Suncus etruscus (white-toothed pygmy shrew): 126013633
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Entry
126013633 CDS
T09902
Symbol
SPTA1
Name
(RefSeq) spectrin alpha chain, erythrocytic 1
KO
K27408
spectrin alpha, erythrocytic
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126013633 (SPTA1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126013633 (SPTA1)
Intermediate filaments
Intermediate filament-binding proteins
126013633 (SPTA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_7
SH3_2
EF-hand_6
DUF7020
SH3_10
Motif
Other DBs
NCBI-GeneID:
126013633
NCBI-ProteinID:
XP_049632705
LinkDB
All DBs
Position
7:62292943..62340157
Genome browser
AA seq
2407 aa
AA seq
DB search
MESGGPKVLETAEEIQERRQEVLGRYQRFKDLVAERGQKLEESYHYQVFRRDADDLEKWI
LEKLKVLEDKSYEDPTNIQGKYQKHEALEAEVQAKSRVLPELEEIRSLRFAEGHFAHEDT
KVHLEELCRLWDFLLELLQKRGAHLLRVLRLQRFLQECADILEWVADKEAIVTSVELGED
WERTELLHKKFEEFQVDLGARKGRVDGVNQYANECAQENHPELPLIREKQAEVNAAWDRL
HDLALQRRKTLSNAADLQRFKRDVKEARQWMQEKEPLLRSEDYGKDLVSAESLFHSHKGL
ERSLAVMDDKVKELCAKADKLSRLHPSEAAHIQQMKEELMAGWQQLRDLATHRHAQLQAS
YWYQRFLSDYEELSGWMREKTALINADELPTDVAGGEALLDRHQQHKHELDSYNDRFQSA
EETAQALLDTGHEASEKVQEKMFDLASNWAALLELWEKRQQQYRQCLDLHLFYRDSEQVD
SWMSRQEAFLDNEELGNSVGTVEALCLKHADFEKAFSAQEAKIMTMDETANKLIDNGHYD
AEKIADIRDRLLARRDTLRNRAATRREKLEASLLLQKFYQDSDDLKNWINKKKKLADEED
YKETQNLKSRVQKQQVFEEELADNEKLLHSLEQTGQEMIETGHYASPQVAARVEEVQGLW
KELLEATAQRGTQLYDANQQLQFENNEEDLLRWLEEVEWQAASDDYGKGLADVQNLLRKH
GLLETALGNRQGQMNTLTDLAAYFEETGHPDAGDIRARQQSLASRFEALKEPLAARKKRL
TDLLRLQQICRDTEDEEAWIQETEPSAASTQLGKDLIASKNLLNRHQVIQDDIESHRPRI
QAITDRGTRMVEEGHFAADDVVSRVQSLNENMESLQARAARRQKDLEGNVQFQQYLADLH
EAEAWIREKEPIVNNTNYGADEEAAGALLKKHEAFLIDLTAFGNSIQALREQANACQKQQ
ATPVEGAAREERVVALYDFQARSPREVTMKKDDVLILLSSINKDWWKVEADDHQGFVPAV
YVRKLAHDELPSLPQRRREEVGSITQRQEQIEDQYHSLLDQAEDRRRHLLQRYKEFLLAY
EAGDMLDWIREKRAEHSGVELDDVWELQKKFDEFQMDLKTNEPRLRDINQVADDLLYEKL
LTPQGAQIQQELNSRWGSLQRLAEEQRQLLGSAHAVEMFHREADDTKEQIEKKCQALSAA
DPGSDLLSVQALQRQHEGFERDLLPLGEKVTVLGETAERLIESHPDAIEDLQRQRVELNE
AWSDLLGLTEDRKESLSEAQKFYLFLSKARDLENWISGIGGLVSSQELADDLTGTEILIE
RHQDHHADMEAEGPSFQALEDFGAKLIDDGHRASPDIEDKLQAVRTGRDGLEEAWEKRKR
MLDQCLELQLFQGKCDQAESWMVARENALRADDKDSLDSLEALMKKRDDLDKAMAAQEEK
MVELQNTAEWLISNDHYAQDVIAARLQRLLDRWRALKVQLAAERTKLGDYADLKQFYRDL
EELKEWISEKLPTACDESYKDPTNIQRKYLKHQTFENEVHGRAEQVEGLLNLGNSLIERR
ACDGQEDTVKGQLEELEKEWDYLLERTIDKGQKLNEASRQQRFNTGVRDFEFWLSEAETL
LAMKDQARDLASAGNLLKKHQLLETEMLARQDALKDLNELAAELLSSGTFNTEQIVEKRD
TVNQRLLNVQDLASAHHEKLKEAHALFQFFQDLDDEEAWIEEKLVRMSSQDFGRDLQGVQ
NLLKKHRRLEGELVAHEPAIQNVLDMAEKLGDKAAMGREQIHERLAQFVRHWEDLQELAK
VRGQRLAESLEFLQFMETAEEEEAWLSEKEATVGRGDSGDTLAATKSLLKKHEALENDFA
VHETRVQSVCTQGEDILRKDNQNQDKISTKIQALKAKAPALSQALRAWKMQLDDDYAFQH
