Suncus etruscus (white-toothed pygmy shrew): 126013643
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Entry
126013643 CDS
T09902
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04517
IgSF CAM signaling
setr04721
Synaptic vesicle cycle
setr04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126013643 (RIMS1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
126013643 (RIMS1)
04721 Synaptic vesicle cycle
126013643 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126013643 (RIMS1)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
126013643 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
126013643 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
FYVE_2
Motif
Other DBs
NCBI-GeneID:
126013643
NCBI-ProteinID:
XP_049632727
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All DBs
Position
7:complement(68056642..68633651)
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AA seq
1393 aa
AA seq
DB search
MWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSRS
QTPLSTAAASSQDTAFRSTQPDSSKGPEPSQPAVGLDQKQAASRSRSEPPRERKKTPGLS
EANGKGAPKSEKKRVARGAAAPGRGEGAPEEWARRERREGRRLEKGRSQEHPDGSRKREE
GATEKPRQGEEYQSRYRSDPNLARYPVPAAPEEQQMRMHARVSRARHERRHSDVALPRTE
AAAAAVQPDGQAGQRTPPPERTAEVRAPLGAKPATSRSPPAPRHGLPVPAEAPEPVRKQS
RLEPSAAGPVRKAKREKVSETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKKRQMSVSSS
EEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEG
DRLIGRVILNKRATMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAG
DEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSS
FESQKMERPSISVISPTSPGALRDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPSRV
DGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVW
DQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGES
SSKKLQRSQRISDSDISDYEVDDGIGVVPPGSRSSARESKSTTLTVPEQQRTTHHRSRSV
SPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSSVDHRSRDVDSQYLS
EQDSELLMLPRAKRGRSAECLHTTSELQPSLDRARSASTNCLRPDTSLHSPERERGRWSP
SLDRRRPPSPRIQIQHASPENDRHSRKSERASIQKKTRKGTASDAERMHRQGSPTQSPPT
DTSFSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRFKQSTGSGSSQELDREQY
SKYNSHKDQYRSCDNVSARSSDSDLSDVSAISRTSSASRLSSTSFMSEQSERPRGRISSF
TPKMHGRRMGTSGRAIVKSTSVSGEIYTLEHNDGSQSDTAVGTVGLGGKKRRSSLSAKVV
AIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSS
EGNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIR
ARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVL
QVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLAPLTRRASQS
SLESSTGPPCIRS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatgcaatttatgtcgaaagcaacaagaaatcttaactaaatctggggcgtgg
ttctttggaagtggtcctcagcagccaagtcaggatggaactctaagtgatacagctaca
ggtgctggttctgaggttcccagagaaaagaaagcacggctccaagaacgatcgaggtct
cagacacccctgagcacggcagctgcctcctcacaggacactgcttttcgcagcacacag
ccagacagcagtaaagggcctgaaccctcacagccagcggtggggcttgaccagaagcag
gctgcctccaggtctagaagtgaacctcccagagagaggaagaaaacgccggggctttcg
gaagccaatggcaaaggcgccccgaagagcgagaagaagcgcgtggccaggggcgcagcg
gctccggggaggggcgagggggccccggaggagtgggcgcgccgagaaaggcgggaaggc
cggcggctggagaaagggcggtcgcaggagcaccccgacgggtctcggaagcgcgaagaa
ggcgcgaccgagaagccgaggcaaggggaagagtaccagagcaggtaccgcagcgacccc
aacctggcgcggtacccggtgccagcggcgcccgaggagcagcagatgcgcatgcacgcc
cgggtgtcccgcgcgcgccacgagcggcgacacagcgatgtggcgctcccgcgcaccgag
gcggcggcggcggccgtgcaacccgacggccaggccggccagcgcacgccgccgcccgag
cggacggcagaggtcagggcgccgctgggagccaagcccgcgacgagccgcagtccgccc
gcgcccaggcatgggctgccggtccccgccgaagcccccgagcccgtccgcaaacagagc
