KEGG   Suncus etruscus (white-toothed pygmy shrew): 126012176
Entry
126012176         CDS       T09902                                 
Symbol
CLDN1
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03272  Virion - Hepatitis viruses
setr04382  Cornified envelope formation
setr04514  Cell adhesion molecules
setr04530  Tight junction
setr04670  Leukocyte transendothelial migration
setr05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    126012176 (CLDN1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    126012176 (CLDN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    126012176 (CLDN1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    126012176 (CLDN1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    126012176 (CLDN1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    126012176 (CLDN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:setr03037]
    126012176 (CLDN1)
   04147 Exosome [BR:setr04147]
    126012176 (CLDN1)
Cilium and associated proteins [BR:setr03037]
 Other cilia and associated proteins
  Stereociliary proteins
   126012176 (CLDN1)
Exosome [BR:setr04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   126012176 (CLDN1)
  Exosomal proteins of colorectal cancer cells
   126012176 (CLDN1)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Voltage_CLC DUF7702 CD20 SLAC1 Cytochrom_B_C DUF2207_C SUR7 DUF4064 DUF3784 Amastin DUF7319 DUF898 DUF4134 TMEM_230_134 DUF4282 DUF6594 TMEM174
Other DBs
NCBI-GeneID: 126012176
NCBI-ProteinID: XP_049631964
LinkDB
Position
6:110467143..110481191
AA seq 211 aa
MANAGLQLLGFVLAFLGWIAAIVSTALPQWRIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKVFDSLLNLDSTLQATRALMVIGIILGVIAICISIVGMKCMKCMEDDEVQKMRMAV
IGGVMFLIVGLLLLVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGG
LLCCSCPRKTTSYPTPRPYPKPAPSTGKDYV
NT seq 636 nt   +upstreamnt  +downstreamnt
atggccaacgcggggctgcagctgctgggcttcgtcctggccttcctgggctggatcgcg
gctatcgtgagcacggcgctaccccagtggcggatctactcctacgccggtgacaacatc
gtgacggcccaggccatctacgaggggctctggatgtcctgcgtgagccagagcaccggg
cagatccagtgcaaggtcttcgactccttgctcaacctggacagtactttgcaggcaact
cgtgctttgatggtaattggaattatcttgggagtaatagccatctgtatatccattgtt
ggcatgaagtgtatgaagtgcatggaagatgatgaggtgcagaagatgcgaatggctgtt
attgggggtgttatgtttcttattgtaggtctgcttctattagtggccacagcttggtat
ggcaatagaattgttcaagaattctatgacccaatgacaccagtcaatgccaggtatgaa
tttggtcaggccctgttcactggctgggctgctgcttctctctgccttttgggcggtggc
ctactttgctgctcctgtcccagaaaaacaacatcttacccaacaccaaggccctatcct
aagcctgcaccttccactgggaaagactatgtgtga

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