KEGG   Suncus etruscus (white-toothed pygmy shrew): 126013319
Entry
126013319         CDS       T09902                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1
  KO
K14298  mRNA export factor
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013  Nucleocytoplasmic transport
setr05014  Amyotrophic lateral sclerosis
setr05164  Influenza A
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126013319 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    126013319 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    126013319 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:setr03019]
    126013319 (RAE1)
   03036 Chromosome and associated proteins [BR:setr03036]
    126013319 (RAE1)
Messenger RNA biogenesis [BR:setr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     126013319 (RAE1)
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    126013319 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WDR55 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 126013319
NCBI-ProteinID: XP_049632313
LinkDB
Position
7:complement(7823506..7835468)
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPANFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVTY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtttgttcgggacaacctcgggctttggaaccagcgggaccagcatgtttggcagc
accaccacggacaatcacaacccgatgaaggatattgaagtcacatcgtctccagatgac
agcatcggctgcctgtccttcagcccacccaccctgcctgccaacttcctcatcgctggc
tcctgggccaacgacgtgcgctgctgggaagttcaagacaatgggcagacgatcccgaaa
gcccagcagatgcacacggggccggtgctcgatgtctgctggagcgacgatgggagcaaa
gtgtttacggcatcgtgtgacaaaactgccaaaatgtgggacctcaacagtaaccaggcg
atccagattgcccagcatgatgcacccgtgaagaccatccattggatcaaggcccccaac
tacagctgcgtgatgactgggagctgggacaagaccctgaagttctgggacacacggtcc
tccaaccccatgatggttctgcagctcccggaaaggtgctactgtgctgacgtgacgtac
cccatggccgtggtggccacggccgagcgtggcctgatagtctaccagctggagaaccag
ccttccgagttccggcgaatcgaatcgcctctgaagcaccagcatcggtgcgtggctatc
tttaaggacaagcagaacaagccgaccggctttgccctgggcagcatcgaggggagagtc
gctattcactacatcaaccccccgaaccctgccaaggacaacttcaccttcaagtgccac
cggtccaacggcaccaacacttctgccccacaagacatctacgcggtcaacggcattgct
ttccatccggtccatggcacgctggccaccgtgggctccgacggccgcttcagcttctgg
gacaaggacgcacgcaccaagctcaagacctcggagcagctggaccagcccatcgccgcc
tgttgcttcaaccacaacgggaacatctttgcctacgcctccagctacgactggtccaag
ggacacgaattttataacccccaaaagaagaactacattttcctgcggaatgcagctgag
gagctgaagcccaggaataagaagtag

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