Suncus etruscus (white-toothed pygmy shrew): 126011933
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Entry
126011933 CDS
T09902
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126011933 (SOX30)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126011933 (SOX30)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
126011933
NCBI-ProteinID:
XP_049631657
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Position
6:complement(120221889..120265574)
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AA seq
741 aa
AA seq
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MERARPEPPPPPRPTPRAAPPRPLRPAPPPLPPPPSFLDGSAFRAAAAELPRSPPGLCAA
ARGGDAAARRLLQVKTEQVLLLPPPPPPPRDEGPPALPFAHARMMPLRPDLLLLPPPPPP
SLPLPDGAPCRPDPHLHPHPLHIKAEQPEPGPRLDLDPVAARGRGGDDDDDDKGRWQPAD
GSSSDDLAEGGDGQARAAPCEGAAIKTEQPEPAPDGEPAPNGPLHGGQEVLLAPLPLPPP
PPPPPDLRIPLTLHPVPPGARIQFQAPPPPPPDVIRLAKVPLAPVPIKMQSLLEPSVKIE
TKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISV
QLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFPGTTQ
NIVSTNPTTIYPYRSPTYSVVIPSLQNTITQPVGDAAPAIQLPTPTVQRPSPITLFQPSV
TSAAQVSVQPPSLPLRPAPSPQRYVGPSQTDPHRLHPGASHPPVKRPTPVSLESTSRIPT
SASTAHARFAASTPQPPKEYSSISACPRGTPVPMPHSHVYQPSPLGHPASLFGTPPRFSF
HHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAMFSALNRDYPF
RDYPEERVHNEDSRSCESMDGSSYYNGNSHSAEEYLSPMPQMDIGALENVFTAPTSASST
IQQVNVTDSDEEEEEKVLRNL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcccggcccgagccgccgccgccgccgcgcccgacgcccagggcggctccg
cctcgcccgctgcgccccgcgccgccgccgctaccgccaccgccgtccttcctcgacggc
agcgcctttcgggccgccgcagccgagctcccgcggtcgccgcccggcctgtgcgcggcc
gctcgaggtggagacgcggcggcacggcgcctgctgcaggtgaagacggagcaggtactg
ctactgccgccgccgccgccgccgcccagggacgagggcccccccgcgctgccctttgcg
catgcgcggatgatgccgctccggcccgacctgctgctgctgccgccgccgccgccgccg
tccctgcccctgcccgacggcgccccctgcaggccagacccgcacttgcacccgcaccca
ctgcacatcaaggccgagcagcccgagccgggcccccgcctggacctggatccggtggca
gcgcggggccgcggaggagacgacgacgacgacgacaagggccgctggcagccggccgac
ggatcctccagcgacgacctggcggaaggcggcgacggccaggcccgggccgccccctgc
gaaggcgcggccatcaagaccgagcagccggagccggcccccgacggggagcccgcgccc
aatgggcccctgcacggcggccaggaggtgctgctggccccgctgccgttgccgccgccg
ccgccgcccccgccggacctccgcatcccgctcacgctccacccggtgccccctggagct
cggatccagttccaggccccgccgccgccgccccccgacgtgatccgcctggccaaggtg
cccctggcccccgtgcccatcaagatgcagtccctgcttgagccctcggtgaagatcgag
accaaggacgtccccctcactgtgctgccctccgacgcaggaataccagatactcccttc
agtaaggacagaaatggtcacgtgaagcgacccatgaatgcgtttatggtttgggcaaga
atccaccggccagcattagccaaagctaacccagctgccaacaatgcagaaatcagtgtc
cagctcggcttagagtggaacaaacttagtgaagaacaaaagaaaccttattatgatgaa
gcgcaaaagattaaagaaaagcacagagaggaatttcctggatgggtttaccagcctcgt
ccaggaaagcgaaaacgctttcctttaagtgtttccaatgtgtttcctggtaccacacag
aatattgtctctacaaatcctacaacaatctacccgtaccgctcacctacctactctgtg
gtgattcccagcctacagaacaccatcactcagccagttggtgacgcagcccctgctatc
cagctgcccacacctacagtccagcgccccagtcccatcacactgttccagcccagcgtc
accagtgctgcccaggtgtctgtccagcctcccagtctgcccctgcgaccggcaccttca
ccccagcgctatgtggggccctcccagacggaccctcaccggctgcatcctggagccagc
cacccccctgtgaagaggcccaccccagtgtctctggagagcaccagccggattccaacc
agtgccagcactgcccatgccagatttgctgcctccaccccccagcctcccaaggagtac
tccagtatctcggcttgtccccggggcacgcctgtgcccatgccccactcccacgtctac
cagccctctcccctgggccaccctgcctcgctgtttgggaccccaccgcgcttctctttt
catcacccttacttccttcccggaccacactacttcccatcaagcacatgcccttacagt
cggcctccctttggctatggaaattttccaagttcaatgccagaatgccttggttattat
gaagacaggtaccaaaaacacgaagctatgttttcagctttaaacagagactatcctttt
agagactatccagaggaacgtgtgcacaatgaagattctcgaagttgtgagagcatggat
ggaagctcttactataacggtaacagccatagtgcggaggagtacctaagccccatgcct
caaatggacattggtgccttagagaatgtctttacagctccaacatctgcttcttccacc
atccagcaagtcaatgtcactgatagtgatgaggaagaagaagaaaaagtgctcaggaat
ttataa
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