Suncus etruscus (white-toothed pygmy shrew): 126013644
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Entry
126013644 CDS
T09902
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr03040
Spliceosome
setr05014
Amyotrophic lateral sclerosis
setr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126013644 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
126013644 (ALYREF)
03015 mRNA surveillance pathway
126013644 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
126013644 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126013644 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126013644 (ALYREF)
03041 Spliceosome [BR:
setr03041
]
126013644 (ALYREF)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126013644 (ALYREF)
TREX complex
126013644 (ALYREF)
Spliceosome [BR:
setr03041
]
Complex C
Other components
EJC/TREX
126013644 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126013644 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
126013644
NCBI-ProteinID:
XP_049632736
LinkDB
All DBs
Position
1:complement(207501172..207503050)
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AA seq
262 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGAQGGRGGGGGGAQAAAARIGRGGGPLR
NRAALARGAAGGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDF
GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRP
MNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGAFGGGGMVRRGVRGGSRGRGRGTGRSSK
QQLSAEELDAQLDAYNARMDTS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcatcaagctcaaccggagccagcgc
ggcggccgcggcggcggccgggggcgcggccgggccggcgcgcagggcggccggggcggc
ggcggcggcggcgcgcaggcggcggcggcgcggatcggccgaggcggcgggcccctgcgg
aaccgggcggccctggcgcgcggcgcggcgggcggcggcggcggcaggaaccggcctgcg
ccctacagccggcccaagcagctcccggacaagtggcagcacgacctgttcgacagcggc
ttcgggggcggcgccggcgtggagacgggcggcaagctgctggtgtccaacctggacttc
ggcgtgtcggacgcggacatccaggagctgttcgccgagttcgggacgctcaagaaggcg
gccgtccactacgaccgctcgggccgcagcctgggcacggccgacgtgcacttcgagcgg
aaggcggacgccctgaaggccatgaagcagtacaacggggtgcccctggacggccgcccc
atgaacattcagctcgtcacgtcacagatcgacacacagcggagacctgcacagagcgtg
aacagaggcgggatgactagaaaccgcggtgctggggccttcggcggcggcgggatggtc
cggagaggcgtccgcgggggcagccggggccggggacgaggcacaggccggagttccaag
cagcagctttccgcagaggagctagacgctcagctggacgcctacaacgccaggatggac
accagctaa
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integrated database retrieval system
