Suncus etruscus (white-toothed pygmy shrew): 126013480
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Entry
126013480 CDS
T09902
Symbol
PRRX1
Name
(RefSeq) paired mesoderm homeobox protein 1
KO
K09329
paired mesoderm homeobox protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126013480 (PRRX1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
126013480 (PRRX1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
126013480
NCBI-ProteinID:
XP_049632555
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Position
7:59305364..59354659
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AA seq
245 aa
AA seq
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MTSSYGHVLERQPALGGRLDSPGNLDTLQAKKNFSVSHLLDLEEAGDMVAAQADDSVGEA
GRSLLESPGLTSGSDTPLPDNDQLNSEDKKKRKQRRNRTTFNSSQLQALERVFERTHYPD
AFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNVSLLKSYSGEVAAVEQPIV
PRPAPRPTDYLSWGTASPYSAMVTYSATCANHSPAQGIHMANSIANLRLKAKEYSLQRNQ
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacctccagctacggacacgttctggagcggcagccggcgctgggcggccgcctggac
agtcccggcaacctggacacgctgcaggccaagaagaacttctccgtgagccacctgcta
gacctggaggaggccggggacatggtggcggcgcaggcggacgacagcgtgggcgaggcg
ggccggagcctgctcgagtcgccggggctgaccagcggcagcgacacgccgctgccggac
aatgatcagctcaactcggaggataagaagaagaggaagcagcggcggaacaggaccacg
ttcaacagcagccagctgcaggcactggagcgggtcttcgagaggacacactaccctgac
gccttcgtgcgcgaggatcttgcccgccgagtcaacctcacagaagccagagtgcaggtg
tggtttcagaaccgaagggccaagttccgcaggaatgagcgagccatgctggccaataag
aacgtttccctgctcaagtcctactcgggtgaagtggcagctgtggaacagcccatcgtg
ccccgtccagctcccagacccaccgattacttgtcctgggggactgcttctccatacagt
gccatggtcacttactctgccacatgcgccaaccatagccctgcccagggcatccacatg
gccaacagcattgccaacctgagactgaaggccaaggaatatagtttacagaggaaccag
gtgccaacagtgaactga
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