacgggctgtggcaagaccactcaggtcacccagttcatcctggatgac
tacattgagcgcggccagggatccatgtgccgcattgtgtgcacccagccccggaggatc
agtgccatctcagttgcagagagggtggctgcagaacgtgcagaatcctgtggaggtggc
aatagcacgggctaccagattcgcctgcagagccggctgccccggaagcagggctccatc
ctgtactgcaccacagggatcatcctccagtggctccagtcagatccgcgactagccagt
gtcagccacgtagtgctggatgagatccatgagcggaacctgcagtctgatgtgctaatg
acagtcattaaagatctgctcgtgttccggcctgacctgaaggtggttctgatgagtgca
acactgaatgctgagaagttctctgaatatttcggtaattgtccaatgatccacatccca
ggtttcacctttccagtggttgagtatcttttggaggacatcattgaaaaaataagatac
atccccaagcagaaggagcacagatcccaatctaagaggggcttcatgcaagggcatgtt
cacagacaggaaaaggaagagaaggaagccctgtacagagagcgctggcccagctacctg
aaagaattggagaaaaaatattctccaagtacagtcggggttctggaaatgatggatgat
gagaaagttgatctgaacttgatctctgaactgattcgatacattgttttggaagaagag
gatggtgcaatattggtctttctgcctggctgggacaatatcagcactttacatgacctg
ttgatgtcacaagtgatgtttaaatcagataagtttcttattatccctttacattcactg
atgcctacagttaaccagacccaggtgtttaaaaaaactcctcctggtgttcggaaaatt
gtcattgcgaccaacattgcagagacgagtatcaccatagatgatgttgtttatgtcatt
gatggtgggaagatcaaggagacgcactttgacacccagaacaacattagcatcatgtct
gcagagtgggtcagtaacgccaacgctaaacagaggaaaggccgtgctggcagggtccag
cccggccactgctatcacctgtacaatggcctccgagcaagcctgctggatgactaccag
ctgccagagattctcagaacccctctggaggagctctgcctgcagatcaagatcttaaag
ctcggaggtattgcagactttctgggcagactaatggatccgccatccaatgaggcagtg
tcacttgccatcaggcatctgattgaactgaccgctctagacaaagagcaagagctgaca
cccctgggggtgcacctggcccggttacctgtggagccacacattgggaagatgattctt
tttggagctttgttctgctgtctagaccctgtactcaccatcgctgccagcctcagcttc
aaggacccttttgtcattccattgggaaaagaaaagatcgccgatgcaaggagaaaggag
ttggcaaaggacacaaaaagtgaccacctgactgttgtgaatgcattcgagggctgggaa
gaagccaggcgccgaggtttccgttctgagaaggactattgctgggaatacttcctgtct
tccaacactctgcagatgctgcacaacatgaagacacagttcaccgagcatctcctagga
gctgggttcgtgagcagcagaaatccaaaagatccaaaatcaaacataaattcagataac
gagaagataatcaaagctgtgatctgtgctggtttatatcccaaagttgctaaaattcga
ctaaactctgggaaaaaacgaaaaacggtgaaagtatacaccgaatcagacggccttgtc
gctatccaccccaagtctgtgaacgtggagcagatggacttccactacaactggctcatc
taccatttgaagatgcggacgagcagtatctatttgtatgattgcacagaagtttcccca
tactgccttttgttctttgggggtgacatttccatccagaaagacaaggagcaggagacc
attgctgtggatcagtggattgtcttccagtctccagcaagaatcgcacatctcgtcaag
gaactgaggaaggagctggatgcccttctgcgggagaagatagagaatccccaccctgtg
gattggaaggatacagagtctagggactgtgctgtgctatctgccatcactgacctcatc
aagtcccaggagaaagcaacacccaggaatggtccatctcgtttccaggacagcagctac
tacagctga
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