Suncus etruscus (white-toothed pygmy shrew): 126013832
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Entry
126013832 CDS
T09902
Symbol
ABCA13
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 13
KO
K05647
ATP binding cassette, subfamily A (ABC1), member 13
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126013832 (ABCA13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setr02000
]
126013832 (ABCA13)
Transporters [BR:
setr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126013832 (ABCA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_29
RsgA_GTPase
CENP-R
Pepco
Motif
Other DBs
NCBI-GeneID:
126013832
NCBI-ProteinID:
XP_049632987
LinkDB
All DBs
Position
7:complement(6031595..6320484)
Genome browser
AA seq
2504 aa
AA seq
DB search
MEHNTLMNIFNTFLENGNLTPVLFFAEFFWPCILFMILTILRFQELPRHRETCYLKPRDL
PSRGIFPFIQSLLCNTGSRCSNISYARSTEHSFIXNSFRSWAADKKVKDLVFLKHIQELT
EDVYEIMDKAKILDNIWEERYKAPGSSYSSSFLSMELNKTEEVILKLEDLHQRTYIWDFL
LLLPRVYKNTVHVEDGLHGIVDLLRAVLNSLTALEDLDWLPLNHTLLTASEIMLNMTIST
LAFLQKYGLASAKSESNFSLRNMVWDPQKVQRDLESSFDFDNLHVEQILNYSTELQEVFD
QWHQGKPMQMVFDETEHKMESFRNQSEENNQLWKVPDVLHDSLLLLDSLTAESSKGNHTS
PKNVSAMCQDFRQSLKSPETTITQQKVQLLILKMILIFAENYVLTKNTLCVSLICQQDDI
RHLIIYALQGVTLVYDHYTEMEKIWFSSHQINCEDLSRNISRTLKSFKDMLKNATDQNCE
CKPSLDNVQLHMYRFIQSLGKILLSRYPMKAFINNFTGMGDIKVKDLMKNITKLTEELQS
SIHISNETLSNVLEANVSHSQVILSALTIALSGRCDWNMLYLLLEFPETNTSWFAIKELC
GMPASKVYSLIILMSRNLNLRNVLYKTMIPLDASGMLGSLLDLVSSLNRLLSKAGRTLEY
LPEFLHSFQITSLLDKSNFQQVPQDNQARNSAFGLFQSVMKMICKEKGSFLSNTNTFIDL
PRVDELLEDDKEKFHIPENSTLFCLKLYQEILRFPNGALIWYFLKPILHGKILYTPNTPD
INKVIQKANYTFNFVDKFKALTQRLLKMSSIFGSNGNDQMLNKLQEVLRNKFIRNYIENQ
LHIDVDKLIENLQMFGEMFHEALNNTGAGDISFLGHILVNLSSCVSLNRFQPMDSVTVLN
SKAREFMQKNDFLASIIFNKSSADKNFTSESLQLPSNITYTIRTSVLYSFRTDVVKNPFW
KFHPQSLPTDGFKYNYVFVPLQDMIERAIISVQTGQEATEPGTQAQAIPYPCHTSDLFLN
NIGIFLPLIMMLTWMVSVASMVRKLVYEREIQIEEYMKIMGVHPIIHFLAWFVENMAMLT
LSSAMLAVILKTTGIFAHSNAFIIFLFILNFGVSVAMLSYFLSAFFNQANTAALCTSLIY
MISFLPYIVLLILHNQLSVVIQTFLCLLSTTAFGQGIFFITFLEGQEAGIQWSNINEAPE
QGGMTFTWVSCMILLDSGLYFLCGWYLSNLIPGTFGLRKPWNFPFTESYWRNICGLMQKR
PHMLSSNLFFNEMFDIKGSSLQNMKGKLEDCPPSVALVSVTKKYKYNKAIDNLTLTFYQN
QITALLGTNGAGKTTVISMLTGLYPPSSGSIIINGKSLQTDLSSIRTELGVCPQRDVLFD
NLTVLEHLLLFASIKAPQWTQKELQQQVNKTLQDVGLIQQKHKQIHALSGGMKRKLSIGI
AFIGHSRVVILDEPTSGVDPCSRRSIWDILLKYREGRTIIFTTHHLDEAESLSDRVAILQ
QGQLRCCGSPFYLTETYSKGFSLTLTKQTSVMEEQDPKDISCATSLIQSYIPQALLKDTS
DGQITYTIPNDVDRIGFQGLFQALDQNLHQLHLTGYGISDTTLEEVFLMLMQDTEKKIDI
TPESKSELQSHMPEQSTASHYGAPMVTPHIQGIHLLLEHMAALLRKRLLHTFRAWKRTLS
DLLLPVLFVALAMALFMVKPLVVEYPSLKLTPGHYERAESYFFSNEGQDTKFAHILLRKF
RDQDLLCADSNPDMMNSSCWHTDPISHYVSCGCLQCTNRSAPYLTNHLGHTLLNLTAFNL
EDYLLMPHKKPRLGGWSFVVKIPDEVNDSNSKRSKQIPLEKVWYNQKGFHSLPSYLNHLN
NIIYWRFLPPGVDWKQYGITLYSHPYGGALLNEDKILEGIRQCGVALCIVLGFSILSASI
GSSVVRDRVTGSKRLQHISGLGYRTYWITNFLYDLLFYSISVCLCVAVIVAFQLSAFTFR