cgcctggagcccagcgcggcggggcccgtgcgcaaggccaagcgcgagaaagtgtcggag
accatgctgcgcaacgactcgctgagctccgaccagtccgagtcagtgcggccctcgccg
cccaagccgcaccgcgccaagaggggcggcaagaagcggcagatgtcggtgagcagctcg
gaggaggagggcgtctccacgcccgagtacacgagctgcgaggacgtggagctggagagc
gagagcgtgagcgagaaaggtgacttggattattactggttggatcctgccacgtggcat
agccgggaaacctcccctattagttcgcatcctgtaacgtggcaaccatcgaaagagggg
gaccgattaattggacgtgttattcttaataaaagagcaaccatgcccaaagaatcaggt
gcattacttggtttgaaagttgttggaggaaaaatgaccgacttaggacgccttggggcc
ttcatcaccaaagtaaagaagggaagccttgcagatgtagttggacatttaagagcaggg
gatgaagttctagaatggaatggtaaacccctgccgggagctacaaatgaagaagtttac
aacattattttagaatcaaaatcagaacctcaagttgaaattattgtttcaaggcctatt
ggtgacattccacggattcctgaaagctctcaccctccactggagtctagttctagttct
tttgaatctcagaagatggaaaggccttctatttctgttatttctccaacaagtcctgga
gctctaagagatgccccacaagtcttaccagggcaactttctgtgaagctatggtatgat
aaagtgggacatcagctgatcgtcaatgttctgcaagcaacagaccttccttctagagta
gatgggcgtcccaggaacccttatgtaaaaatgtattttcttccagatagaagtgataaa
agtaaaaggaggactaaaacagtaaagaaaatactagaaccgaaatggaatcaaactttt
gtctattcacatgtacatcgtagagattttagagaacgaatgttagaaataactgtgtgg
gatcaaccaagagtacaagaagaagagagtgaatttcttggagagatcctcatagaacta
gagacagcacttttagatgatgaaccccactggtataaacttcaaacacatgatgaatct
tcactacctcttcctcagccatcacctttcatgccaaggcgacatgttcatggagaaagt
tctagcaaaaaacttcaaagatctcagcgaatcagtgatagtgacatctcagattatgag
gttgatgatggtattggagtagttcctccaggttctagatctagtgctagagaaagtaaa
tctacaacattaactgtgccagaacagcaaagaacaactcatcaccgctcacgttcagta
tctcctcatcgcggcgatgatcagggaagaccacgttcacgtttaccaaatgtgccatta
cagaggagtttagatgaaattcatccaacaagaaggtcacgatctccaactagacaccat
gatgcctcccgaagttcagttgatcatagatccagagatgtggacagtcagtatttatca
gaacaagacagtgagcttcttatgctgcccagagcaaaacgaggacgaagtgcagaatgc
ctacatactaccagtgaactgcagccctcccttgacagggctaggagtgctagtaccaac
tgcttgagaccagatactagtttgcattcaccagaacgagaaaggggtagatggtccccc
tccctagataggagacggcctcctagccccaggattcaaatccagcatgcatctccggag
aatgacaggcactccagaaagtctgaaagagctagcatccaaaaaaagactaggaagggc
actgcctctgatgcagaaaggatgcaccgtcaaggaagtccaactcaatctcctcccaca
gacacatctttcagcagtcgaaggggaagacagctaccacaagtgccagtgagaagcgga
agtatagaacaagcaagcttagtagtggaggagagaacaagacagatgaaaatgaaagtg
catcgatttaagcagtcaacagggtctggttctagtcaagaacttgatcgcgagcaatat
tccaagtataatagccacaaagatcagtatagaagctgcgataacgtctctgccagatca
tcagatagtgacctgagtgatgtgtccgccatttcccgaaccagcagtgcctcacgtctc
agcagcacaagctttatgtcagagcaatctgagcgccccaggggtagaatcagttcattt
acccccaaaatgcatggcagacggatggggacgtctggaagagccatcgtgaaaagcacc
agtgtgagtggagagatctacacactggaacacaatgatgggagtcagtcagacacagct
gtgggtacagttggattaggtggaaagaaaaggagatccagtctgagcgccaaagtggtt
gccattgtgtctcggagaagcagaagcacatcccaactaagccaaacagagtcgggccac
aagaagttaaaaagtactatacagagaagcacagaaacaggaatggcagcagaaatgagg
aagatggtcaggcagccaagtcgagagtctacagatggcagcatcaacagttacagttct
gagggcaacttaatattccctggagttcgactaggagcagacagtcagtttagtgatttt
ctggatggactgggaccagcccaacttgttggacgtcaaaccctcgccacacctgcaatg
ggtgacatacagattggaatggaggataaaaagggccagttagaagtggaagttattaga
gcacgaagcctcacacaaaagcctggttccaaatctacacctgctccatatgtcaaagtg
taccttttggaaaatggggcctgtatagccaagaagaagacaagaattgcacgaaaaacc
cttgatcctttgtaccaacagtccttggtttttgatgaaagcccacagggtaaagttctt
caggtgattgtctggggcgactatggcagaatggaccataaatgctttatgggtgtggct
cagatcttgctggaagaacttgatttgtccagtatggtaattggatggtacaaattgttc
ccaccatcatcattggttgatcccactctcgctcctttaacacgtcgggcttcccaatca
tctctggaaagttcaactgggcctccttgcattcgatcataa
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