Suncus etruscus (white-toothed pygmy shrew): 126013529
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Entry
126013529 CDS
T09902
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04010
MAPK signaling pathway
setr04020
Calcium signaling pathway
setr04930
Type II diabetes mellitus
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
126013529 (CACNA1E)
04020 Calcium signaling pathway
126013529 (CACNA1E)
09160 Human Diseases
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
126013529 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126013529 (CACNA1E)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
126013529 (CACNA1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
126013529
NCBI-ProteinID:
XP_049632604
LinkDB
All DBs
Position
7:complement(54262446..54386323)
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AA seq
2234 aa
AA seq
DB search
MARFGEAVVGRPASGDGDSDQSRNRPGTPVQASGQAAAYKQTKAQRARTMALYNPIPVRQ
NCFTVNRSLFIFGEDNVVRKYAKKLTDWPPFEYMILATIIANCIVLALEQHLPEDDKTPM
SRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHF
NTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHRACFTNTSGILEGFDPPHPCGVQGCPAGYECRDWIGPNDGITQFDNILFAVL
TVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERER
VENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNAGTSALEVLRRATIKRSRT
EAITRESSDEHCMDISSVGTPLARASIRSTKVDGASYLRHKERLLRISVRHMVKSQIFYW
IVLSLVALNTACVAIVHHNQPQWLTHMLYYAEFLFLGLFLLEMALKMYGLGPRLYFHSSF
NCFDFGVTVGSIFEVIWAIFRPGTSFGISVMRALRLLRIFKITKYWASLRNLVVSLMSSM
KSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWN
EVMYNGIRSQGGVSSGMWSAVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEE
EAFNQKHMLQKAKEVSPMSAPSLPAIERERRRRHHMSVWEQRTSQLRRHMQMSSQEALNK
GEGPPMNPLNPLNPLSPLNPLNAHPSLYRRPRPLDGLSLGRCDEEHSGRGGSLKATIGDH
PHSPLALSRREPPWLARPCQGNCESSPAEAGGGGGGSSGSNEPTVTFEDRARHRQSQRRS
RHHRRVRLEGRDPASTSRSRSASQERSLDEAGPADADLEARGPHGTKEPPILEEERSQDL
RRSSSLMVPGGTGLTQALEVAENPLAQPQADTEAGKDAEGNSKQALLADVQLDMGRGISQ
SEPDLSCATSTTDRPATESTSVTVAIPDVGPLVESTVVHMSNKTDGEASPLKGTEIPEEE
EEEEEEEEEEGAEKKKKKKKKQTGKAMVPHSSMFIFSTTNPIRRACHYIVNLRYFEMCIL
LVIAASSIALAAEDPVLTNSERNRVLRYFDYVFTGVFTFEMIIKMIDQGLILQDGSYFRD
LWNILDFVVVVGALVAFALASALGTNKARDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFD
CVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYVDHEKNK
MEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMS
IFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRHM
PQSRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTLV
FSLECVLKVIAFGFLNYFRDTWNIFDFITVVGSITEIVLTDSKLVNTSGFNMSFLKLFRA
ARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESHI
NRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDTSAPAGPPGQERCGTDLAY
VYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIH
YTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIK
IAKGGADRQQLDSELQKETLTIWPNLSQKMLDLLVPMPKASELTVGKIYAAMMIMDYYKQ
SKIKKQRQQLEEQKNAPMFQRMEPSSLPEEIVANARALPYLQQDPMASLGRGYVPTSPLS
ARERLQLACMDDEEQEQESLEPEVSAVGSYLPVDTQHRAGSGKAASMPRLTVDPQVLDPS
SMRRSFSTIRDKRSGTSWLEEFSMERSSENTYRSRRRSYHSSLRLNVDAGHKSESLRGGR
ERGRSKERKHLLSPDVSRCNSEERGAQADSESPEHRPSRSPSEGRVGTPSRKGAGSFSES
STPSVSDTSTPRRGRRQLPPVPPKPRPLLTYGSAQGSQEGSPLAVGCASSSPQRYISEPY
LAGPEDTQASDCGEEETLTFEAAVATSLGRANTIGSAPPLRHSWQMPNGHYRRRRRLCGA
AGDLLSDTEEDDRC
NT seq
6705 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggggaggcggtggtcggccggccggcctcgggcgacggcgattcggac
cagagtcggaaccggccgggaactcccgtgcaggcgtcgggccaggcggccgcttacaag
