Suncus etruscus (white-toothed pygmy shrew): 126013659
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Entry
126013659 CDS
T09902
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126013659
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
Contactins
126013659
BRITE hierarchy
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_C17orf99
Ig_5
Sp38
V-set_CD47
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
126013659
NCBI-ProteinID:
XP_049632784
EnsemblRapid:
ENSSRTG00000027777
LinkDB
All DBs
Position
7:87123665..87792861
Genome browser
AA seq
1026 aa
AA seq
DB search
MRLPWGLLVLQPFMMCLTDDPTLRGPVFLREPSPIMFPVDSEEKKVKLSCEVKGNPKPHI
RWKLNGTDVDIGMDFRYSIVEGNLLINNPNKTQDTGTYQCIATNSFGTIVSREANLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELSYAWIFNEYPSTQDSRRFVSQETGNLY
IAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLRLRNDGAMGEYEPKIEVQFPDTVPTARG
SSARLECFALGNPVPSISWRRADGKPIAKKARRHKSNGILEIPNFQQEDAGLYECVAENS
RGKNIARGQLTFYAQPNWTQKIHDLQVAMEESVFWECRASGRPRPSYRWLKNGEPLLPRE
RIQVEQATLNITTVNLSDAGMYQCVAENKHGVIFSSAELSVLAAGPDFSRTLLKRVTLAK
VGGEVVIECKPKASPKPVYTWRKGRDRLRESERITVSEDGSLRISNVTKSDAGSYTCVAT
NHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWFFNGHLI
DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCNVQTSVDQLSATATLIVRGPPGPP
EAVTIDEITDTTAQLSWRPGPDNHSPVTLYVIQARTPFSVGWQAASTVPELIDGRTFTAT
VVGLNPWVEYEFRTVAANAIGIGEPSQPSERRRTEEALPEVTPANVSGGGGSKSELIITW
ETVPEELQNGRGFGYVVAFRPYGKTVWMLTVLASADASRYVFRNESVRPFSPFEVKVGVF
NNKGEGPFSPATVVYSAEEEPTRPPASIFARSLSATDIEVFWASPQEKNRGRIQGYEVKY
WRHDDKEENARKIRTVGNQTSTRISNLRGSVLYHLAVKAYNSAGTGPPSATANVTTRKPP
PSQPPGNIIWNSSDSKIILNWDQVKARDNESEVKGYKVLYRWDRQSSMSVIETNQTSVEL
SLPLDEDYIIEIRPISDGGDGSSSEQIRIPKISNAYARGAGPSTSNACTLSAISTIMISL
TARSSL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgccatgggggctgctggtcctgcagcccttcatgatgtgcctcacagatgac
cccactcttcgtggccctgtgtttctccgagagcccagccccatcatgttcccagtggac
tcagaggaaaaaaaggtgaagctcagctgcgaggtgaagggaaaccccaagcctcatatc
aggtggaagttaaatgggacagatgttgacattggcatggatttccgctacagcattgtt
gaaggcaacttattgatcaataatcccaataaaacccaagatactggaacataccagtgc
atagcaacaaactcgtttggaacgattgttagcagagaagcaaatcttcagtttgcgtat
ctcgaaaactttaagacgagaacaagaagcaccgtgtcagtgcggcagggccaggggatg
gtgctgctgtgtgggccaccaccccactcaggagagctgagctatgcctggatcttcaat
gagtacccttccacccaggacagccgccgcttcgtctctcaggagaccgggaatctgtac
atcgccaaggtggagaagtctgacgtcggcaattacacctgtgtggtcacaaacaccgtg
acaaaccacaaggtcctggggccacctacaccactcaggctgagaaacgatggcgcaatg
ggtgaatacgagccgaagattgaagtgcagttcccggacacagtgcctactgcccgaggg
agcagtgcccggctggagtgctttgccctgggcaacccagtgccatctatcagctggaga
agggctgatgggaaacccatagccaagaaagccagaagacacaagtcgaatgggattctg
gagatccccaactttcagcaggaggatgctggcttatatgaatgtgtggctgaaaattca
agagggaaaaacatagcaaggggccaattgacattttatgcccaaccaaattggacacag
aagattcatgacctgcaggtggccatggaggagagtgtgttctgggagtgcagggctagt
ggtagaccccggccgtcataccgctggctgaagaacggagagcctctcttgccccgggag
agaatccaggtggagcaggccacgctcaacatcaccacggtcaacctgtcggatgcaggc
atgtaccagtgtgtggctgagaacaagcatggcgtcatcttctccagtgcagagctgagc
gttcttgctgctggaccggacttttcaagaaccctcttaaaaagggtcactctggccaaa
gtgggaggcgaggtggtcatcgagtgcaaacccaaggcttctcccaagccagtctacacc
tggaggaaaggaagggacaggctgagggaaagtgaaagaattaccgtttctgaagatgga
agcctcagaatcagcaatgtgactaaatcagatgcggggagttatacctgtgtagccact
aaccattttggaactgctagcagtactggaaacttggtagtaaaagacccaacacgggtg
atggtaccaccgtccagcatggatgtgacagtgggagagagcattgtgctgccctgccag
gtgacccatgaccactccttggacatcgtgttcacttggttcttcaacggccacctgata
gactttgacagagatggggaccacttcgaaagagttggagggcaggattcagctggtgac
ttgatgatccgcaacatccagctgaagcatgctgggaagtatgtctgcaacgtgcagacc
agcgtggaccagctgtctgcaactgccaccctcatcgtgagaggtcctccaggtccccct
gaggctgtgaccatcgatgaaatcacagacaccacagcacagttatcctggagacccggg
cctgacaaccacagcccagtcaccttgtacgtcatccaggccagaacacctttctctgtg
ggctggcaggctgccagcacagtaccagaactcattgatggcaggaccttcacagccact
gtagtgggtttgaacccctgggtagagtacgagttccgcacggtggctgccaacgcaatt
ggcatcggggagcccagccagccctcagagaggcggaggacagaggaagctctccctgaa
gttactcctgccaatgtcagtggaggtggaggcagcaagtcagaactgatcatcacgtgg
gagacagtgcctgaggaacttcagaatggccgtggctttggctatgtggtagccttccgg
ccctatgggaagacagtatggatgctgacggtgctggcctcagccgatgcatccagatac
gtgttccggaatgagagtgtacggcccttctccccgttcgaggtcaaggtgggcgtcttc
aacaacaagggagaaggccccttcagccctgccaccgtggtctactcggctgaggaagag
cccactcggccaccagccagcatctttgccaggagtctgtctgccactgatattgaggtt
ttctgggcctcccctcaggaaaagaatcgaggtcggattcagggatatgaggttaaatac
tggagacatgatgacaaggaagaaaatgctagaaaaatacgaacagttggaaaccaaaca
tcaacaagaatcagcaacttgagaggcagtgtcctgtaccatcttgctgtgaaggcttat
aactcagcagggacaggcccacccagtgcaacagccaatgttactaccaggaaaccaccc
cccagccagccccctgggaacatcatctggaattcctcggactccaaaatcatccttaat
tgggatcaagtaaaggcccgggacaatgagtctgaggtgaaagggtacaaggttctatat
cgatgggacagacagagcagtatgtcggtcatcgagacaaaccagacgtcggtggagctg
tcactgcccctggatgaggattacatcattgagatccggcccatcagtgatgggggagat
ggaagcagcagtgagcagatccgcatcccaaaaatctccaatgcctatgccagaggggcc
ggcccatccacctccaatgcttgcacactgtcggccatcagcaccatcatgatctccctc
acagccaggtccagcttatga
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