Suncus etruscus (white-toothed pygmy shrew): 126013537
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Entry
126013537 CDS
T09902
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr00514
Other types of O-glycan biosynthesis
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
126013537 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
126013537 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
setr01003
]
126013537 (COLGALT2)
Enzymes [BR:
setr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
126013537 (COLGALT2)
Glycosyltransferases [BR:
setr01003
]
O-Glycan biosynthesis
O-linked Gal type
126013537 (COLGALT2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
126013537
NCBI-ProteinID:
XP_049632613
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All DBs
Position
7:53227898..53281114
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AA seq
622 aa
AA seq
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MGASPAGPPAWWPLLVACALLGGGCGALQEAEPDSEDTAGEPVVFPESPLRRPTVLVAVL
ARNAAPALPHFLGCLERLDYPKNRMAIWVATDHNVDNTTEILREWLRGVQRAYHNVEWRP
MAEPRSYPDEIGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDTDNFLTNPQTLNL
LIAENKTIVAPMLESRGLYSNFWCGITPQGFYKRTPDYVPIREWKRTGCFAVPMVHSTFL
IDLRKEASDLLAFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKAHQ
GLQEDLDSLVHMRIEAMIDRPPLEPSQFISDTPKNPNKMGFDEIFMINLRRRKDRRDRML
RTLYEQEIDVKLVEAVDGKALNTTQLKALHIEMLPGYRDPYSSRPLTRGEIGCFLSHHAV
WKEVLERTLATSLVIEDDVRFEHQFRTKLIRLMADVAHAQLDWELIYIGRKRMQVAEPEK
AVPNVPGLVEAGYSYWTLGYVLSLAGARKLVGAEPFGKMLPVDEFLPIMYDKHPVAEYKE
HYQHRDLRAFSAEPLPHLPDHTYTGQPGYLSDTETSTIWDNDTAATDWDRTHPWKGQLRG
ATKNTEALPPAPRATTPTREEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgagccctgcaggacccccggcctggtggccgctgctggtggcctgcgcgctc
ctgggcggcggctgcggggctctccaagaggccgagccggactcggaggacacggccggc
gagccggtggtgttccccgagtcgccgctgaggagacccacggtgctggtggccgtgctg
gcccgcaacgcggcgcccgcgctgccgcactttctgggctgtttggagcgtctggattac
cccaagaacaggatggccatctgggtggccacagaccacaacgtggacaacaccacagag
atccttcgggagtggctgcgaggcgtgcagcgggcttaccacaatgtggaatggcggccc
atggctgagcccaggtcttatcccgacgaaatcgggcctaaacactggcccagctcccgt
ttcgctcacgtcatgaagctacgtcaggccgccctgcgaacggcgagggaaaaatggtca
gactacattctgttcatagacactgacaacttcctcaccaacccacagacgctcaaccta
ctaattgcagaaaacaaaaccattgtggcccccatgttggaatctcgaggtctctactcc
aacttttggtgcgggatcacaccccaggggttttataagcgcacccctgactacgtgccc
atccgagagtggaagcggacaggctgcttcgcggtgcccatggtgcattccaccttcctc
attgacctcagaaaagaggcctcagacctgctggccttctacccaccacaccaggactat
acttggaccttcgatgacatcattgtctttgctttctccagccgccaagcaggcatccag
atgtatctctgcaaccgggaacactacggctacctgcccatcccgctgaaggcccaccag
ggcctgcaggaggacctagatagccttgtccacatgcgcatcgaagccatgattgaccgg
ccaccacttgagccctcacagttcatctcagacaccccaaagaaccccaataagatggga
ttcgatgagatcttcatgatcaacctccggcgcaggaaggaccgccgggaccggatgctg
cggaccttgtacgagcaggaaatcgatgtgaagctggtggaggcggtggatggaaaggcc
ctcaacacgacccaactgaaggcgctgcacatcgagatgctgcctgggtaccgtgacccc
tattcgtcgaggcctctcacgcgaggggagattggctgcttcctcagccatcatgccgtg
tggaaggaggtgctggaacgaacgctggccacgagcctggtcattgaggacgatgtgcgc
ttcgagcaccagttcaggacgaagctcatcaggctgatggcagacgtggcccatgcacag
ctggactgggagctgatctacattggccggaagcgcatgcaggtggcagagcccgagaaa
gcagtacccaacgtgcccggtctggtggaggcgggttactcatactggactcttggctat
gtgctctccctggccggtgcccgcaagctggtgggagctgaaccctttgggaagatgctg
ccagtggacgagtttctgcccatcatgtatgacaagcacccggtagccgagtacaaggag
cattaccagcaccgggaccttcgggccttctcggccgagccactacctcatctacccgac
cacacttacacaggccagcccggctacctcagcgatacggagacgtccaccatctgggac
aacgacactgcagccaccgactgggaccgcacacatccctggaaggggcaactgcgaggt
gccaccaagaacacagaagcgctgcccccggccccgagggccaccaccccaactcgggag
gagctctga
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