cagaccaaggcgcagcgggcgcgcaccatggccctgtacaaccccatcccggtccggcag
aactgcttcaccgtcaacagatccctcttcatcttcggcgaggacaacgtggtcaggaaa
tacgccaagaagctcaccgattggccgccattcgagtacatgatactggccaccatcatc
gccaactgcatcgtcctggccctggagcagcatctgccagaggatgacaagactccgatg
tccaggagactggagaagacagagccgtacttcattggcattttctgctttgaggctggc
atcaaaattgtggccctgggcttcatcttccacaagggctcctacctgcgcaatggttgg
aacgtcatggacttcatcgtggtcctcagtggcatcctggccacagcgggcacccacttc
aacacacatgtggacctgaggaccctgcgggccgtgcgggtcctgagacccttaaagctg
gtgtctgggatccctagcttgcagattgtgctcaagtccatcatgaaggccatggtgccg
ctactgcagatcggcctgctgctcttctttgctatcctcatgttcgccatcatcggcctg
gagttctacagcgggaaactgcatcgcgcctgcttcactaacacatcagggatcctggaa
gggttcgacccccctcacccatgtggcgtgcagggctgccccgcgggctacgagtgccga
gactggattggacccaacgacggcatcacgcagttcgacaacattctgttcgctgtgctc
acggtgttccagtgtatcaccatggagggctggaccacggtgctctacaataccaatgat
gccttaggcgccacctggaactggctctacttcatccccctcatcatcatcgggtccttc
ttcgtgctcaaccttgtcctgggagtgctgtctggggaattcgccaaggagagagaaagg
gtggagaaccgcagggccttcatgaagctgcggcgacagcagcagattgagcgagagctc
aatggctaccgagcctggatcgacaaggcagaggaggttatgctggcggaggaaaacaag
aacgcaggcacctcggctttggaagtgctccgcagagccaccatcaagaggagccggaca
gaggccataacccgagagtccagcgatgaacactgcatggacatttcctctgtgggcacg
cccttggcccgtgccagcatccggagcaccaaggtggatggcgcctcctacctgcgccac
aaagagcggctacttcgtatctctgtgcgccacatggtcaagtcccagatcttctactgg
attgtgctcagcctggtagcgctcaacacggcctgcgtggccatcgtgcaccacaaccag
ccacagtggctcacacacatgctctactatgctgagttcctgtttctcggcctcttcctc
ctggagatggccctgaagatgtacgggctggggccacggctctacttccactcatccttc
aactgcttcgactttggggtcaccgtgggcagtatcttcgaggtgatctgggctatcttc
cgcccgggcacttcttttggtatcagtgtcatgcgcgccctgcggctgctccgaatattc
aagatcaccaagtactgggcctccctgcgcaaccttgtggtctccctgatgagctccatg
aagtccatcatcagtttgctcttcctcctcttccttttcatcgtggtctttgccctctta
gggatgcaactatttgggggtcggttcaacttcaatgacgggacaccctcggcaaacttt
gataccttccctgccgctattatgaccgtgttccagatcctgacaggcgaggactggaat
gaggtgatgtacaatggcatccgctctcaaggcggcgtgagctcgggcatgtggtcagct
gtctacttcatcgtgctcaccctctttgggaactacacgctgctgaatgtcttcttggcc
atcgctgtggataacctggccaacgcccaggagctcaccaaggatgagcaggaggaggaa
gaggcgttcaaccagaagcacatgttgcagaaggccaaggaggtcagccctatgtcggca
cccagcctgcccgccatcgagagggagcggcggcggcggcaccacatgtcggtgtgggaa
cagcgcacgagtcagctgcgcaggcacatgcagatgtcgagccaggaggccctcaacaag
ggtgaaggcccgcccatgaaccccctcaaccccctcaacccgctgagccctctcaaccca
ctgaatgcccaccccagcctgtaccggaggcctcggcccctggacggcctgagtctgggc
cgttgtgatgaggagcacagcggccgtggggggtccctcaaggccaccattggggaccat
ccacacagccccctggctctgagcaggcgggagccaccctggctggcccgaccctgccag
gggaactgcgagtccagcccagccgaggctggcggcggcggtggtggcagcagtggcagc
aatgagccgacagtgaccttcgaggaccgcgcacggcaccgccagagccagaggcgcagc
cgccatcaccgccgtgtgaggctcgagggccgggaccctgcatccacctcccgcagccgc
tcggccagtcaggagcgaagcctggatgaagctggtcctgctgatgccgacctggaggct
cggggtccccacgggaccaaggagcccccgatcctggaggaggagagaagccaggatctg
cgaaggtccagcagcctgatggtaccgggaggcactgggctgacccaagccctggaggtg
gccgagaaccccctggcacagcctcaggcggacacagaggcagggaaggatgcggagggc
aacagcaaacaggctctgctggccgatgtgcagctggacatgggccgtggcatcagccag
agtgagccggatctgtcgtgtgccaccagcaccacagaccgacctgccaccgagagcacc
agcgtcaccgtggccattcccgatgtggggcccctggtggagtccaccgtggtgcacatg
agcaacaaaacagatggtgaggccagtcccctaaaggggactgagatccccgaggaagaa
gaagaggaggaggaagaggaggaggaagagggggcagagaagaagaagaaaaagaaaaaa
aagcagacaggcaaagccatggtacctcacagttccatgttcatcttcagcaccaccaac
ccgatccgcagagcctgtcactacatcgtcaacctgcggtacttcgagatgtgcatcttg
