KEGG   Suncus etruscus (white-toothed pygmy shrew): 126013943
Entry
126013943         CDS       T09902                                 
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
  KO
K05719  integrin beta 1
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03271  Virion - Rotavirus
setr04015  Rap1 signaling pathway
setr04145  Phagosome
setr04151  PI3K-Akt signaling pathway
setr04360  Axon guidance
setr04510  Focal adhesion
setr04512  ECM-receptor interaction
setr04514  Cell adhesion molecules
setr04530  Tight junction
setr04611  Platelet activation
setr04670  Leukocyte transendothelial migration
setr04810  Regulation of actin cytoskeleton
setr04820  Cytoskeleton in muscle cells
setr05100  Bacterial invasion of epithelial cells
setr05133  Pertussis
setr05135  Yersinia infection
setr05140  Leishmaniasis
setr05145  Toxoplasmosis
setr05165  Human papillomavirus infection
setr05200  Pathways in cancer
setr05205  Proteoglycans in cancer
setr05222  Small cell lung cancer
setr05410  Hypertrophic cardiomyopathy
setr05412  Arrhythmogenic right ventricular cardiomyopathy
setr05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    126013943 (ITGB1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    126013943 (ITGB1)
   04151 PI3K-Akt signaling pathway
    126013943 (ITGB1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    126013943 (ITGB1)
   04514 Cell adhesion molecules
    126013943 (ITGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    126013943 (ITGB1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    126013943 (ITGB1)
   04530 Tight junction
    126013943 (ITGB1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    126013943 (ITGB1)
   04810 Regulation of actin cytoskeleton
    126013943 (ITGB1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    126013943 (ITGB1)
   04670 Leukocyte transendothelial migration
    126013943 (ITGB1)
  09158 Development and regeneration
   04360 Axon guidance
    126013943 (ITGB1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126013943 (ITGB1)
   05205 Proteoglycans in cancer
    126013943 (ITGB1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    126013943 (ITGB1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    126013943 (ITGB1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    126013943 (ITGB1)
   05133 Pertussis
    126013943 (ITGB1)
   05100 Bacterial invasion of epithelial cells
    126013943 (ITGB1)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    126013943 (ITGB1)
   05140 Leishmaniasis
    126013943 (ITGB1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    126013943 (ITGB1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    126013943 (ITGB1)
   05414 Dilated cardiomyopathy
    126013943 (ITGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:setr04131]
    126013943 (ITGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:setr04147]
    126013943 (ITGB1)
   04515 Cell adhesion molecules [BR:setr04515]
    126013943 (ITGB1)
   04090 CD molecules [BR:setr04090]
    126013943 (ITGB1)
Membrane trafficking [BR:setr04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    126013943 (ITGB1)
Exosome [BR:setr04147]
 Exosomal proteins
  Proteins found in most exosomes
   126013943 (ITGB1)
Cell adhesion molecules [BR:setr04515]
 Integrins
  Integrin beta subunits
   126013943 (ITGB1)
CD molecules [BR:setr04090]
 Proteins