FNWKADVVEAWIAEKEASLKMEGNGTDLTTFLNLLAKQDTLDASIQSFQQERLSEITDLK
NGLVSAQHNQAKAIEERHAALLQSWEKLVAASAVHRQKLLDRQLPLQKAEELFMEFAHKA
SAFNNWCENAEEDLSEPVHCISLNEIRKLQKDHEAFLASLAGAQADFNHLLELDQQIKAL
GVSSSPYTWLTVEVLEKMWKHLPDIIKEREQELQKEEARQVKNFEMCQEFEQNASAFLQW
VLETRAYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRQLTKIEDLGDSLEEALVLDLK
YSTIGLAQQWDQLHQLGVRMQHNLEQQIQAKDTIGVSEETLKEFSTTYKHFDENLTGHLT
HKDFRSCLRGLNYYLPMVEEGEPEPKFEKFLDAVDPGRKGYISLEDYTAFLIDKESENIK
SSDEIESGFQALAEGKSYITKEDMKQALTPEQVAFCASHMQQYVDPRGRGHAAGYDYVGF
TNSYFGN
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgggggccccaaggtgctggagacagcagaggagatccaggagcggcgccag
gaggtgctgggccggtatcagagattcaaggacctagtggctgagcgaggccagaagctg
gaagagtcctaccactaccaggttttcaggagagatgccgatgacctggagaagtggatc
ctggagaagctaaaagtcttggaagataagagttatgaagatcccaccaacattcaggga
aaataccagaagcatgaagccttggaggctgaagtgcaggccaagtcgagggtcctgcct
gagcttgaggagatccggtcactccgctttgctgaggggcactttgctcatgaggatacc
aaggtgcacttggaggaactgtgccgcctgtgggacttcctgctggagctgttgcagaag
aggggggcccatctgcttcgggttctgcggctccagcgcttcctgcaagaatgtgctgat
atcctggaatgggtggcagacaaggaggccatcgtgacatcggtggaacttggggaggac
tgggagcgcacagagcttctacacaagaagtttgaggagttccaagtggacctgggagca
cgcaagggtcgagtagatggggtgaaccagtatgccaatgagtgtgctcaggagaaccac
ccagagctgccgctaatcagggagaagcaggctgaggtgaatgctgcctgggaccgtctc
cacgacctggcgcttcagcggcggaagaccctgtccaatgcggcagacctccagcgattc
aaaagggacgtgaaggaggccagacagtggatgcaggagaaggagccactactcaggtct
gaggactatggcaaggatctggtgagcgccgaatcactgttccacagtcacaagggtctg
gagcgcagcctggcagtcatggacgacaaggtgaaagagctgtgtgccaaagctgacaag
ctgtcacgcttgcacccctcggaggctgcccacatccagcagatgaaggaggagctgatg
gctggctggcaacaactgcgggacctggccacacacagacatgctcagctgcaggcatcc
tactggtaccagcggttcctgtcagactatgaggagctttcaggctggatgagggagaag
acagctctgatcaacgctgatgagctgcccactgatgtggctggtggggaagccctgttg
gacaggcaccagcagcacaagcatgagctggactcttacaatgaccgatttcaatctgcg
gaagagactgcccaggccctgctggacactggtcatgaagcatctgagaaagttcaggag
aagatgtttgatcttgccagcaattgggcagctctgttggagctgtgggagaaacggcag
cagcaataccggcagtgcctggacctgcatctcttctaccgtgacagtgagcaagtagac
agctggatgagcaggcaggaggccttcctggacaacgaagagctgggcaactcagtaggc
accgtggaggctctctgcttgaagcacgcagactttgagaaggctttctctgcacaggag
gcaaagatcatgaccatggatgagacagcaaacaagctgatagataatggccactatgat
gcagagaaaatcgctgacatccgggaccggctgctagctcggcgagacaccttgcggaat
agagcggccacccgacgtgaaaagctggaagcttcgctactcctgcagaaattctatcag
gactcagatgacttgaagaattggatcaacaagaaaaaaaagctggcagatgaggaagac
tacaaggaaacacagaacttaaagagccgtgtccagaagcaacaggtgtttgaggaggag
ctggcagacaatgagaagcttctccacagcttagagcagacaggccaggagatgatcgag
acaggccactatgcctctccccaggtggctgcacgtgtggaggaggtccaggggctctgg
aaagagctgttagaggccacagcacagagagggacccagctgtatgatgccaaccagcag
