Suncus etruscus (white-toothed pygmy shrew): 126013975
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Entry
126013975 CDS
T09902
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126013975 (TMF1)
Membrane trafficking [BR:
setr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126013975 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
NPH-II
Motif
Other DBs
NCBI-GeneID:
126013975
NCBI-ProteinID:
XP_049633200
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Position
7:104243467..104291354
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AA seq
1093 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQDEEPSAWADTIPFGEPGISPSVTGGWDTL
TWGLKSSKEPQSQPVDTPQAITKPVRRTVVDESENFFSAFLSSTDVQPIQKSPVVSKPPA
KSQRPEEEVKSSLQESLHEEESKTTETTESTVQDFSCVSGEETPAVDALPSKNDNNYEEM
VNKESDMKVPTVNLKVSESVINVKGTKEDASSMPMQTLTTETKDITLEPKEQKHEDRQSN
TPSPPVSTFSSGTSTTSDIEVLDHESVISESSASSRQETTDSKSSLHLMQTSFQLLSASA
CPEYNRLDDFQKLTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELPGKGYALAPIMV
NSSTPKTKVVESVEGKSEQVNESLSIPAEETEMEESGRSATPVNCEQPDILVPSTPINEE
QTLLDKVTEQSEVAENQLEVFSEKEDICKKVEYLNEKLDKREAQLLSLSKEKALLEEAYD
NLKDEMFRMKEESSSISSLKDEFTQRIAEAEKKVQLACKERDVAKKEVKNIKEELATRLN
SSETADLMKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDKENENVITKLNKKVKEL
EEELQHLRQVLDGKEEVEKQHRENIKKLNSLVERQEKDLGRLQVDMDELEEKNRSIQAAL
DNAYKELTDLHKANAAKDSEAQEAALSREMKAKEQLSAALEKAQEEARLQQETLAIQVRD
LRLALQRAEQTAARKEDYLRHEISELQQRLQEAENRNQELSQNVSSTTRPLLRQIENLQA
TLGSQTSSWEKLEKNLSDRLGESQSLLAAAVERERAATEELLANKTQMSSMESQNSLLRQ
ENSRFQAQLESEKNRLRKMEDENNRYQVELENLKDEYVRTLEETRKEKTLLNSQLEMEKM
KVEQERKKAIFTQEALKEKERKPFSVSSTPTLSRSSSISGVDMAGLQTSFLSQDEAQDHS
VGSMSLSANGNNLYDAVRMGAGSSVIENLQSQLKLREGEITHLQLEISNLEKTRSIMAEE
LVKLTNQNDELEEKVREIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMY
KTQIDELLRQRLS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctctccagcttcgccaagcaggccctgtcccaggcc
cagaagtccatcgacagggtcctggacatccaggacgaggagccgagcgcctgggccgac
accatcccgttcggagagccgggaataagcccctctgtcactggaggatgggacactttg
acttggggattaaaatcaagcaaagaacctcaaagtcaaccagtagatactcctcaagca
attacaaagccagttcggagaactgtggtagatgaatctgaaaatttcttcagtgccttt
ctttcttcaacggatgtccagcccattcaaaagagtccagtagtgtcaaaaccgccagct
aaatcacagcgtccagaggaagaagtgaaaagttccttacaggaatccctgcatgaagaa
gaatcgaaaacaaccgaaacaactgagtcgacagtacaagatttttcatgtgtatcaggg
gaagaaactccggcagtagatgctctgccctctaaaaatgacaataactatgaagaaatg
gttaataaagaatccgatatgaaagtgccaacagtaaatttgaaagtgtctgaaagtgta
attaatgtgaaaggaactaaggaagatgcatccagtatgcctatgcaaactctcaccact
gaaaccaaggacataactctggaacctaaagaacagaaacatgaagacagacaaagcaac
acaccttctcctcctgttagtactttttcatcaggcacttctaccaccagtgatattgaa
