Suncus etruscus (white-toothed pygmy shrew): 126013845
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Entry
126013845 CDS
T09902
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
setr05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126013845 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
126013845 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126013845 (TAF4)
03036 Chromosome and associated proteins [BR:
setr03036
]
126013845 (TAF4)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126013845 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
126013845 (TAF4)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
126013845 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
126013845
NCBI-ProteinID:
XP_049633000
LinkDB
All DBs
Position
7:complement(8959103..8985256)
Genome browser
AA seq
1117 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAAAHPHPAARAPEPAAAAAAAAGPNPG
ANPNALANHVGAAVTTAQGAPAAAPEPPPAGKEPGPDRRGPAGGRPPGPRPHAHAASRLV
PAGPAAKLSALDAAAATGTATPTPTTAAPAAASSCSSSSSSEPAAASKPAAVSVSVPVPV
SVSVSVPAAAAASSAHTLNGSAVLVNSHRTAAVVAAPAASLLLHNGPAPPKPTPAAAAPA
CTATVIQTPPFAAPPAPRAPSPPAPNANAAPPAPSNAAQAAPPPPPKPPAAASLARPPGH
PAVAAAAAAASAAQQNGGPAAVTVTAAVTVTAPAPVPAPAPAPVPAAPAAAAAATVVVNS
QPGPAAAPPAQGAKAESPKTVPVAPPQTLAAGAGPSMLLGPATAAAPAAPGLPQQPAPPG
TPTGLPKGPACTVTPSLSRTPPAATAAAAAAAAGGIRATLTPTVLAPRLPQPPQNPTNIQ
NFQLPPGMVLVRSENGQLLMIPQQALAQMQAHAQAQPQTPMAPRPATPTSAPPVQISTVQ
APGTPIIARQVTPTTIIKQVSQAPTTTVQPTAALQRSPGVQPQLVLGGAAQTTALATASA
VQTGTPQRAVPGATTTSAAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQN
LLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPASQ
ATTALTAVVLSSPVQRTAGKTAATVTSALQPPVISLTQPTQVGIGQGSQPSPSVIQQPPK
PGTLLRPPQVTLTQTPMVALRQPHNRIVLTTPQHIQLNQLQPVPVVKPAVLPGTKALSTV
SAQAAAVQKNRLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCK
DETFLLPAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKVSETAQQKNFSY
KDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGPGTEGSGPGSAVPGSSGVGTPR
QFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggacctgctggacgaggtgttcttcaacagcgaggtggacgagaag
gtggtgagcgacctggtgggctcgctcgagtcgcagctggccgccgcgcacccgcacccc
gcggcccgcgcgcccgagcccgccgccgccgccgccgccgccgccggccccaaccccggc
gccaaccccaacgcgctcgccaaccatgtcggggccgccgtgacgacggcccagggcgcg
cccgccgccgccccggagccgccccccgcaggtaaagagcccgggcccgatcgccgcggg
cccgccggcgggcgccctccgggcccgcgtcctcacgctcacgccgcctctcggcttgtc
cccgcagggcccgccgcgaagctcagcgccctcgacgccgccgccgccacgggcaccgcg
acgccgacgccgacgaccgcagcgcccgccgcggcctcctcctgctcctcctcctcctcc
tccgagcccgcagccgcgtccaaacccgccgccgtctccgtctccgtccccgtccccgtc
tccgtctccgtctccgtccccgccgccgccgccgcctcctcggcgcacacgctgaacggc
agcgccgtgctggtgaactcgcaccgcaccgccgccgtggtcgccgcacctgccgccagc
ctgctgctgcacaacgggcccgcgccgcccaagcccacccccgccgccgccgccccggcc
