Suncus etruscus (white-toothed pygmy shrew): 126013656
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Entry
126013656 CDS
T09902
Symbol
CNTN6
Name
(RefSeq) contactin-6
KO
K06761
contactin 3/4/5/6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126013656 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
setr00537
]
126013656 (CNTN6)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
Contactins
126013656 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
setr00537
]
Others
126013656 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
C2-set_2
Ig_C17orf99
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
126013656
NCBI-ProteinID:
XP_049632782
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All DBs
Position
7:85660505..85915416
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AA seq
1027 aa
AA seq
DB search
MRLLWKLVILLSLIHTCASIGLNSHPTFTREPQDVTVPLEFPQPDVVLDCTAHGYPPPHY
RWKHNGMDIDFTQSSPYRLEGGSLLIIEPHANRDVGTYQCWASNSLGTSLSRKAKLQFAY
IEDFESKTRSTVFVREGQGVVLFCGLPPHFGDLSYAWTFNDNPLHVQEDNRRFVSQETGN
LYIAKMEPSDVGNYTCFITNAEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPEMREAA
KESSVKLECFALGNPVPDISWRRLDGSPLPGKIKYSQSQAILEIPHFQQEDEGSYECIAG
NLRGRNLAKGQLIFYAPPEWEQKIQNKYLSIYDNLFWECKARGKPSPWYVWLKNGERLNP
EERIQIKNGTLSITMLNMSDSGVYQCAAENKYHIIYANAELRVLASAPDFSKNPVKRVSV
VQIGGEIVIECRPTASPRATVSWKRGAESLKQSKRVHLSEEGSLKIQNVSRSDAGVYTCV
AANQFGVVRSTGTLVVKERTLIMQPPSSMDVTVGESIVLPCQVSRDPTVYVSFVWTFNGE
LIDFQKGAAHFERIGGESVGDLMVRNIQLHHTGKYVCTVKSTLEILSAAADVIVRGPPGP
PKELRVEGVSSTTSNLSWTPGSSNNSPIQEFIVQARTPFSIGWQAVSTVPEILSGSTHKA
TVAGLSPWVEYEFRVLAGNSVGIGEPSQPSELLRTKASVPVVAPAGVGGGGGSRSELIVT
WEPIPEELQNGDGFGYIVMFRPVGLVAWTVEKEPSVEASKFVYRNQSLNPLSPFEVKVGV
YNQEGEGPWSAVCIIHSGEDEPRLAPKGTSVQSISASEMEVSWEAIGWNGNTGRVLGYEV
LYWTEDSRGSVMGRMQVNSNITSQNVKGLRANTLYFAAVRAYNTAGPGPSSAPVNVTTKK
SPPSQPPANIAWKLTNSKLCLNWEHVKTMDNESAVLGYKILYRQNKQSKTHILETKNTSA
ELLVPFEEDYLVEIRTVSDGGDGSSSEEIRIPRMSSLSSRGPLQAPGRHLLSVLSICYYF
AIQPLTR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgctgtcactcatacacacttgtgcaagtatt
ggactcaacagtcatcccacattcaccagggagcctcaggatgtcaccgtacctctggag
tttccacaaccagatgttgtcctagactgcactgcccatgggtacccaccaccacactac
aggtggaagcacaatggcatggatattgattttactcagagctctccatacaggctggaa
ggaggcagcttgctcattattgagccccatgccaacagagatgtgggcacctaccagtgc
tgggcctctaattcactgggcacatctctgagtcgcaaagccaagctccagtttgcatat
attgaagactttgaaagcaagactcgcagcacagtgtttgtccgtgaagggcagggtgtg
gtgctgttctgtgggcttccaccacactttggagacttgtcttatgcctggaccttcaat
gacaacccattgcatgtccaagaggataatcggaggtttgtgtctcaggagacggggaac
ttgtacatagccaagatggagccatcggatgtgggcaactacacctgctttatcaccaat