gtgttagatcatgaaagtgtcataagtgagagctcagcaagttctagacaggaaaccaca
gattcaaaatcaagccttcacttgatgcagacatcttttcagcttctctcagcatctgct
tgtccggaatataatcgtttagatgatttccagaaactcactgaaagttgctgctcgtcg
gatgcttttgaaagaatagactcgtttagtgtacagtcattagatagccgtagcgtaagt
gaaatcaattcagatgatgaattgccaggcaagggatatgctttagcacctatcatggtt
aattcttcaactccaaagactaaagtagttgaatctgttgaaggaaaatctgagcaagta
aatgaatccttaagtatacccgctgaggaaacagaaatggaagaaagtggacgaagtgca
acccccgttaactgtgaacagcctgatatcttggttccttcgacaccaataaatgaagaa
caaactttgttagacaaggtgactgagcagagtgaagttgccgaaaatcagttagaagta
ttttctgagaaggaagatatttgcaagaaagttgaatatctgaatgaaaaactagataaa
agggaagctcagttactatcgcttagtaaagaaaaggctcttctagaggaagcttatgat
aatctgaaagatgaaatgttcagaatgaaagaagaaagcagcagcatttcttccttgaaa
gatgaatttactcaaagaattgcagaagcagaaaagaaagttcagctagcttgcaaagaa
agagatgttgctaaaaaggaagtaaaaaatataaaagaagaacttgctactagattaaat
agtagtgaaaccgcagacctgatgaaagagaaagatgagcagatccgagggctaatggaa
gaaggagaaaaactttcaaaacagcagttgcataattctaacatcattaagaagttaaga
gctaaagacaaagaaaatgaaaatgttattacaaagctgaacaaaaaagttaaagagcta
gaagaagaattgcaacatttaagacaggttctggatggcaaagaagaagttgagaaacaa
catagagaaaatattaaaaaactaaattccctggtcgaacgccaagaaaaggatcttggt
cgacttcaggtagatatggatgaacttgaagaaaagaaccgaagtattcaggctgctctt
gataatgcttacaaagaactgactgatctccacaaagctaatgctgccaaagatagcgaa
gcacaggaagctgctctgagtcgtgaaatgaaagctaaagagcaactttctgcagcacta
gaaaaggctcaagaagaagcccgcctgcagcaagaaacattggccattcaggtgagagac
cttagactggcactacaacgtgcagaacaaacagcagccagaaaagaggattacctacgt
catgagatcagtgaacttcagcagagactacaagaagcagagaatcgaaaccaggaactg
agtcaaaatgtttcatcaacaacaagaccactgcttcgccaaatagaaaatttacaagca
actctaggctcccagacttcatcgtgggagaagttagaaaagaatctttctgataggctt
ggtgaatctcagtctttgttggcagcagcagtggaaagagaacgtgcagctacagaagaa
cttcttgccaacaaaactcagatgtcttccatggagtcacagaattctctcttaagacag
gaaaacagtagatttcaggcccaactagaatccgagaaaaatagactaagaaaaatggag
gatgaaaataataggtatcaggttgaattagaaaatctaaaagatgaatatgtaaggaca
cttgaagagacaaggaaagaaaagacactgctgaatagtcaattagaaatggagaaaatg
aaagttgaacaagaaagaaaaaaagcaatttttactcaagaggctttgaaagaaaaggaa
cggaaaccattttctgtttctagcactcccacactttcacgctcaagttcaataagtgga
gtagatatggcggggctacaaacatcttttctatctcaggatgaggctcaagatcactca
gttggatcaatgtctttatcagcaaatggaaacaatctctacgatgctgtaaggatgggg
gcaggatcaagcgttattgaaaatctacagtctcagctaaagctcagggaaggagaaatt
actcatttgcagctagagataagcaatttagaaaaaactcgttcaataatggctgaagag
ctagttaaattaacaaaccaaaatgatgaacttgaagaaaaagtgagggaaatacccaaa
cttcgaactcagctaagagatttggatcaaaggtacaacactattctgcagatgtatgga
gaaaaagcagaagaagcagaagaacttcggttagatcttgaagatgtgaaaaatatgtat
aagactcaaatagatgaacttttgagacaaaggctcagctaa
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