ENLAATALLLALFGYATLPWLYLITRIFSSPDIAFISYVSLNFIFGLCTMLMTIVPRLLA
IISKSQYMQNIYNVLKWAFTIFPQFCLGQGLIELCYNQIKFDLTHSVGMDSYVSPFEMNF
LGWIYVQLFLQGTIVLILRILLHWDLLQKSRGHPNLQGTVTSSKDIDVEKEQMRVLKGRT
DRDLLVLCNLSKNYRSFLKKTTAVHDICLGIPRGECFGLLGANGAGKTTTFKMLNGDIAP
TSGQAIVRNSIGEDVDPSYAGKAGVRIGYCPQMDALDELLTGWEHLSYYCRLRGIPKSCI
PQISEDLVQRLHLKAHVDKPVATYSGGTKRKLSTALAMLGKPDLLLLDEPSSGMDPCSKR
YLWKTIMKEVQEGCAAVLTSHSMEECEALCTRLAIMINGSFSCLGSPQHIKNRFGDGYTV
RVWLNKDTDQYRNVSDFLKLHFPEIQFKGQRLHLLEYHVPKRWVCLADLFTVLESNKAIL
NIKYYSINQTTLDQVFINFATEQQQSTPSTLHVSPDNYQPRPLQ
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaacaccttgatgaatatttttaacacatttttagaaaacgggaacctaact
ccagttcttttctttgcggaattcttctggccatgtattctgtttatgattctgacaatt
cttcgctttcaagaacttcccagacatcgagaaacatgttatttgaaaccccgagatctg
cccagccgtggtattttcccttttattcaaagtcttctttgcaacactgggtcgaggtgc
agtaacataagctatgctaggtcaacagagcattcgtttatttaaaattcatttagatcc
tgggctgctgacaagaaggtcaaagacttggtcttcttaaaacatatacaggagcttaca
gaggatgtctatgaaattatggacaaggcaaaaattttagacaatatttgggaagaaaga
tacaaggctccaggttcttcttacagttccagctttttatcaatggaactcaataagact
gaggaggtgatattgaaattggaagaccttcatcagcgaacctatatttgggacttccta
cttttattaccgagagtatataaaaatactgttcatgttgaagatggccttcatggtata
gtggatcttctccgggcagtgttaaattccttaacagctctggaagacttagattggctg
ccactcaaccacactttattaacggcttctgaaattatgctgaacatgacaatttcaaca
ctggcatttcttcagaaatatggattagcatctgctaagtcagaatccaacttttccttg
cgtaatatggtttgggatccacagaaggtccagagagacttggaatcctcatttgacttt
gataaccttcatgttgaacaaattctaaattattcaactgaactacaagaggtatttgat
caatggcatcaaggtaaaccaatgcagatggtatttgatgaaactgaacacaaaatggag
tcattcaggaatcagtctgaggaaaataatcagctatggaaggtgccagatgttttgcat
gatagccttcttcttctggacagtttgacagcagagagctccaaaggcaaccatacatct
ccaaagaatgtgtctgcaatgtgtcaggatttcaggcagtctttaaagtccccagaaaca
accataactcagcagaaagtgcagttgttgattctgaaaatgatcttgatatttgcagaa
aactatgtcttaacgaagaatactctgtgtgtttctctgatttgccagcaagatgacata
aggcatctcattatatatgctttacaaggagtcacgttggtgtatgaccactacacagaa
atggagaagatttggttttcttctcatcaaataaattgtgaagatcttagcagaaacatt
tctagaacattgaagagcttcaaggacatgttgaaaaatgccactgatcagaattgtgaa
tgtaaaccttcactagacaatgttcagcttcacatgtacaggtttattcaaagccttggg
aaaattttattgtcaagataccccatgaaggcatttataaacaatttcacaggaatgggg
gatataaaagtaaaagatttaatgaagaatatcaccaagctaaccgaagagcttcaatct
tccattcatatctcaaatgaaactctaagtaatgttttagaagctaatgtttcccattca
caggttatcttgagtgccctcactatagctttatctggaagatgtgactggaacatgctt
tatctcctgctggagtttcccgagactaacacttcttggtttgcaataaaagaactgtgt
ggcatgcctgcatccaaagtgtattcgctcattatattgatgagtcggaacctgaacctt
cgaaatgtcctttacaaaactatgatccctctagatgccagtggcatgcttggctccctc
ttggacctcgtttccagcctcaaccgcctgctttcaaaagctggccgcacccttgaatac
cttcctgaatttcttcactcgttccaaatcacttccttgctagataagtccaacttccaa
caggtcccacaagataatcaggccagaaattcagcctttggtttatttcagtctgtgatg