gcagaggcacaaaggagtgtacagggcccacccacacccctggtgcagcgcacagatggt
gtgatgggggaatatgaaccgaagattgaagtgcgttttcctgagatgagagaagccgca
aaggagtcttctgtaaagttggagtgctttgcccttggaaatccagtccctgatatcagc
tggagaaggttggatggaagtccgttgccagggaaaatcaagtacagccaatcccaagct
atccttgaaatcccacactttcaacaggaagatgaaggttcctatgaatgcattgcaggc
aaccttcgaggaagaaacctggccaagggtcagctcattttctatgctcccccagaatgg
gaacaaaagattcaaaataaatacctgtctatttacgacaacctgttttgggaatgcaaa
gctagagggaagcctagtccttggtatgtctggctaaagaatggtgagcgtttgaatcca
gaggaaagaattcagataaaaaatggaactctaagcataactatgctgaatatgtccgat
tctggtgtgtaccaatgtgctgcagagaacaaatatcatatcatttatgcaaatgcagaa
ttgagagtattagcctcagctcctgacttctccaaaaatcctgtaaagagagtttcagtg
gtccaaattggcggggagattgtgattgaatgcagacctacagcttcccctcgtgccact
gtctcctggaaaagaggagccgagagtcttaagcaaagcaaaagagtgcatctctcagag
gaaggcagtcttaagatccagaacgtgagcagatctgatgctggggtctatacctgcgtg
gctgcaaatcagtttggtgttgtgaggagcactggcactctggtagtaaaagaaaggact
ctgatcatgcagccaccttccagcatggatgtcacagtgggtgagagcatcgtacttcca
tgccaggtgtccagagaccccacagtctatgtcagctttgtgtggacattcaatggggag
ctgattgacttccagaaaggagcagcccactttgaaaggattggaggagagtctgttggg
gacttgatggttaggaatattcagttacatcacacaggaaagtatgtctgcaccgtgaaa
tcaactctggaaatcctatctgcagcggcagatgtcattgtaagaggccccccaggtccc
cccaaggaattgagggtggaaggtgtttccagcacaacctcaaacctaagctggacacca
ggttccagcaacaacagccccatccaggagttcattgtccaggcgaggacgcccttctcc
ataggctggcaggccgtgtccacagttccggaaatcctcagtggcagcacacacaaggcc
acagtagctggcctgagtccttgggtggaatatgaattccgtgtacttgcgggaaacagt
gtcggcattggggaacccagtcaaccatcagagctgttaagaacaaaggcatcagtcccg
gtggtggctccagctggtgttggtggaggtggagggagtcgctcagaactcatcgttacg
tgggagcccattccagaggagctgcagaatggagacggcttcggctatattgtgatgttc
cgtccagtgggattagttgcctggaccgtggagaaagagccatcagtggaggcctcaaag
ttcgtgtataggaaccagagcctcaacccactgtccccttttgaagtcaaagtgggtgtg
tacaaccaggagggggaaggtccgtggagcgctgtctgtattatccactctggggaggac
gagcctcgcctggcccccaaagggacatccgtgcagagtatctcggcttcagaaatggaa
gtgtcctgggaagccattggctggaatgggaacacgggcagagtcctgggctatgaggtt
ttgtactggacagaggactccagaggttctgtgatgggcaggatgcaggtcaacagtaac
atcacctcccagaatgtcaaagggctgcgtgccaacactctctattttgctgcagtgaga
gcctacaacacagctgggccaggcccctccagtgcaccggttaacgtcactaccaagaag
tccccaccaagccagccaccagcaaatatagcctggaagctgacaaactccaagttatgt
ctcaattgggagcatgtgaaaaccatggacaatgagtcagctgtactgggttacaagatc
ttgtatcggcagaacaagcagagcaaaactcacatcctggaaaccaaaaacacctcagca
gagctcctggtccccttcgaagaggactacttagtggagatcagaacagtcagtgatggg
ggtgatggaagcagcagcgaggagatcaggatcccccggatgtccagtctgagctccaga
gggccattgcaagcacctggcaggcacctcctgtcagtcctcagcatttgctactatttt
gctattcagcctctcaccagataa
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