Suncus etruscus (white-toothed pygmy shrew): 126013867
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Entry
126013867 CDS
T09902
Symbol
NCSTN
Name
(RefSeq) LOW QUALITY PROTEIN: nicastrin
KO
K06171
nicastrin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04330
Notch signaling pathway
setr05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126013867 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126013867 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
126013867
NCBI-ProteinID:
XP_049633028
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Position
7:complement(61932270..61939068)
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AA seq
710 aa
AA seq
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MAAVGGGPGGPRLLPLLCLGALLAGLCGGNSVERKIYVTLNRTAPCVRLLNATHQIGCQS
SLSGDTGVIHVVEKEDDLQWVLSSGPNPPYMVLLEGTLFTRSLMEKLKGSSRIAGLAVSL
ARPLPAAGYSSSVQCPNEGFGIYSDTYGPEFAHCRNLLWNPHGDGLAYEDFNFPIFLLED
ENETETIKECYRKHNLGQNGSAPTFPLCAMQLSAHMHAVLSTATCMRRSALQTSFSINPE
IVCDPLSDYNVWSLLRATNTTVPLSPAQKLVLAVTRLDSRSFFWNVAPGAESAVASFVTQ
LAAAEALQKAPDIPSLPRNVMFIFFQGETFRLHRQFQMVYDMETGRFPVGLDNIHTFVEL
GQVALRSNLELWMHTDPLSQINESVRKQVEALLATVEKSSQGLPVMVQRPPQTQPLPPSS
LQRFLRARNLSGVVLADHQAAFRNRYYQSVYDIPESINISYPQGQSPEENLNYVTETAKA
LADVATLLARALYHLAGGDQPTASIQGRPPKRXDCRPVPPRCLYGFLVKPNNSWFQSFVR
QDLRPFLGDGTPQHYIAVSSPTNTTYLVQHALANLTGTALGLTREQCLDPSQVPSENKDL
YDYTWVQGPLNDNHTERLPHCVRSTVRLVRALSPAFDLDQWGSTEYSTWTESRWKDIHAR
IFLVASRELELITLTVGLGILVLSLVITYCINAKASVLFMAPHEPGAVSY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtggggggcggtcccgggggtccccgcctcctgcccctactgtgcctcggc
gccctgctggcaggtctgtgtgggggcaactcggtggagaggaagatctacgtgaccctt
aaccggacagcaccctgtgtccgcctgctcaatgccacgcaccagatcggctgccagtca
tcactcagtggggacacgggggtcatccacgtggtggagaaggaggatgatctgcagtgg
gtgctcagcagcgggccgaaccccccatacatggtgctactggaaggcactctcttcacc
aggagcctcatggagaagctgaagggcagcagccgcattgctggcctggcagtgtccctg
gcccgacccctccctgccgctggctattcctcaagtgtgcagtgccccaacgagggcttt
ggcatctattcggacacttatgggccagagtttgctcactgccgaaacctactgtggaac
ccccatggcgatgggctagcctatgaggacttcaacttccccatcttcctgctggaggat
gagaatgagacggagaccatcaaggagtgctaccgcaaacacaaccttggccagaatggc
tctgcacccaccttcccgctgtgtgccatgcagctatcagctcacatgcacgccgtgctc
agcaccgctacctgcatgcgccgcagcgccctacagacgtccttcagcatcaacccagag
attgtctgcgaccctttgtctgactacaacgtgtggagcctactgcgggccaccaatacc
actgtgcccctgagccctgctcaaaagctggttctggctgtcacccggctggacagccgt
tccttcttctggaatgtggccccgggagctgagagtgctgtggcctccttcgtcacccaa
ctggccgcagcagaagctctccaaaaggctccagatatcccctccctgccccggaatgtc
atgttcatcttcttccagggggagacatttcgactacatcggcagttccagatggtttat
gacatggagacaggaaggttccctgtgggtctggacaacattcacaccttcgtggagctg
ggtcaggtggctctcaggagcaatctcgagctctggatgcacacagaccccttgtctcag
ataaatgagtccgtgcggaagcaggtggaggccctgctggccacggtagagaagagcagc
cagggcctgcctgtgatggtgcagcggccaccacagacccagcccctgccgccatcctcg
ctgcagcgcttcctccgtgcccggaacctgtcgggggtggtccttgctgatcatcaggcc
gccttccggaaccgctactaccagagtgtgtacgacattcctgagagcatcaacatcagc
tacccacagggccagagcccagaggagaatctcaactatgtgacagaaacagccaaggcc
ctggcagatgtggccacactgttggcacgagccttgtaccatctggcagggggtgaccag
cccacagcgtccatccagggccgacccccaaaacggtaagactgtcgccctgttcctccc
cgctgtctgtacggcttcctggtgaaacccaacaactcctggttccagtcctttgtgcgg
caggatctgcgccctttcctgggggacgggaccccacagcattacatcgccgtctctagt
cccaccaacaccacctacctggtgcagcatgccctggccaacctgacaggcaccgcgctg
ggcctgacccgggagcagtgcctggaccccagccaggtgcccagcgagaacaaggatctg
tatgactacacgtgggtgcagggacctctgaatgacaaccacaccgagcggctaccccac
tgtgtccgctccactgtgcgcctggtcagggcactgtctcctgcctttgacctggaccag
tggggttccactgagtactccacgtggactgagagccgctggaaggacatccatgcccgc
atcttccttgtggcgagcagggagctggagctcatcaccctgaccgtgggcctgggcatc
ctcgtgctctcactggtcatcacctactgcatcaacgccaaggccagtgtcctcttcatg
gctccccatgagcctggtgctgtgtcctactga
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