Suncus etruscus (white-toothed pygmy shrew): 126013316
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Entry
126013316 CDS
T09902
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082
ATP-dependent chromatin remodeling
setr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126013316 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126013316 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126013316 (SS18L1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126013316 (SS18L1)
GBAF(ncBAF) complex
126013316 (SS18L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
126013316
NCBI-ProteinID:
XP_049632309
LinkDB
All DBs
Position
7:9011435..9028555
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRAKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQALHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQGSSGQGLHSQGSLSDAIGSGLPPASLMQ
GQIGNGPNHVPMQQTAPSTLPTTSMSMSGSSHGTGPGYSHAGPSQSVSLQGQGAMGSYVS
RANINMQSNPVSMMHQQAASSHYSSAQGGSQHYQNQSALAMMGPGGQGSSLMSQRPLAPY
RPSQQGSSQQYLGQEEYYSGEQYGHGQAASEPMSQQYYPDGHSEYAYQQPSYTEQSYDRA
FEESTQHYYEGGNSQYSQQQAGYQQGTAPQQAGYQQQYPSQQSYPGQQSGYGPAQGAPAQ
YSSYQQGQGQQYGSYRAAQSGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcaaggccccgcgccaaaggcgaggtcacgcagcagacc
atccagaagatgctggatgagaaccatcatctgatccagtgcatcctggagtaccagagc
aagggcaagacggccgagtgcacccagtaccagcaggccctgcaccggaacctggtctac
ctagccaccattgcagactccaaccagaacatgcaatccttgctccctgccccgccaacc
cagaacatgaatctgggcccaggggcgctgtcccaaggcagctcgggccagggccttcac
tctcagggctccctcagcgacgccatcggctccggtctgccaccagcctccctcatgcag
ggccagatcggcaatggtcccaaccacgtgcccatgcagcagacggcccccagcacgctg
cccaccacctccatgagtatgtcgggcagcagccacggcaccgggccaggctacagccat
gcgggcccctcgcagagtgtgtccctgcagggtcagggtgccatgggtagctacgtgtcc
cgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcctca
tcccactacagctcggcgcagggtggcagccagcactaccagaaccagtcagccctggcc
atgatgggccctggagggcagggcagcagcctgatgagccagcgacccctggcaccctac
cggccctcgcagcaaggctcatcccagcagtacctgggccaagaggagtattacagcggc
gagcaatatggccatggccaggcagcctcggagcccatgagccagcagtactatcctgat
gggcacagcgagtacgcctatcagcagccatcctacacggagcagagctacgaccgcgcc
ttcgaggagtccacacagcactactacgagggtggcaactcccagtacagccagcagcaa
gcgggctaccagcagggcacagccccgcagcaggccggctaccagcagcagtacccgagc
cagcagagctaccctgggcagcagtcaggatacggcccggcacagggcgcccctgcccag
tactccagctaccagcagggccaaggccagcagtacggaagctaccgagcagcccagagt
ggcccctccgcccagcagcagcggccttacggctacgagcagggccagtatgggaactac
cagcagtaa
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integrated database retrieval system
