Suncus etruscus (white-toothed pygmy shrew): 126012056
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Entry
126012056 CDS
T09902
Symbol
FXR1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126012056 (FXR1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126012056 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
126012056 (FXR1)
mRNA cycle factors
Stress granule specific factors
126012056 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
126012056
NCBI-ProteinID:
XP_049631805
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Position
6:90592434..90660095
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AA seq
650 aa
AA seq
DB search
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFIVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYATDESTVSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIE
EHGPSEKAINGPTSASGDEISKLQRTPGEEKINTLKEENTQEAAVLNGVS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgtggctccaacggggctttctacaagggatttatt
aaagatgttcatgaagactctctcacagttgtttttgaaaacaattggcagccagaacgc
caggttccatttaatgaagttagattaccgccaccacctgatattaaaaaagagattagt
gaaggagatgaagtagaggtttattcaagagcaaatgatcaagaaccatgtggatggtgg
ttggctaaagttcgaatgatgaaaggagaattttatgtcattgaatatgctgcttgtgat
gctacttacaatgaaatagtcacatttgaacgacttcgacctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaaatgcacggtggatgttcctgaggatttgagagaggcg
tgtgctaatgaaaatgcacataaagattttaagaaagcagtaggagcttgcagaattttt
taccatccagaaaccacacagctaatgatactgtctgccagtgaagcaactgtgaaaaga
gtaaatatattaagtgacatgcatttgcgaagtattcgcaccaaattgatgcttatgtcc
agaaatgaggaagccactaagcatttagaatgcacaaaacaacttgcagcagcttttcat
gaggaatttattgtacgagaagatttgatgggtctggcaataggaacacatggtagtaat
atacagcaagctaggaaggttcctggagttacagctattgaactagatgaagatactgga
acatttcgaatctatggagagagtgctgatgctgtaaaaaaggctagaggtttcttggaa
tttgtggaggattttattcaggttcctaggaatctggttggaaaagtaattggaaaaaat
ggcaaagttattcaagaaattgtggacaaatctggtgtagttcgggtgagaattgaaggg
gacaatgaaaataagctcccaagagaagatgggatggttccatttgtatttgttggcact
aaagaaagcattggaaatgttcaagttcttttagaatatcacattgcctatttaaaggaa
gtagaacaactaagaatggaacgcctacagattgatgaacagctacgacagattggtatg
ggtttcagaccttcttccaccagagggcctgaaaaagagaaaggatatgccactgatgaa
agtaccgtctcttctgtacaaggttctaggtcttatagtggaagaggcagaggtcgtcgg
ggccctaattacacctccggttatggtacaaattctgagctgtctaacccctctgaaaca
gaatctgaacgtaaagatgagctgagtgattggtcattggcaggagaagatgatcgagag
agccgacatcagcgtgacagcaggagacgcccaggtggaagaggcagaagtgtttctggg
ggtcgaggtcgtggtggaccacgtggtggcaaatcctccatcagttccgtgctcaaagat
ccagacagcaatccatacagcttacttgataataccgaatcagatcagactgcagacact
gatgccagcgaatcccatcatagtactaaccgtcgtaggcggtctcgtagacgaaggact
gatgaagatgctgttctgatggatggaatgactgaatctgatacagcttcggttaatgaa
aacgggctagtcacagttgcagattatatttctagagctgagtctcagagcagacaaaga
aacctcccaagggaaactttggctaaaaacaagaaagaaatggcaaaagatgtgattgaa
gagcatggtccttcagaaaaggcaataaatggcccaactagtgcttctggcgatgaaatt
tccaagctacaacgtactccaggagaagaaaagataaataccttaaaagaagaaaacact
caagaagcagcagtcctgaatggtgtttcataa
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