Suncus etruscus (white-toothed pygmy shrew): 126013938
Help
Entry
126013938 CDS
T09902
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05202
Transcriptional misregulation in cancer
setr05206
MicroRNAs in cancer
setr05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126013938 (ZEB1)
05206 MicroRNAs in cancer
126013938 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
126013938 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126013938 (ZEB1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
126013938 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
126013938
NCBI-ProteinID:
XP_049633116
LinkDB
All DBs
Position
7:34646429..34800484
Genome browser
AA seq
1100 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESIADAADCEGVPEDD
LPTDQTVLPGSSEREGNAKNCWEEDVKDDECDSDAENEQNHDPNVEEFLQQQDTAVIYPE
APEDDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNFS
CSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLRI
HSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRTGLKTSQCSSPSLSASPG
SPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGPL
QATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQANLASKEQ
ETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPVPAN
SCKSEKLPEDLTIKSEKDKSFEGEANDSTCLLCDDCPGDINALPELKHYGLKQPTQTPPL
PAPETEKPETSVPSSSGDGNMSPTQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLP
LDVVKKWFEKMQAGQISVQSSEPSSPEPGKVNISVKSDEKPQSTNANDSQDSTIQSPLKM
SNSPVLPVGSAVNGSISSTSPPSPLNLSSSRNTQGYLFTAEGAQEEPQVEPLDLSLPKQQ
GELMERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKENCVTDSEPVVNVIPPSANPINIA
IPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSTTVSPGVQEQQPSLKVI
QPNGSQDERQDTSSEGVSNVEDQNDSDCTPPKKKMRKTENGMYACDLCDKIFQKSSSLLR
HKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNH
RYSYCKREAEERDSTEQEEAGPEVLPSEHVGAMASPSQGDSDERESLTREEDEESEKEEE
EEEDKEMEDLQEEKECEQPQGEEEEEEEMEEEAEETENEKGVKTEGLMKDDGAVGNQASS
LEQKVSENSEQVSEEKTNEA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaattcagactcagacgatgaagacaaactccac
attgtagaagaagaaagtattgcagatgcagcagattgtgaaggtgtgccagaagatgac
ctgccaacagaccagacagtattaccagggagcagtgaaagagaaggaaatgctaagaac
tgctgggaggaggatgtaaaagatgatgaatgcgactcagatgctgaaaatgaacaaaac
catgatcctaacgttgaagaattcctgcaacaacaagacactgctgtcatttaccccgaa
gcgcccgaagatgaccagagacagggcacaccagaagccagtggtcatgatgaaaatgga
acaccagatgcattttcccagttactcacctgcccatattgtgatagaggctataaacgt
ttcacctctctaaaagaacacattaagtaccgccatgaaaagaatgaagataactttagt
tgctccttgtgcagctatacttttgcatacagaacccaacttgaacgtcacatgacatca
cataaatcaggaagagatcagagacatgtgacgcagtctggaggtaatcgtaaattcaag
tgcactgaatgtggaaaagcttttaaatacaaacaccatctaaaagagcacttaagaatc
cacagtggagagaagccatatgaatgccccaactgcaagaaacgattttcccattctggt
tcctatagttcacacataagtagtaagaaatgtatcagcttgatgcctgtgaatgggcga
ccaagaacaggactcaagacatctcagtgttcctcaccgtctctctctgcatcaccaggc
agtcccactcgaccacagatacggcaaaagatagagaataaaccccttcaagaacaactt
tctgtaaaccaaattaaaactgaacctgtggattatgaattcaaacccatagtggttgct
tcaggaatcaattgttcaacccctttacaaaatggggtctttagtggtggtggcccattg
caggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggtttg
gtatctcccataagtatcaatttaagtgatattcagaatgtactgaaagtggcagtagat
ggtaatgtgataaggcaagttttggagaataatcaagccaatcttgcatccaaagaacaa
gaaacaatcaatgcttcatccatacagcaaggtggccattctgttatttcggccatcagt
cttccgttggttgatcaggatggaacaaccaaaattatcattaattacagccttgagcag
cctagccaacttcaggtggttcctcaaaatttaaaaaaggaaaatccagttcctgcaaac
agttgcaaaagtgaaaaattaccagaagatcttactattaaatctgagaaggacaaaagc
tttgaaggagaagcaaatgatagcacttgccttctgtgtgatgattgtccaggagatatt
aatgcacttccagaattaaagcactatggcctaaagcagcctacccagacccctccactc
cctgcccctgagactgagaagcctgaaacttctgtgccatccagttctggagatggaaat
atgtctcccactcagccacctttaaagaacctcttgtctcttctaaaagcatactatgct
ttgaatgcacagccaagtgcagaagagctttcaaaaattgctgattcagtaaacctgcca
ctggatgtagtaaaaaagtggtttgaaaagatgcaggctgggcagatttctgtgcagtct
tctgagccatcttctccagaaccaggcaaagtaaatatctcagtaaagagcgatgagaag
cctcaatccacaaacgccaatgactcccaggacagcacaatacaaagtcctctgaagatg
agtaactccccggttttaccagtgggatcggccgtcaatggttccataagcagtacatca
cctccatcacctctgaacctttcctcctccagaaatacacagggttacttgttcacagca
gaaggtgcacaggaagagccacaagtagaacctcttgatctttcactaccaaagcaacag
ggagagttaatggaaaggtcaacgatcactagtgtttaccagaacagtgtttattctgtc
caggaagagcccttgaacttgtcttgtgcaaaaaaggagccacaaaaggaaaattgtgtt
acagactcagaaccagttgtaaatgtaatcccaccaagtgccaaccccataaatattgct
atacctacagtcactgcccagttacccaccattgtggccattgctgaccagaacagtgtt
ccatgcttgcgagcactcgctgccaataagcagactatcctgattccccaggtggcttac
acatactctactacagttagccctggagtccaggaacaacagccgtccctgaaagtgatc
cagccaaatggaagtcaggatgaacggcaggacactagctcagaaggagtatcaaatgta
gaggatcaaaatgattctgattgtaccccacccaaaaagaaaatgcggaagacagaaaat
ggaatgtatgcttgtgatttatgtgataagatattccaaaagagtagttcgttattgaga
cataaatatgaacacacaggtaaaagacctcacgagtgtggaatctgtaagaaggctttt
aaacacaaacatcatttgatcgaacacatgagattacattctggagaaaagccctatcaa
tgtgacaaatgtggaaagcgtttctcacactctgggtcttactctcaacacatgaatcat
cgctactcgtattgcaagagagaagctgaagaacgtgatagtacagagcaggaagaggca
ggaccagaagtcctccccagtgagcatgttggtgctatggcgtctccctctcagggcgac
tcagacgagagagagagtttgacaagagaagaagatgaagagagcgaaaaagaggaagaa
gaggaggaggataaagagatggaagacctgcaggaagaaaaagaatgtgagcaaccacaa
ggggaagaggaggaggaggaagagatggaggaagaggcagaggagacagagaatgaaaaa
ggagtcaaaactgaaggtctaatgaaggatgatggggctgttgggaatcaagcaagcagc
ttagaacaaaaagtaagcgaaaatagtgagcaagtgtctgaagaaaaaacaaatgaagct
taa
DBGET
integrated database retrieval system