ctgcaatttgagaacaatgaggaggatcttctgcgctggctagaggaggtggaatggcag
gcggcttccgacgactatgggaaaggcttggctgatgtgcagaacctgctgaggaaacat
ggcctactagaaacggccctaggaaaccgccagggccagatgaacaccctcacagacctg
gcggcatactttgaggaaacaggccaccctgatgccggggacatccgggcacggcagcag
tccctggcatctcggttcgaggctctgaaggagccactggctgcccgcaagaagcgactc
acagatctgctgcgtttgcagcagatctgcagagacacggaagacgaagaggcctggatc
caggagactgagccctcagctgcctccacccaactgggcaaggatctgatcgcctccaag
aatcttctcaacaggcaccaggtcatccaggatgacattgagagccacaggccacgcatc
caggctatcacagaccgggggaccaggatggtagaggaaggacactttgcagcagatgat
gtggtgtcccgggttcagagtttgaatgagaatatggagtctcttcaggcccgggcagca
cggcgtcagaaagatctggagggcaacgtccagttccagcagtacctggctgacctgcat
gaggctgaggcatggattcgagagaaggaacctattgtgaacaacaccaactatggagca
gacgaggaggctgctggggctcttctgaagaagcacgaggccttcctgatagacctcact
gcctttgggaatagcattcaggctcttcgggagcaggccaatgcctgccagaagcagcag
gctacgccagtggaaggtgccgcccgtgaggagagggttgtggctctgtacgactttcag
gcccgcagcccccgagaggtgaccatgaagaaggatgacgtcctaattctgctcagctcc
atcaacaaggactggtggaaggtagaggccgatgaccaccaaggctttgtgcccgccgtg
tatgtcagaaagttggcccatgatgagctcccctcactcccacagcggcgacgggaagag
gtcgggagcatcactcagcgccaggagcagatcgaggaccagtaccactccctcctggac
caagcagaggaccgccggcgccatctgctgcaacggtacaaggagtttctgctggcctat
gaggctggggacatgttggactggatccgagagaaaagggctgaacacagcggggtggaa
ctggatgatgtctgggagttgcagaagaagtttgatgaattccagatggatctgaaaaca
aatgagcctcgactgagggacatcaaccaagtggcagatgatcttctgtatgaaaaactt
ctaacaccacaaggagctcaaatccagcaggagctgaattcccgctggggctccctgcag
aggctcgctgaggagcagcgccaactgctgggtagtgcccatgctgtcgagatgttccac
agagaagcagatgacacaaaggagcagatagagaagaagtgtcaggccctgagtgcagct
gaccctggctcagatctgctaagtgtgcaagcccttcagcggcaacatgaaggcttcgag
agggacctgcttcctttaggggagaaggtgactgtactaggggagacagcagagcggctc
attgagtcccatccagatgccattgaggacttgcagagacagcgggtagaactgaatgaa
gcctggagtgacttgttgggactcacagaggatcgaaaggagagcctgagtgaggcccag
aagttctacctgttcctcagcaaggccagggacctggagaactggattagtggcatcggg
ggcctggtgtcctcacaggagctggctgatgatctcacgggcactgagattctgatagag
aggcaccaggaccatcacgctgacatggaggccgagggcccttccttccaggccttggaa
gactttggtgcaaaacttatagatgatgggcaccgggccagccctgacattgaggacaag
cttcaggctgtccgcactgggagagatggtttggaggaagcttgggaaaaacgcaagaga
atgctggatcagtgtctggagttgcagttgttccaagggaaatgtgaccaggctgagagc
tggatggtggccagggagaatgccctgagggctgatgacaaggactcactggacagcctg
gaggctctgatgaagaaacgtgatgatttagacaaggccatggctgcccaggaggagaag
atggtggagctccagaacactgctgagtggctcatctccaatgaccactatgctcaggat
gtgattgctgcccgcttgcagcggctcctggacaggtggagggctctcaaggtacagttg
gctgctgaacgaaccaaattgggggactatgcagatctgaaacagttttaccgggatctt
gaagagttgaaagagtggatcagtgagaagctgcccacagcctgtgatgagtcctacaaa
gaccccaccaacatccagagaaagtacctgaagcaccagacctttgagaatgaggtccat
ggccgggctgagcaggtggaaggactcctaaacttgggaaactcactgattgagcggagg
