Suncus etruscus (white-toothed pygmy shrew): 126013373
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Entry
126013373 CDS
T09902
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126013373 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126013373 (HNRNPU)
Spliceosome [BR:
setr03041
]
Common components
Common spliceosomal components
hnRNP proteins
126013373 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
AAA_17
AAA_18
Motif
Other DBs
NCBI-GeneID:
126013373
NCBI-ProteinID:
XP_049632397
LinkDB
All DBs
Position
7:46941533..46953632
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AA seq
815 aa
AA seq
DB search
MSSSPINVKKLKVSELKEELKKRRLSDKGLKADLMERLQAALDEEAAGGRPGLEPGNGSL
ELGGEAAGRAGAGLEREAAAGGDDDDEEEDEDEEGIAALDGDQMELGEENGAAGAAGAAG
AGEEDDEGASEDENGDDQGFQEGEDELGDDDDAAGDENGHGERPAQPPAAPQPQPPQAQA
QPPQPRGPNKEAAAAKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKRGVKRP
REDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSAS
SLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSG
MLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLG
IAFKISKEVLAERPLFPHVLCHNCAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPK
GPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADT
GKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPK
DEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQY
KEESKKALPPEKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGG
YNRRGNMPQRGGGGGSGGIGYPYPRGPVFPSRGGYSNRGNYNRGGMPNRGNYNQNFRGRG
NNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtcgcccatcaacgtcaagaagctcaaggtgtcggagctcaaggaggagctc
aagaagcggcgcctgtcggacaagggcctcaaggccgacctcatggagcgcctgcaggcc
gcgctggacgaggaggcggcgggcgggcggcccggcctggagcccgggaacggcagcctg
gagctgggcggcgaggcggcgggccgcgcgggcgccgggctggagcgcgaggcggcggcg
ggcggcgacgacgacgacgaggaggaggacgaggacgaggagggcatcgccgcgctggac
ggcgaccagatggagctgggcgaggagaacggcgcggcgggggcggccggcgcggcgggc
gccggcgaggaggacgacgagggcgcgtcggaggacgagaacggcgacgaccagggcttc
caggagggcgaggacgagctgggcgacgacgacgacgcggcgggcgacgagaacggccac
ggggagcgcccggcgcagccgcccgcggcgccccagccgcagcccccgcaggcgcaggcg
cagcccccgcagccgcgcggcccaaacaaggaggcggcggccgccaagagcagcggcccc
acctcgctcttcgccgtcaccgtggcgccgcccggggcccggcagggccagcagcaggcg
ggaggagacggcaaaactgaacaaaaaggcggcgataaaaagagaggcgttaagagaccc
cgagaagatcatggccgtggctattttgagtacattgaagagaacaagtatagcagagcc
aagtcccctcagccacctgttgaagaagaagacgaacatttcgacgacacagtggtttgt
cttgatacttataattgcgatttgcattttaaaatatcaagagatcgtctgagtgcatct
tctcttactatggaaagttttgctttcctttgggctggaggaagggcatcttacggtgtg
tcaaaaggcaaagtctgttttgagatgaaggttactgagaagatacctgtaaggcattta
tatacaaaagatattgacatacatgaggttcggatcggttggtcactaaccacaagtgga
atgttacttggtgaagaagagttttcttatgggtattctttaaaagggattaaaacatgc
aactgtgagactgaagattatggagagaagtttgatgaaaatgatgtgattacatgtttt
gctaactttgaaagtgatgaagtggaactctcgtatgccaagaatggacaagatcttggc
attgccttcaaaattagtaaggaagttcttgctgaacggccactctttccacacgttctc
tgccataactgtgcagttgaatttaatttcggtcagaaggaaaagccatatttcccgatt
cctgaagattatacttttatccagaatgttcccttagaggatcgagttagagggccaaag
gggcctgaagagaagaaagattgtgaggttgttatgatgattggcttgccaggagctgga
aaaactacctgggttactaaacatgcagcagaaaaccctggtaaatacaacattcttgga
acaaataccataatggataaaatgatggtggcaggttttaagaagcaaatggcagatact
ggaaaactgaacacacttctgcagagagctccacagtgtcttggaaagtttattgagatt
gctgcccgcaagaaacgaaatttcattctggatcagacaaatgtgtctgctgctgcccag
aggagaaaaatgtgcctgtttgcaggttttcagcgaaaagctgttgtagtttgtccaaaa
gatgaagactataagcaaagaacacagaagaaagcagaagtagagggaaaagacttacca
gaacatgcagtcctcaaaatgaaaggaaactttacgctgccagaggtagctgagtgtttt
gatgaaataacatatgttgaacttcagaaagaggaagcccaaaaacttctggagcaatac
aaggaagaaagcaagaaagctcttcctccagaaaagaaacagaatactggttctaagaag
agcaataaaaacaagagtggcaagaaccagtttaatagaggaggtggccatagaggacgt
ggtggattcaatatgcgtggtgggaatttcagaggaggagctcctggtaaccgtggagga
tataacaggaggggcaatatgccacagagaggtggtggtggtggaagtggtggaattggc
tatccataccctcgcggccctgttttccccagccgaggcggttactcaaacagagggaac
tacaacagaggtggaatgcccaacagagggaattacaaccagaatttcagaggacgagga
aacaatcgtggctacaaaaatcaatctcagggctacaaccagtggcagcagggtcaattc
tggggtcagaagccatggagtcagcattatcaccaaggatattattga
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