Suncus etruscus (white-toothed pygmy shrew): 126013635
Help
Entry
126013635 CDS
T09902
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126013635 (RAI1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
126013635 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Peptidase_S64
Motif
Other DBs
NCBI-GeneID:
126013635
NCBI-ProteinID:
XP_049632711
LinkDB
All DBs
Position
7:97039565..97133358
Genome browser
AA seq
1904 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQAYPGYE
GGAGAPTGSARSKGLASQQGLQGRPAFPSYSVQDSNPYPGRYSGEESMQAWGAPQPPPPQ
PQPLPGGVGKYDENLMKKTAVPPGRQYPEQGAQLPFRSHSLHVQPQLSQPQQSLPYPKLQ
RQKLQNDMASPLPFPPGSHFPQHSQSFPTSSTYSSTGQGGGQGTHSYKSCTAPSAQPHDR
PLTANASLTPGQRVQNLHTYQSSRLSFDQQKQQQQQQQQQQQQQQQQQQQQQQQQQALQS
RHHAQETLHYQNLAKYQHYGQQGPGYCQPDAAVRTPDQYYQTFSPSSSHSPARSVGRSPS
YSSTPSPLMPNLENFPYNQQSLSTGTFPATGLTDHSHFMPLLNPSPTDATSSVDTQAGNC
KPLQKDKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAGPQKKGVKNLVSRTPE
QHKSQHCSPEGSGYSAEPAGTPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCSQ
ARGSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHGSLPLDSFSKFVAGERDC
PRLLLSALAQEDLASEILGLQEAIGEKADKAWAEAPSLAKDTNKPPFSLENHSTCLDPVA
KTVWSRPGEPEALPESLQLDKGGTAKDFSPGLFEDPSVSFATPDPKKTGPLAFGTKPPLG
AAAPDPATAAFDCFPDTAAAGAADSANPFAWPEENLGDACPRWGLHPGELAKGLETGRQT
TDVVVGKESACEASACLGFREEEPPGEKAPGSRDFKQEEVGGVKEEAGGLLQCPEVGKAD
RWLEDSRHCCTSDFGDLPLLPPTGRKEDLEAEEEYSSLCELLGSPEQRPNMQDPLSPKAP
LMCTKEEVGEVLDSKTGWGSPCHLSGDSVILLGPTVGAESKVQSWFEASLSHMKPGEEGS
EGALAPGDPVALTPDTSLAPKAAVPEASIAKKEPVPRGKSLRSRRVQRGLPEAEDSPCRA
PALPKDLLLPESCTGTPQGQLEGTGALSRGISEGFPRMCTRSFTALSEPRTPGPPGLITT
PAPPDKLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTP
GQDQRSMILRSRTKTQEVFHAKRRRPSEGRLPTCRTAKKLLANSHLPTTFKVSGSPQKEG
RVGPRARVPKPGAAGKLSDRPLHALKRKSAFMAPVPTKKRNLVLRSSGVGDEDGKEGVAE
GAPPLFKRLSSPKKAKPAKGSGEPTAKPPPPETTDTCLKLVSRAAFPGAMKTKVLPPRKG
RGLKLEAIVQKITSPSLKKFACKAPGAPPGNPLSPTLLEKERGIKSAGGSPVGAEEGLLG
VGTMQKVPAASGIDPMCRNPANRSLKGKLMNSKKLSSTDCFKTEAFTSAETLAPGAMALV
PKKRSRKGRAGALALPKGPLEKRPHLGPPLPLTSRDRMGVGTHGGSEDVSGGGGKKPKTE
ELGLASQAPEGRPCQPQTRAQKQPGHANYSSYSKRKRLSRGRAKNAASSPCKGRAKRRRQ
QQVLPLDPAEPEIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTVCTVVNSPGDEPK
PHRKPSSSTSSSSSSSSSLDAAGASLATLPGGSVLQPRPSLPLSSTMHLGPVVSKTLSTS
CLVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEESLPLLERTLKGL
ECPAAVAGKPPRPDGPADPAKQGALRTSARGLSRRLQSCYCCDGQGDGGEEAAAADKSRK
HECSKEGAAAESGGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCASCQEA
GATIGCCHKGCIHTYHYPCANDAGCIFIEENFSLKCPKHKRQPL
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatctcgcctggagaattacaggcagccaagccaagccgggctgagctgt
gaccggcagcggctgctggccaaggactattataacccgcaggcgtacccaggctacgag
ggcggggctggtgcgcccactggctctgctcgcagcaaaggcctggcctcgcagcagggc
ctgcagggtaggccggccttccccagctacagcgtccaggacagcaacccctacccaggc