  126013943 (ITGB1)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 126013943
NCBI-ProteinID: XP_049633123
LinkDB
Position
7:complement(36035448..36085367)
AA seq 798 aa
MNLQLIIWIGLCSSICCVFGQTDENKCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
SARCDDLEALKKKGCHPNDIENPRGSKKIKKNKNVTNRSKGTAEKLLPEDITQIQPQQLV
LQLRSGEPQTFKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNDLVGKQR
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
CHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIQLIIDAYNSLSSEVILENSKLPEGVKISYKSFCKNGVNGTEENGRKCSNISI
GDEVQFEINITSEKCPSRNPETIKIKPLGFTEEVEIILHFICNCECEKEGIPHSPKCHEG
NGTFECGACRCDEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTTTCL
ASNGQICNGRGICECGTCKCTDPKFQGSTCELCQTCIGVCVEHKDCVQCRVFNKGEKKDT
CEQDCSHFNITIVDSRDKLPQPGQFSQMSHCKEKDIDDCWFYFTYSVHGHKESMVYVVET
PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPKYEGK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaatttgcaactgatcatctggattggcctgtgcagttcaatttgctgtgtttttggc
caaacagatgaaaataaatgtttaaaagcaaatgccaaatcttgtggagagtgtatacaa
gcagggccaaattgtggatggtgcacaaactcaacatttttacaagaaggaatgcctacg
tctgcacgatgtgatgatttagaagctttaaaaaagaagggttgccatccaaatgacata
gaaaaccccaggggctcaaaaaagatcaagaaaaataaaaatgtgaccaaccggagcaaa
ggaacagcagagaaactccttccggaagacatcactcagatacagccacagcagttggtc
ctgcagctgcgatcaggggagcctcagacattcaaattaaaattcaagagagctgaagac
tatccaattgatctctactacttgatggacctctcttactctatgaaagatgatttggag
aacgtgaaaagtcttggaacagacctgatgaatgaaatgaggaggattacttcagacttt
cgcattgggtttggctcatttgtggagaaaactgtgatgccttatattagtacaacacca
gctaaactcaggaatccctgcacaagtgaacagaactgcaccagtcccttcagctataaa
aatgtgcttagtcttactgacaaaggagaagtattcaatgaccttgttggtaaacagcgc
atatctggaaatttggattctccggaaggtggctttgatgccattatgcaagttgcggtt
tgtggatcattgattggctggaggaatgttacccggctgctggtgttctccacggatgct
ggatttcactttgctggagatggaaaacttggtggcattgtcttaccaaacgacgggcag
tgccatctggagaataatgtgtacacgatgagtcattattatgattacccttcaattgct
caccttgtccaaaagcttagtgaaaataacattcagacgatttttgcagttactgaggaa
tttcagcctgtttataaggaattgaaaaatttgatccctaaatcagcagtaggaacatta
tctgcaaattctagcaatgtaattcagttgatcattgatgcatacaattctctttcctca
gaagtcattctggagaacagcaagttgccagaaggagtgaaaataagttacaaatctttc
tgcaaaaatggtgtgaatggaacagaggaaaatggaagaaaatgctccaatatttccatt
ggagatgaggttcaatttgaaataaacataacttcagaaaaatgcccaagtaggaatcct
gaaacaattaaaattaaacctctgggcttcaccgaagaggtagagatcattcttcacttc
atctgtaattgtgaatgtgaaaaggaaggaattcctcatagtcccaagtgtcatgaagga
aatgggacttttgagtgtggagcttgcaggtgtgacgagggacgtgttggtaggcattgt
gaatgtagcacagatgaagttaacagtgaagacatggatgcatactgcaggaaagaaaac
agctcagaaatctgtagtaacaacggagagtgcgtctgtggacagtgtgtttgtaggaag
agggataatacaaatgaaatttattctggaaaattctgcgagtgtgataatttcaactgt
gatagatctaatggcttgatttgtggagggaatggtgtttgcaagtgccgtgtatgtgaa
tgcaaccccaactacactggcagtgcgtgtgactgttctttggataccactacatgcctg
gcctcaaatggacagatctgcaatggccgcggcatctgtgagtgtggtacctgtaagtgc
acagatccaaagttccaaggttcgacttgcgagttgtgtcagacttgcattggtgtctgt
gttgagcataaagattgtgtccagtgcagagtcttcaataagggagaaaagaaagacacg
tgtgaacaagattgttcgcatttcaacattaccatagttgacagtcgggacaaattgccc
caacctgggcagtttagccaaatgtcccattgtaaggagaaggatatcgatgattgctgg
ttctatttcacatactcagtgcacgggcacaaggagagcatggtttacgttgtagaaacc
ccagaatgtcccactggaccagacatcataccaattgtagctggtgttgtggctggaatt
gttcttattggccttgcattgcttttaatttggaagcttttgatgataattcatgacaga
agggaatttgccaaatttgaaaaggaaaaaatgaatgccaaatgggatacgggtgaaaat
cctatttataagagtgccgtgacaactgtcgtcaatccgaaatatgagggaaaataa

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