KEGG   Suncus etruscus (white-toothed pygmy shrew): 126012100
Entry
126012100         CDS       T09902                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03020  RNA polymerase
setr03420  Nucleotide excision repair
setr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126012100
  09124 Replication and repair
   03420 Nucleotide excision repair
    126012100
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    126012100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:setr03021]
    126012100
   03400 DNA repair and recombination proteins [BR:setr03400]
    126012100
Transcription machinery [BR:setr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     126012100
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126012100
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 126012100
NCBI-ProteinID: XP_049631864
LinkDB
Position
6:90125574..90125957
AA seq 127 aa
MAAGSCDPCTGNLEDASQVIFPKGFQTAVTLLNPEVLHLLLEHQKLQNESVENEHNFPWS
SNKRSTLQPVSVVSQTVASVRPFLLQKKLREFELACLATLCPGTAEESKALIPSLESGLK
IRAPTDS
NT seq 384 nt   +upstreamnt  +downstreamnt
atggcggctggcagttgtgacccgtgtactggcaacttggaagatgcttcccaggtcatc
tttcccaaagggtttcaaacagccgtgactcttctaaatccagaagttcttcatctgctt
ttggagcatcagaagctgcagaacgagagtgttgagaatgaacataacttcccttggtct
tcaaataaacgttccactctacagccggtttcagtcgtttcacagaccgttgccagtgtt
cgtcctttcttgctacagaaaaagcttcgcgagtttgagctggcatgtttggccaccctt
tgcccaggaactgctgaggagtccaaggctctgatcccaagcctcgagagcggtttgaag
ataagagctccaacagattcttga

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