Suncus etruscus (white-toothed pygmy shrew): 126013837
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Entry
126013837 CDS
T09902
Symbol
TUBB1
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04145
Phagosome
setr04540
Gap junction
setr04814
Motor proteins
setr05010
Alzheimer disease
setr05012
Parkinson disease
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126013837 (TUBB1)
09142 Cell motility
04814 Motor proteins
126013837 (TUBB1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126013837 (TUBB1)
05012 Parkinson disease
126013837 (TUBB1)
05014 Amyotrophic lateral sclerosis
126013837 (TUBB1)
05016 Huntington disease
126013837 (TUBB1)
05020 Prion disease
126013837 (TUBB1)
05022 Pathways of neurodegeneration - multiple diseases
126013837 (TUBB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126013837 (TUBB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126013837 (TUBB1)
04147 Exosome [BR:
setr04147
]
126013837 (TUBB1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
126013837 (TUBB1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
126013837 (TUBB1)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126013837 (TUBB1)
Exosomal proteins of colorectal cancer cells
126013837 (TUBB1)
Exosomal proteins of bladder cancer cells
126013837 (TUBB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_2
Misat_Tub_SegII
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
126013837
NCBI-ProteinID:
XP_049632991
LinkDB
All DBs
Position
7:complement(6936717..6945631)
Genome browser
AA seq
448 aa
AA seq
DB search
MREIVHIQIGQCGNQIGAKWWRVIGEEHGINELGSYGGDCALQLERISVYYNEAHGKKYV
PRAVLVXLEPGTMDSIRSSKLGARFQPDSFVHGNSGAGNNWAKGHYTEGAELVDSVLDVV
RRESEACDCLQGFQVVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV
EPYNAVLSLHQLLENADACFCIDNEALYDICFRTLKLSTPAYGDLNHLVSLDHEWHLHRR
WRFPGQLNADLRKLAVNMVPFPRLHFFMPCFAPLTAQGSQALPCSSVAELTQQMFDARNA
MAACDPRRGRYLTVAXIFRGRMSMKEVERALLSVQTRHSSCFVEXSPTTVKVAVCDIPPR
GLPMAATFIGNNTSYQELFSRVSEQFSAMFKRRXFVHWYNGRGMDVGEFVEAEGNIHDLV
SEYQQFQDARAVLDEPGEALGGMQSLES
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtccacattcagatcggccagtgtgggaaccagattggagccaagtgg
tggagggtgatcggcgaggagcacgggatcaacgaactggggagctacggcggggactgt
gccctgcagctggagcggatcagcgtgtactacaatgaggcccatggtaagaagtatgtg
cctcgagcagtgctagttnacctggaacccgggaccatggacagcatccggtccagcaag
ctgggagcccgcttccaacctgatagttttgttcatggaaactctggtgctggcaacaac
tgggccaagggccactacacggagggtgcagagctggtggactcggtcctggatgtggtg
cggcgggagagcgaggcctgcgactgtctgcagggcttccaggtcgtgcactcgctgggc
ggtggcacgggttcgggcatgggcacgctgctgatgaacaagatccgtgaagaataccct
gaccgcatccttaattccttcagtgtcatgccctcacccaaggtgtccgacacagtggtg
gaaccctacaacgccgtgttgtctctgcaccagctcctggagaatgccgacgcctgcttc
tgcatagacaacgaggcgctctacgacatctgtttccgcaccctcaaactcagcacaccc
gcttatggcgacctcaaccacctggtgtcgctggaccatgagtggcatctccaccgtcgc
tggcgcttcccaggccaactcaacgctgacctgcgcaagttggctgtgaacatggtcccc
ttccccagattgcatttcttcatgccctgcttcgcacccctcacggcacagggcagccaa
gccttaccgtgctcgtcggtggccgagctcacccagcagatgttcgatgcccgcaatgcc
atggccgcctgtgaccctcgccgtggccgctacctgactgtggccntcatcttccgtggc
cgcatgtccatgaaggaggtggaacgagcactgctgagtgtgcagacccgccacagcagc
tgcttcgtggagtgatccccaacaacggtgaaggtggccgtatgcgacatcccaccccgg
ggcttgcccatggctgccaccttcatcggcaataacacgagctaccaggagctgttctcc
cgtgtctccgagcagttctcagccatgttcaagagaaggncctttgtgcactggtacaac
gggcgagggatggatgtgggcgagttcgtggaagccgaaggcaacatccatgacctggtg
tccgagtaccaacagttccaagatgccagagctgtgctggatgagcctggagaggcgttg
ggggggatgcagagcttggaatcttga
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integrated database retrieval system