aagatgatttgcaaggaaaaagggtctttcttgagcaatactaacacatttattgacctg
cctagagttgatgaacttttggaagatgacaaagaaaagttccacattcctgaaaactca
acactcttttgcttgaagctttatcaggaaattctacggtttccaaatggtgctttgatc
tggtatttcctaaagcccatattacatggaaaaatattgtacacaccaaacacaccagat
attaataaggtcatccaaaaggctaattatacttttaattttgtggataagtttaaggct
ttaacccaaagattgctaaaaatgtcgtctatatttggaagcaatggaaatgatcagatg
ctaaacaaactgcaggaagtcttaagaaacaaatttataagaaactacatagaaaatcag
ttacacattgatgtagacaaacttattgaaaatctccaaatgtttggagagatgttccat
gaggcattgaacaacacaggtgctggagacatcagtttccttggccacatcttggttaat
ctctcttcttgtgtgtcattaaatcgttttcagcccatggactctgtcaccgtcctaaac
tctaaagctcgggaattcatgcaaaaaaacgatttcttggccagtatcattttcaacaag
tcttctgctgataagaacttcacatcagaatctctccagctgccaagcaatatcacatac
acaattcggaccagtgtgctctacagcttcaggactgatgtggtgaaaaatccgttttgg
aagtttcatccacagagcctcccgactgatggattcaaatacaactatgtatttgtccca
ttgcaagacatgatcgaaagagccatcatttctgtgcaaactgggcaagaagccacggag
ccaggcacgcaggcacaggcaatcccatatccctgtcacaccagtgacctattcttgaac
aacatcgggatctttttacctcttattatgatgcttacatggatggtgtcggttgccagc
atggttcgaaagttggtttatgagagagagatccagatagaagagtacatgaagattatg
ggagtgcacccaataatccattttctggcttggttcgtggagaacatggctatgttgact
ttgagcagtgctatgctggccgtcatactgaaaacaactggcatctttgcacacagcaat
gctttcattatttttctctttattctcaattttggggtatcagttgccatgctaagttac
ttcttgagtgcatttttcaatcaagcaaatacagcggctctgtgtacaagcctaatatat
atgatcagttttttgccttatattgttctgctgattctacataaccaattgagtgtagtc
attcagacatttctgtgcctgctttctaccactgcctttggacaaggaatattttttatt
acattcttagaagggcaagaagcaggaattcagtggagtaatataaatgaagccccagaa
caagggggtatgacatttacctgggtttcctgcatgattttacttgattcgggtctttat
tttttatgtggatggtatctcagcaacttgattcctggtacttttggtttaagaaagcca
tggaattttccctttactgagtcctattggaggaatatatgtggtttgatgcagaaaagg
ccacacatgctatcttccaatctgttcttcaatgagatgtttgacataaaagggtcatcg
ttgcaaaatatgaaaggaaagcttgaagattgtcccccaagtgttgcgctggtatctgtt
actaagaagtataaatacaacaaagccattgataatctcactcttactttttaccaaaac
cagattactgccctgctgggaaccaatggtgctggaaagacaactgtcatatctatgctg
actggactgtatcctccttcttctggaagcatcatcattaatggcaagagcctgcagaca
gacttgtcttccatcagaaccgagttgggggtgtgtcctcagcgggatgtcctgtttgac
aacctcactgtgttggagcatctgctgctgtttgcttctataaaagcaccacaatggacc
caaaaggagttgcaacagcaagtcaacaaaactctccaggatgttggtttaattcagcaa
aagcacaaacaaatccatgctctttctggaggtatgaagaggaaactctccattggaatt
gctttcattggtcactccagggttgtgattctagatgagcccaccagtggggtggatcct
tgctctcgtcgcagcatctgggatattcttctcaagtatagagaaggtcgaacaatcatc
ttcacgacccatcacctggatgaggctgaatccctcagtgaccgtgtggcgattctgcaa
caggggcagctacgttgctgtgggtctcccttttacctgactgagacttatagcaagggg
tttagcttaacactcacaaaacagacttctgttatggaggagcaagatccaaaagacata
tcttgtgccacatctctgatacagagttatatcccacaagcacttctcaaggacaccagt
gatgggcagataacctacaccatccccaatgacgtggacagaattgggttccaaggactc
ttccaagctctggatcaaaatctccatcagttgcacctaacaggctatgggatttcagac
accactctagaagaggtgtttttgatgcttatgcaagataccgaaaagaaaattgacata
