Suncus etruscus (white-toothed pygmy shrew): 126013840
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Entry
126013840 CDS
T09902
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126013840 (CTCFL)
03036 Chromosome and associated proteins [BR:
setr03036
]
126013840 (CTCFL)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126013840 (CTCFL)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126013840 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2HE
zf-Di19
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
Zn_ribbon_8
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
126013840
NCBI-ProteinID:
XP_049632995
LinkDB
All DBs
Position
7:7763705..7784475
Genome browser
AA seq
716 aa
AA seq
DB search
MGCPGELLPPTLPADPSPSPPGHPQNKPRPQLLPLAPPLHEPSPRMRLAPRTLPASIGLA
RAATRSACRALPGGAGQCGGQRKVTPGGQPVLMATPGHFTQIKKMEMQGAFPEQPAVKEE
EEEEKTACSQYPGSWDLGLEGPEGLQVPEVAQEVVLSRTSDQEPDLTLQLTNERAELLAL
GCLMPGFQEAPVMQPQAAGNAATVMQQEGGATAEMMQQWAGGPLLSLQPPSVCFTINLQE
GVFELQQILGLLVGNAQGEPKFADVLELERSEQQSAEELTIQPPVPLFLLEVMPREERRD
KITFTTSNLTVEEPGDKPVAAAALNDPTKAAGMKRTFQCKLCDFTTSRASSLTRHMKTHT
DEKTQACHLCPKTFRTISLLRNHINTHTGTKPYKCGDCDMAFVTSGELIRHQRYKHTHEK
PFKCSQCGYESVEASKLKRHVRTHTDERPFSCCQCSYASRDAYKLKRHMRTHTGEKPYEC
SVCHSRFTQSGSLKSHMLQKHSDNAPKYECPHCATKIARKSDLSVHVRNLHSHLSVAVKC
RFCPATFHERYALLQHQKTHQNEKRFKCTYCNYACKQEYHLIVHIRTHTGEKPFSCTICS
KNFLKKQLLTHHNQKYHDPSFVPTVFQCPHCAKGFSRWDNMQKHSKKCSLLEKGREAKAA
QPSSADSASVSTAPEAESTQEEPMPGGSSDSPAEAQGGLTPKEAVSCEMMLRMMEH
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcccaggcgagctgctaccccccacactccctgcagacccctccccatctcct
ccaggacacccccaaaacaagccccgcccccagctcctccccctggccccgcccctgcac
gagccaagcccgcgcatgcgccttgctcctcgcaccctgccagcgtccatcggcttggcg
cgagcagcaacacgaagcgcctgcagagccctgcccgggggtgctgggcagtgcggtggg
cagcgcaaagtcacgcctggaggtcagccagtcttaatggccacccccgggcacttcacc
caaatcaagaagatggaaatgcaaggggcatttccagagcaacctgcagtgaaagaagag
gaggaggaggagaaaacagcatgcagccagtacccaggttcctgggatctgggccttgaa
ggccctgaaggcctccaagtccccgaggtggcccaggaggtggtgctgagcaggaccagc
gaccaggagccagacctcacgttgcagcttaccaacgagagggccgagctcctggccctg
ggctgcctgatgcccggctttcaggaggccccagtgatgcagccacaggccgccggcaat
gctgcgacagtgatgcagcaggaaggaggcgccactgcagagatgatgcagcagtgggca
gggggccccctgctgagtctgcagccaccctcagtctgcttcaccatcaacctgcaggag
ggggtcttcgagctgcagcagattctagggttgctggtgggcaatgcccagggagaacca
aagtttgccgacgtgctagagctggaaaggagtgagcagcagtcggctgaggaattgacc
atccaacctcctgtaccactctttcttctggaagtcatgcctagagaggagaggagagat
aagattaccttcacaacttctaacctgacggtggaagaaccaggagataagccggttgca
gccgctgcactcaacgatccaacaaaggctgcaggaatgaagcgaaccttccagtgcaaa
ctctgtgacttcaccacatcccgagcaagcagcctcacccggcacatgaagacgcacacg
gatgagaagacgcaagcctgtcacctgtgtcccaagaccttccgcaccatctccctgcta
cggaaccacatcaatacacacacagggaccaagccgtacaagtgtggagactgtgacatg
gcttttgtcaccagcggcgagctcattcggcatcaacgctacaagcacacccatgagaaa
cccttcaagtgctcccagtgcggatacgagagtgtagaggcgagcaagctgaagcgccat
gtccgcacccacacggatgagaggcccttcagctgctgccagtgcagctatgccagcagg
gacgcctacaagctcaagcgtcacatgaggacacacacgggtgagaagccctacgagtgc
tccgtctgccactcgcgcttcacgcagagtggctccttgaagtcccacatgctgcagaaa
cacagtgacaacgcccccaagtatgagtgtccccactgcgccaccaaaatcgcccggaag
agcgacttgagcgtccatgtgcgcaacctgcacagccacttgtctgtcgctgttaagtgt
cgcttctgcccggccacattccacgagcgttacgccctcctgcagcaccagaagacacac
caaaatgagaagcgtttcaagtgcacgtattgcaactacgcttgtaaacaggaataccac
ctcatcgtgcatatacgcacccacaccggggagaagcccttctcctgcacgatctgcagc
aagaacttcctgaagaagcagctgctcacgcaccacaaccagaaataccacgaccccagc
ttcgtgcccaccgtgttccagtgcccacactgtgccaaaggattctcccgctgggacaac
atgcagaagcactcaaagaagtgctctctgttggagaaggggagagaggcgaaggcggcc
cagccgagcagtgcagacagtgcctccgtctccactgccccagaggctgagagcacacag
gaagagccaatgccaggaggctcaagtgacagccctgccgaggctcaaggaggtctgacc
cccaaggaggctgtgagctgtgaaatgatgctgcgtatgatggagcactga
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