Suncus etruscus (white-toothed pygmy shrew): 126012186
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Entry
126012186 CDS
T09902
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126012186 (NCBP2)
09122 Translation
03013 Nucleocytoplasmic transport
126012186 (NCBP2)
03015 mRNA surveillance pathway
126012186 (NCBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126012186 (NCBP2)
03041 Spliceosome [BR:
setr03041
]
126012186 (NCBP2)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
126012186 (NCBP2)
Spliceosome [BR:
setr03041
]
Common components
Common spliceosomal components
Cap binding complex
126012186 (NCBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
126012186
NCBI-ProteinID:
XP_049631977
LinkDB
All DBs
Position
6:complement(104687089..104698734)
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AA seq
156 aa
AA seq
DB search
MSGGLLKALRSDSYVELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELF
SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK
EGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKLAQNQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcctcctgaaggcgctgcgcagcgattcgtacgtggagctcagccagtac
cgggaccagcacttccggggtgacaatgaagaacaggaaaaattactgaagaagagctgt
acattatatgttggaaacctttccttttatacaactgaagaacaaatatatgaactcttc
agcaaaagtggtgacataaagaaaatcattatgggcttggataaaatgaagaagactgca
tgtgggttctgctttgtggaatactactcaagagcagatgcagaaaatgccatgcggtac
atcaatggaactcgtctggatgaccgaatcattcgcacagactgggatgcaggctttaag
gagggcaggcagtatggacgtgggcgatctgggggccaggtacgagatgagtatcggcaa
gactatgatgctgggagaggcggctatggaaaactggcccaaaaccaatga
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