actccagaatccaagtcggaactgcaatcccacatgcctgaacagagcacagctagccac
tatggtgctcctatggtgacgccacacatccagggtatccatctgcttctggaacacatg
gctgccctccttaggaagagacttcttcacacgttcagggcctggaaacgcactctctct
gacctactgttgccagtcctctttgtagccttggccatggctctgtttatggtgaaacct
ttggtcgttgagtacccatccctcaaactaacacctggccattatgaaagagcagaaagc
tactttttcagcaatgagggccaagacacaaaatttgctcacatacttttgaggaagttt
agagaccaggacctgctctgtgctgactcaaacccagacatgatgaattcttcatgctgg
catactgatcccatttctcactatgtttcttgtggctgtctgcaatgtacaaacagaagt
gctccttacctaaccaatcacctaggtcatactctgctaaacctaacagcctttaacttg
gaggattatttgttgatgccacataaaaaaccaaggcttggcggttggtcttttgtggtg
aaaataccagacgaagttaatgactccaactcaaaaagatcaaaacaaatacctttagaa
aaggtgtggtataatcagaagggctttcattctctcccttcatacttaaatcatctaaac
aacattatatattggagatttttacctcctggggtggactggaaacaatatggaataacc
ctgtatagccacccatatgggggagcattgctgaatgaagacaagatcctggagggtatt
cgacaatgtggagtggccctctgcattgtgctgggcttttctatcttatctgcatcaatt
ggtagctctgtagtgagagacagggtgacaggatccaagcggttgcagcacattagtggc
ctgggctacaggacttactggatcactaatttcctctatgacttgctcttttactcgatt
tccgtctgcctgtgtgttgctgttattgtcgcctttcagttatcagcttttacttttcgt
gagaacttggcagccacagccctcctgctggcactttttggatatgcaactctcccatgg
ctgtatctgataaccaggatcttctccagtccagatattgctttcatttcttacgtgtct
ttgaacttcatctttggtctctgcaccatgctgatgacgatcgtgccccgattattggca
atcatttccaaatctcagtatatgcagaacatttataatgtgctgaagtgggccttcact
attttccctcaattttgtctgggtcagggactaatagaactctgttataaccagataaaa
tttgacttgactcatagtgtcggtatggattcctatgttagtccctttgaaatgaatttc
ctgggctggatctacgtacaattgtttttacaaggcactattgttctcatcttgaggatt
ctccttcactgggatcttctgcagaagtcaagaggtcaccccaacctccaaggcacagtc
acatcttctaaggatatagatgttgagaaagagcaaatgagagtgctgaaaggaagaact
gatagagacctccttgtgttatgcaacctaagtaaaaattaccgaagcttcctcaagaaa
actactgctgtgcatgatatttgtttgggcataccaagaggagagtgctttggacttcta
ggagcaaatggagctgggaaaaccactacattcaaaatgttaaatggggacatcgctcca
acttcaggccaggccatcgtcaggaactctataggagaagatgtggacccctcttatgcg
ggcaaagcaggagttagaataggctattgtccccagatggatgccctggatgaactccta
actggctgggagcacctcagttattactgtagacttcgaggaataccaaaatcttgcatt
cctcagatatctgaggatcttgtgcagcggttgcatctgaaagctcatgtggacaaacct
gtggctacttatagtggaggaacaaagcggaaactctcgacagcactggccatgcttggc
aaacctgatcttctattattggatgagcccagctctgggatggatccttgctctaagcga
tacctgtggaaaacaataatgaaagaggttcaagaaggttgtgctgccgtactgacttct
cacagcatggaggaatgcgaggctctttgtacacggcttgccataatgattaatggcagc
ttcagctgtcttggttctccccagcatattaagaacaggtttggtgatggctatacagtt
cgagtttggctcaataaagatacagaccaatatagaaatgtttctgacttcttgaagctt
cattttccagaaattcagtttaaggggcaacgccttcatttattggaatatcatgtgccc
aaacgatgggtgtgcttagccgatcttttcacagttctcgagagcaataaggccatcttg
aatatcaaatattactcaattaatcaaaccactttggatcaggtatttattaattttgcc
actgagcagcagcaaagtacaccttctactctccacgtatctcctgataattatcaacca
cgtcccttgcagtaa
DBGET
integrated database retrieval system