tgcaccgccactgtcatccagacgccgcccttcgcggcgccccccgcgccccgcgcaccc
tcgccccccgcgcccaacgccaacgccgcgccccccgcgcccagcaacgccgcccaagcc
gccccgccgccgccgcccaagccgcccgccgccgccagcttggcccggccgcccggccac
cccgccgtagccgccgccgcagcagcagcctccgcggcgcagcagaacggcggccccgcc
gctgtcactgtcaccgccgctgtcactgtcaccgccccggccccggttccggctccggct
ccggctcccgtcccggccgcacccgccgccgccgcggccgccaccgttgttgtcaacagt
cagcccggcccggccgccgccccgcccgcgcagggcgccaaggcggagtcgcccaagacc
gtgccggtggcgcccccgcagaccctcgccgcgggagccgggcccagcatgctcctagga
cccgccacggcggccgcccccgccgccccaggcctcccgcagcagcccgcgccgcccggc
acccccaccgggctgcccaaaggccccgcctgcaccgtgacccccagcctgtcccggacg
cccccggctgccaccgccgccgctgctgccgcggccgccggcgggatccgggccacgctc
acgcccaccgtcctcgccccgcgcctgccgcagccgccgcagaaccccaccaacatccag
aactttcagctgccgcccggtatggtcctcgtgcgaagtgagaatgggcagctgctaatg
atccctcagcaggcgttggcccagatgcaggcccatgctcaggcccagccgcagaccccc
atggcaccccgccctgcgacccctaccagtgctccccctgtgcagatctccacggtgcag
gcacctgggacccccatcatcgctcgtcaggtgacccccactaccatcatcaagcaagtg
tctcaggctccgacgacgacggtgcagcccactgcagcactgcagcgctcccccggtgtg
cagcctcagctggtcctgggtggcgcggctcagaccacagcactggccacggcatcagct
gttcagacggggacccctcagcgagcagtgccaggggccaccaccacctctgcggctgcc
acagaaacaatggagaatgtgaagaaatgcaagaacttcctctcgacgctgatcaagctg
gcctcgtcgggcaaacagtctacagagacggccgccaatgtgaaggagcttgtccagaac
ttactggacgggaagatcgaagctgaggatttcacgagtaggttataccgggaacttaat
tcttcacctcaaccttaccttgtgccttttctgaagaggagcttgcccgccttgagacag
ctgacgcccgactccgcagccttcatccagcagagccagcagcagccacctgcctcgcag
gccaccacagcactcacggccgtggtgctgagcagcccagtccagcgcacggctgggaag
acggcggccaccgtgaccagtgccctgcagccgcccgtcattagcctcacgcagcccaca
caggttggcattggccagggttctcagccttccccctccgtgatccaacagccgcccaag
ccagggacgctgctccggcccccacaggtgaccttgacgcagacgcccatggttgcgctc
aggcagcctcacaaccgcattgtgctcaccacaccccagcatatccaactgaaccagctg
cagccagtccctgtggtgaaacctgctgtgctgcctggaaccaaagctctatccactgtc
tcggcacaggcagcagccgtgcagaagaacagactcaaggaacctggtggaggctctttc
cgggatgatgacgacatcaacgacgtggcatccatggcgggggtgaacctgtcggaggag
agtgcccggatcttggccaccaactcggagctggtgggcactctgacgcgctcgtgcaag
gacgagacgttcctgctgccggcaccactgcagagacgcatcttggagatcggtaagaag
cacggcatcacggagctgcaccctgacgtggtcagctacgtgtcacatgccacacagcag
cgactccagaacctcgtggagaaggtctcagagacggcacagcagaagaacttctcctac
aaggatgatgaccggtacgagcaggccagtgacgtccgggctcagctcaagttctttgaa
cagctcgaccagattgagaagcagagaaaggatgagcaggaacgggagattctgatgcgg
gcggccaagtctcgatccagacaagaagatccagagcagttacggttgaaacagaaagcc
aaggaaatgcagcaacaggagctggcacagatgcggcaacgcgatgccaacctcacagca
ctggcagccattgggcctaggaagaagaggaaagtggattccccgggcccaggcccgggc
acagagggctcgggccccggctccgcagtcccaggcagctccggtgttggaacccccagg
caatttacgcgacagcggatcacgcgggtcaacctcagggacctcatattttgtttagaa
aacgagcgagagacaagccattcgctgctgctctacaaagctttcctcaagtag
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integrated database retrieval system