gcatgtgatggccaggaggatactgtgaaggggcagttggaggaattggagaaagaatgg
gactaccttctggaaagaaccattgacaaagggcaaaaactcaacgaggccagcaggcag
cagagattcaacacgggtgttcgggattttgaattctggctgtcagaggcagaaaccctg
ctggctatgaaggaccaggccagggacttggcttcagcaggaaacctgctcaagaagcat
cagctcctagagacagagatgttggccagacaggatgcactcaaggacctaaatgagctg
gctgctgagctgctttccagtgggaccttcaatactgagcagattgtggagaagagggac
acagtaaatcagcgtctcctgaatgtacaagacctggcctctgctcaccatgagaagctg
aaggaggcccatgctctattccagttctttcaggatctggatgatgaggaggcctggata
gaagagaagcttgtgcgtatgagctcccaggactttggacgagatcttcagggtgtccag
aacttactcaagaaacaccggcgcctggaaggagagttggtggcccacgagcctgccatc
cagaatgtgttggacatggctgaaaagttgggggacaaggctgccatgggccgagaacag
atccacgagcgactggctcagttcgtgcgtcactgggaggatcttcaagagctggcgaag
gttcgtggtcagcgactggctgagtccttggagttccttcagttcatggagactgcagag
gaggaggaggcctggctcagcgagaaggaggccacggtgggccgtggtgattccggggac
acattggctgctacaaagagtttactgaagaagcacgaagccttggagaatgacttcgct
gtccatgagacccgtgtacagagtgtctgcacccaaggagaggacatcctgaggaaggac
aatcagaatcaggacaagatttctactaagatacaggctctgaaggccaaggctcctgct
ctgtcccaggctctaagggcctggaaaatgcaactagatgacgactatgcctttcagcac
ttcaactggaaggcagatgtagtagaggcctggattgctgagaaggaggccagtctgaag
atggagggcaacggcacagatctgactaccttcctcaacctcctggcaaagcaggacaca
ctggatgccagcatacagagctttcagcaggagaggctgtctgagataacagacctaaag
aatggactggtgtctgctcagcacaatcaggccaaagccattgaggagcgccatgctgct
cttctgcagagctgggaaaaactggtggcagcctcagctgtccacagacagaagctgctg
gacaggcaattgcccttgcagaaggctgaggaactcttcatggaatttgcacacaaggcc
tcggctttcaacaactggtgtgagaatgcggaggaggaccttagtgagcctgtgcactgt
atctccctaaatgagatccggaagctgcagaaggaccatgaggctttcctggcctccctg
gcaggggcccaggctgacttcaaccacctactggagctagatcagcagattaaggccctg
ggggtgtcttctagtccttatacctggttaaccgtggaggtgctggagaagatgtggaaa
cacctccccgacatcatcaaggaacgggagcaggagttgcaaaaggaagaggccagacag
gtgaaaaacttcgagatgtgccaggagtttgaacagaatgctagtgcattccttcagtgg
gtcctggagaccagggcctatttcctggacgggtctttgctcaaagaaacaggaactctg
gaatctcaattggaagccaataaaaggaagcagaaagagatccaggcaatgaagcgtcag
ctgacaaagatcgaggacttgggggacagcctagaagaggctttggtactggacctcaag
tacagcaccattggcctggcccagcagtgggaccagttacatcagctgggggtgcggatg
cagcacaaccttgaacagcagatccaggccaaggacaccattggtgtgagtgaggagacc
ctgaaggaattcagcacaacctacaaacactttgatgaaaacctgactgggcacctgact
cacaaagatttccgctcctgcctgagaggcctcaactactatctgcccatggtggaagag
ggtgagcctgagcccaagtttgagaagttcctggatgccgtggatcctgggaggaaaggc
tacatctcattggaggactatacggccttcctgattgacaaggagtcagaaaacatcaag
tccagtgatgagattgagagtgggttccaagccctagcagagggcaaatcatatatcacc
aaggaggacatgaagcaggctctgaccccggagcaggtggccttctgtgcttcacacatg
cagcagtatgtggaccctcggggccgaggccacgcagctggctacgactatgtgggcttc
accaattcctactttgggaattga
DBGET
integrated database retrieval system
