Suncus etruscus (white-toothed pygmy shrew): 126014022
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Entry
126014022 CDS
T09902
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126014022 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126014022 (USP4)
Enzymes [BR:
setr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126014022 (USP4)
Peptidases and inhibitors [BR:
setr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126014022 (USP4)
Ubiquitin system [BR:
setr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126014022 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
126014022
NCBI-ProteinID:
XP_049633288
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All DBs
Position
7:complement(122270285..122325363)
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AA seq
959 aa
AA seq
DB search
MAEGGGCRERPDAETQKSELGALMQTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVG
EHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRK
VVEHGLFVKHCKVEVYLLELKLCENSDPTNLLSCHFSKADTLATIEKEMRKLFNIPAERE
TRLWNKYMSNTYEPLSKLDNTVQDAGLYQGQVLVIELQNEDGTWPRQTMQPKSSPAPSRN
FTTSPKPSASPYSSVSASPIANGDSTNTSGMHSSGVSRGFSASYSCQEPQSSQVQPGICG
LGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMW
SGRDSHVIPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDA
NGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECSKVSVTFDPFCYLTLPLPL
KKDRVIEVFLVTADPRCRPTQYRLVVPLMGAVSDLCEALSRLSGIAVENMVVADVYNHRF
HKIFQMDEGLNHILPRDDIFVYEVYSTSTDGTEYVTLPVYFRERKSNPPSTSSGVVLYGQ
PVMVSVPKHKLTLEALYQAVCERISRYIKQPLPDESGSSPLEPGSCNGSRGSCEGEDEEM
EHQEEGKEQLSETEGSGEEELGNNHSETTQKSRGQRCPRRLFTFSLVNSYGTADINSLAT
DGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYEKHVSMLQSQKKKKTAVALRECIELF
TTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFP
IRGLNMSEFVCDRSARPYVYDLVAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDNNVSLA
SEDQIVTKAAYVLFYQRRDDEFYKTPSHMNFPGSSDGGMRPSSSQQGFGEDEACSMDTN
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcggaggctgccgagagcggcccgatgccgagacccagaagtccgagctg
ggggccttgatgcagaccacgctgcagcggggagcgcagtggtatcttattgacagtcgg
tggttcaagcagtggaagaaatacgtgggctttgacagctgggatatgtacaacgtggga
gaacacaacctatttcctggccccatagacaactccgggctcttttcagatccagagagt
cagaccttgaaagaacatctaatcgatgaattggattatgtattggtcccaactgaggcc
tggaataagttattaaattggtatggctgcgtagaaggacagcagcccatcgtgagaaaa
gttgtggagcatggcctgtttgtcaaacactgcaaagtggaagtgtacttgctcgaactg
aagctctgtgagaatagcgaccccaccaatcttctgagttgccatttcagcaaagctgat
actcttgcaaccattgagaaggagatgcggaagctgttcaatattcctgcagagcgtgag
acacgactgtggaacaagtacatgagcaacacctacgagccgttgagcaagttagacaac
actgttcaggatgcggggctttaccagggccaggtgctagtcatcgagcttcagaatgaa
gatggcacatggccgaggcagaccatgcagccaaaatcaagccctgcacctagcagaaat
ttcactacctctccaaaaccgtctgcgagtccctattcctcagtgtctgcctctcccatt
gccaatggcgacagcactaacacctctgggatgcacagttccggtgtcagcaggggcttc
tccgcttcatatagttgccaggagccccagtcgtctcaagtacagcctgggatctgtgga
cttggaaacctgggaaacacctgcttcatgaactctgctttgcagtgcttgagcaacaca
gcgccactgactgattactttctcaaggacgagtatgaagccgaaatcaacagagacaac
ccgttgggcatgaaaggggaaattgcagaggcttatgcagagcttattaagcagatgtgg
tctggaagggattctcacgtgatcccgagaatgttcaaaacacaagtgggacgttttgca
cctcagttttctggctatcagcaacaagactctcaggagctgttagcctttcttctggat
ggcttgcatgaagatctaaaccgagtgaagaagaaaccctacctagaactgaaggatgcc
aacgggcggccagatgcggtggtagcaaaggaagcctgggagaaccacagattgaggaat
gactctgtgattgtggacaccttccatggcctcttcaaatctactctggtttgcccagaa
tgttcgaaggtgtcagtgacctttgaccctttttgctatctaactctcccattgcccttg
aagaaagatcgagttatagaggtcttcctggttactgctgatcctcgctgcagacctact
cagtaccgcctggtggtgccgctgatgggtgctgtgtccgatctctgcgaggcgctctcc
aggctgtctggcatcgctgtagaaaatatggtggtcgccgatgtgtataaccatcgattt
cacaaaattttccaaatggatgaaggtttaaaccacatcttgcctcgggatgacatcttt
gtgtacgaagtctacagcacctccactgatggcaccgagtatgtgacgcttccagtctat
ttcagggaaagaaagtcaaaccctccgagcacctcttctggagtggtactttatggacag
ccagtgatggtttctgtccccaagcataagctaaccctcgaggctttgtaccaggctgtc
tgtgagcgtatcagccgctatataaaacaacctttgcctgatgaatctggcagctcgccc
ttggagcccgggtcctgcaatggctccaggggcagctgtgaaggagaagatgaagaaatg
gagcatcaggaagaaggtaaagagcagctctcagaaaccgaaggaagtggcgaggaggaa
ctgggaaacaaccacagtgagaccacccagaagagccgaggccagcgctgtcctaggagg
ctttttaccttcagcctggtcaactcctatggaacagccgacattaattcactggccaca
gatggaaaactacttaaactcaactctcgatccacgttggccattgattgggatagtgag
acccggagcttgtactatgatgaacaggagtctgaggcctatgagaagcacgtgagcatg
ttgcagtcgcagaagaagaagaagacagcagtggccctcagagagtgcatcgagctcttc
accactatggagacccttggggaacacgacccctggtactgtcccaactgtaagaaacat
cagcaggccacaaaaaagtttgacctgtggtctttgcccaagatactggtggtccacctg
aaacgtttctcctacaacagatactggagagacaagcttgacactgttgtggaattccca
atcagaggtctgaacatgtccgagttcgtctgtgaccggtcagcaaggccatatgtgtat
gatctcgttgctgtatccaatcattatggagccatgggggttggccactacactgcttat
gcgaagaacaaactgaatgggaaatggtactattttgatgacaacaacgtgtccttggcc
tctgaggatcagatagtgacaaaagctgcttacgtgctgttttaccagcgtcgagatgat
gaattttataagacaccttcacacatgaattttcctggatcttcggatggaggaatgagg
cccagtagctcacagcagggctttggggaggacgaggcgtgcagcatggataccaactga
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integrated database retrieval system
