Suncus etruscus (white-toothed pygmy shrew): 126012079
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Entry
126012079 CDS
T09902
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04390
Hippo signaling pathway
setr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
126012079 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
126012079 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126012079 (SOX2)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126012079 (SOX2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
126012079
NCBI-ProteinID:
XP_049631840
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All DBs
Position
6:91552351..91553347
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AA seq
321 aa
AA seq
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MYNMMETELKPPGPQQSSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQE
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgcccggcccgcagcaaagttcggggggc
ggcggcggcggcggcggcggcaactccacggcggcggccgcgggcggcaaccagaagaac
agcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggc
gccgagtggaaacttttgtcggagaccgagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgctcatgaagaaggataagtacacgctgccgggcggcctgctggccccggggggc
aacagcatggccagcggggtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggag
cagctgggctacccgcagcacccgggcctcaacgcgcacggcgcggcgcagatgcagccc
atgcaccgctacgacgtgagcgccttgcagtacaactccatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctactcgcagcagggcaccccgggcatggcg
ctgggctccatgggctccgtggtcaagtccgaggccagctccagcccccccgtggtcacc
tcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatg
tacctccccggcgccgaggtgccggaacccgccgcccccagcagactgcacatgtcccag
cactaccagagcggcccggtgcccggcacggccatcaacggcacactgcccctctcgcac
atgtga
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integrated database retrieval system