cgttactcgggtgaggagagcatgcaggcctggggggccccccagcccccacctccccag
ccacagcccctgccagggggggtgggcaaatacgatgagaacttgatgaagaagacagca
gtaccccctggcaggcagtacccagagcagggtgcccagctgcccttccggagtcactcc
ctgcacgtccagccacagctgtcgcagcctcagcagtccctgccctaccccaagctccaa
aggcagaagctacagaatgacatggcctcgccactgccctttcccccgggcagccacttt
ccccagcactcacagtccttccctacctcttccacctactcctccactggccagggtggt
gggcaggggacccactcctataagagttgcacagcaccctctgcccagcctcatgacagg
ccgctgaccgccaatgctagcctgacaccaggccagagggtccagaaccttcacacctat
cagtccagccgcctcagctttgaccagcagaagcagcagcagcagcaacaacaacagcag
caacaacagcagcagcagcagcagcaacagcagcagcagcaacaacaagcccttcagagc
cggcatcatgcccaggaaaccctccattaccaaaaccttgccaagtaccaacattatggg
caacaagggccaggctactgccagccagatgcggccgtcaggactccggaccagtattac
cagactttcagccccagctccagccactctcccgcgcgctctgtgggccgatcaccctcc
tacagctccaccccatcaccactgatgcccaatttggagaacttcccctacaaccagcag
tcactcagcacgggcaccttccctgccaccggcctcaccgaccacagccactttatgccc
ctactcaacccctccccgacagatgccaccagctccgtggacacccaggctggcaactgc
aagcccctccagaaagacaagctccccgagaacttgctgtcagacctcagcctgcagagc
ctcacggccctgacctcacaggtggagaacatctccaacacggtccagcaactcctgctc
tctaaggctgccggaccgcagaagaagggcgtcaagaacctggtgtccaggaccccggag
cagcacaagagccagcattgcagtcctgaaggaagtggctactcggccgagccggccggc
acgccactgtcagagccgttgagcagcacgccccagtccacgcacgctgagccgccggag
gctgactacctaagcggctccgaggaccctctggagcgcagcttcctctactgcagtcaa
gcccgggggagccccgccagggtcaacagcaactcgaaggccaagccagagtccgtgtcc
acatgctccgtgacctctcccgacgacatgtccaccaagtctgacgactccttccagagc
ctgcatggcagcctgcctctcgacagcttctccaagtttgtggccggggagcgggactgc
ccgcggctgctgctcagtgccctggcccaggaggacctggcctcagagatcctggggcta
caggaggccataggggagaaggctgacaaggcctgggccgaagcgcccagcttggccaag
gacaccaacaagccacctttctccctggagaatcacagcacctgcctggaccccgtggcc
aagaccgtgtggtcgcgcccaggggagccggaggccttgcctgagtccctacagctggac
aaaggtggcactgccaaggacttcagcccgggactctttgaagacccatcagtcagcttt
gccacccctgaccccaagaaaacgggtcccctcgccttcggcactaagcctccacttggg
gccgctgccccagaccctgccacagcggctttcgactgcttcccagacacagctgccgcc
ggagcagcagacagtgccaacccctttgcctggcccgaggagaacctgggcgatgcctgt
ccccgctgggggctgcaccctggcgagctcgccaagggcctcgagacaggcaggcagacc
acagatgtcgtggtgggcaaggagagcgcctgtgaggcctcggcctgcctgggcttccgg
gaggaggagcccccaggagagaaggccccagggtcccgggacttcaagcaggaggaggtg
ggtggggtgaaggaggaggcaggcgggctgctgcagtgccccgaggtgggcaaagcggac
cggtggctggaggacagccgccactgctgcacctctgacttcggggacctgccactgctg
ccgcccacgggccgcaaggaggacctagaggcggaggaggagtactcctccctgtgcgag
cttctaggcagccccgagcagaggcccaacatgcaggacccactgtcgcccaaggccccc
ctgatgtgcaccaaggaggaggtcggggaggtgctggactccaagacaggctgggggtcc
ccatgccacctctctggggattctgtcatcttgctgggccccactgtgggcgctgagtcg
aaggtacagagctggttcgaggcgtccctgtcccacatgaagcccggggaagaagggtcc
gagggtgcattggctccaggggatcctgtcgccctgacccctgacacctctctagcccca
aaggccgccgtgccagaggcatccattgcgaagaaggagcctgtgcctcggggcaaaagc
ctacggagccgccgggtacagcggggtctacctgaggctgaggactccccatgccgagcc