ctggtgattgcggccagcagcatcgccctggcagctgaggaccctgtcctcaccaactcg
gagcgcaacagggttctgcggtacttcgactatgtcttcactggtgtattcacctttgag
atgatcatcaagatgatcgaccagggactgattctgcaggacgggtcctacttccgggac
ctgtggaacattctggactttgtggtggtggttggcgctttggtggcctttgctttggcg
agcgctctgggcaccaacaaggcccgcgatatcaagaccatcaagtcactgcgggtgctc
cgggtgttgcggccactgaagaccatcaagcggcttcccaagctcaaggctgtgtttgac
tgcgtggtcacctccctaaagaatgtcttcaacatcctcattgtctacaagctcttcatg
ttcatctttgccgtcatcgctgtgcagctgttcaagggcaaattcttctactgcactgac
agctccaaagacacagagaaggagtgcataggcaactatgtggaccatgagaagaataag
atggaggtgaagggccgcgagtggaagcgccacgaatttcactacgacaacattatctgg
gcgctgctaacactcttcactgtgtccacaggagagggctggccacaggtcctgcaacac
tcagtggatgtgacggaggaggaccggggtccgagccgcagcaaccgcatggagatgtcc
atcttctatgtcgtctactttgtggtcttccccttcttcttcgtcaacatctttgtagcc
ctcatcatcatcaccttccaggagcagggagacaagatgatggaggaatgcagcctggag
aagaacgagcgggcctgcattgacttcgctatcagcgccaagccacttacacgccacatg
ccccagagcagacacaccttccagtaccgagtgtggcactttgtggtgtccccatccttc
gagtacaccatcatggccatgattgcactcaacaccgtcgtgctcatgatgaagtattac
tcggccccctgcacctacgagctggccctcaagtacctgaacatcgccttcacgctggtc
ttctccctggagtgcgtgctcaaggtcatcgcctttggcttcttgaactatttccgtgac
acctggaacatcttcgacttcatcacggtggttggcagcatcacagagatcgtcctcacc
gacagtaagctagtcaacacaagtggcttcaacatgagcttcctgaagctcttccgagcc
gcaaggctcatcaagttgctgcgtcagggctacaccatccgcatcctgctctggaccttt
gtgcagtccttcaaggccttgccctacgtctgcctcctcatcgccatgctcttcttcatc
tatgccatcatcggcatgcaggtttttgggaacatcaaactggacgaggaaagtcacatt
aatcgccataacaacttccggagcttttttgggtccctcatgctgctcttccggagtgcc
acgggtgaggcctggcaggagatcatgctgagctgcctaggagagaagggctgtgagccc
gacaccagtgcgcccgctgggcccccaggccaggagcgctgcggaactgacttggcctac
gtctactttgtgtccttcatcttcttctgctcttttctgatgctaaacctctttgtggct
gtgatcatggacaatttcgagtatctaacccgagactcatccatcctgggcccacaccac
ctggatgaatttgtccgtgtctgggccgagtacgaccgtgctgcctgcggccgcatccat
tacactgagatgtacgagatgttgaccctcatgtcgcctccgctaggcctcggcaagcga
tgcccctccaaggtggcctataagaggctggtgttgatgaacatgccggtggccgaggac
atgacggtgcatttcacctccacgctcatggctctaatccgcacagccctggacattaag
atcgccaaaggtggcgctgacaggcagcagctggactcggagttgcagaaggagacgctg
accatctggcctaatttgtcccagaagatgcttgacctcctggtgcccatgccgaaagca
tctgagctgacagtggggaagatctatgcagccatgatgatcatggattactacaagcag
agcaagatcaagaagcagaggcagcaactggaggagcagaaaaatgcacccatgttccaa
cgcatggagccctcgtcactgcctgaggaaattgtggccaacgcccgtgctctgccctac
ctgcagcaggaccccatggccagcctcggccgtggatacgtgcccacgagtccactctca
gcccgagagcggctccagctggcctgcatggatgatgaggagcaggagcaggagtcactg
gagcccgaggttagtgctgtgggcagctacctccccgtggacacgcagcaccgggcggga
tctgggaaggcggcatctatgccgcgcctgactgtggatccccaggtgctggatcccagt
tccatgcgtcgctccttctccaccatccgggacaagcgctcgggcacctcgtggctggag
gagttttccatggagcgcagcagcgagaacacatatcggtcccgcagacgaagctaccac
tcctccctgcggctcaatgtggatgcgggccacaagtctgagagtctccgtggaggccgg
gagcgcggccgctccaaggaacgcaaacacctgctgtccccagatgtgtcccgctgcaac
tcggaggagcgtggtgctcaggctgacagcgaatcccctgagcaccggccatcccggtcc
cccagtgagggcagggtagggacccccagcaggaagggtgctggttccttcagcgaaagc
tccactccatccgtctctgacaccagcactcccagacgtggccggcggcagcttccccca
gtgccccccaaaccgcggcctctcctcacctacggctcagcccagggtagccaggagggc
tccccgctggcagtgggctgcgcgtcctcctccccgcagcgctacatctcggagccgtac
ctggcggggccagaggacacacaagcctcggactgcggcgaggaggaaacactgaccttc
gaggcggccgtggccactagcttgggccgtgccaacaccatcggctcagccccaccactg
cggcacagctggcagatgcccaacggccactatcggcggaggcggcgcctgtgcggggcg
gctggtgacctcctgagcgacacagaggaggacgacagatgctag
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