ccggcattgcccaaagatctcctgctccccgagtcctgtacaggcaccccccagggacaa
ctggagggcacaggggcactgagccggggcatctccgaagggttccccaggatgtgcacc
cgctccttcaccgccctgagtgagccccgcacacctggtcccccaggcctgattaccact
cctgcccccccagacaaactgggaggcaagcagagagccgccttcaagtcaggcaagcgg
gtggggaagccctccccaaaggcagcctccagccccagtaacccagccgccctgcctgtg
gcctctgacagcagccccatgggctccaagaccaaggagactgactcgcccggcacgcct
gggcaagaccagcgctccatgatcctccggtcccgcacaaagacccaggaagtcttccac
gccaagcggcggaggccctcggagggccgcctccctacctgccgcacggctaagaagctc
ctggccaacagccatctgcccaccaccttcaaagtctctgggagcccccagaaggagggc
agggtgggaccccgggcacgggtccctaagccgggggccgctggcaagctctctgatcgg
ccccttcatgccctcaagcgcaagtctgccttcatggcgcctgtccccaccaagaagagg
aacctggtcctgcggagcagcggtgtgggagacgaggatgggaaggagggtgtggctgag
ggtgcccctcccctcttcaagaggctgtcgtcccccaagaaggccaagcctgcaaagggc
agtggggagcccacagcaaagcccccaccgccagagaccaccgacacctgcctcaagctg
gtgtctcgagccgccttcccgggagccatgaagaccaaggtgctgcccccccggaaaggt
cggggcctgaagctggaggccatcgtgcagaagattacatcccccagcctgaagaagttc
gcctgtaaagccccgggagctcctcccgggaaccctctgagcccgaccctcctggagaag
gaacgagggatcaagagtgctgggggaagcccggtgggggcagaagaaggtctcttaggt
gtgggcactatgcagaaggtcccagcagcctcaggaattgacccgatgtgcagaaatcca
gccaacagatccttaaaaggtaaactcatgaacagtaagaaactgtcctccactgactgt
ttcaaaaccgaggccttcacatctgcagagacactggcgcccggagccatggcactagtg
cccaagaaaagaagccggaaaggcagggctggggccttggcactccccaaaggccccctg
gagaagcggccccatctcggcccccctctgcctctgacttcccgagaccggatgggagtg
ggcacacatgggggcagtgaggatgtctctggtggaggtggcaagaagccaaagacagag
gagctgggcctggcctcccaggcccctgaaggccggccctgccagccccagaccagggca
cagaaacagccgggtcatgccaactatagcagctattccaagcggaagcgcctctcccgg
ggcagggccaaaaatgctgcctcttccccctgtaaagggcgggctaagcggcggcggcag
cagcaggtgctgcccctggatcctgcagagcctgaaatccgcctcaagtacatttcctca
tgcaagcggcttcgggcagacagccgcacccccgccttttcacccttcgtgagggtggag
aagcgtgacgcattcaccactgtatgcactgttgtcaactcccctggggatgagcccaag
cctcataggaagccttcatcttccacctcctcttcctcatcctcatcctcctctttggat
gcagccggggcctccctggccacgctcccaggaggctctgtcctgcagccacggccctcc
ctgcccctctcctccaccatgcacctggggcctgttgtttccaagaccctgagtacctct
tgccttgtttgctgcctctgccaaaacccagccaactttaaggacctgggggacctctgt
gggccctactaccctgaacactgcctccccaaaaagaagccaaaactcaaggagaaggtg
cggccagagggcacctgtgaggagtccttgccgctcctagaacgaacactcaaaggcctg
gagtgcccagctgccgttgccgggaagccccctcggccagatggcccggccgaccctgcc
aagcagggtgctctgcgcaccagtgcccggggcctgtcgcggcggctgcagagttgctac
tgctgtgatggtcagggggatggtggcgaggaggcagccgcagctgacaagagccgcaag
catgagtgcagcaaggagggagcggcggcggagtctggtggggacacccaggagcactgg
gtgcatgaggcctgcgccgtgtggacgggcggggtctacctggtggccgggaagctcttt
gggctgcaggaggccatgaaggtggccgtggacatgacgtgtgccagctgccaggaagct
ggggccaccatcgggtgctgccacaagggatgcatccatacctaccactacccgtgtgcc
aacgatgcgggttgcatattcatcgaagagaacttttctttgaagtgtcccaaacataag
aggcagccgctgtaa
DBGET
integrated database retrieval system
