Suncus etruscus (white-toothed pygmy shrew): 126014056
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Entry
126014056 CDS
T09902
Symbol
TRAIP
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126014056 (TRAIP)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126014056 (TRAIP)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126014056 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
Crescentin
HIP1_clath_bdg
zf-ANAPC11
zf-C3HC4_3
zf-RING_Vps41
zf-RING_11
GAS
zf_RING_Vps8
zf-RING-like
Zn_ribbon_8
CCDC93_CC
zf-RING_16
MscS_porin
zf-UDP
RINGv
ACR_tran
APG6_N
WEMBL
Motif
Other DBs
NCBI-GeneID:
126014056
NCBI-ProteinID:
XP_049633327
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All DBs
Position
7:complement(122779329..122807802)
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AA seq
470 aa
AA seq
DB search
MPIRALCTICSDFFDHTRDVAAIHCGHTFHLQCLFQWFESAPSRTCPQCRIQVGKRAIIN
KLFFNVAQEEETVLDAEFLKNELDNTRAQLAQKEKEKKDNQAIIDALRDTLEERNATVES
LQKALDKSEMLCSALKKQMKFLEQHQDETKQAREEARQLRNKMKTMERIELLLQSQRPEV
EKMIQDMGVGQSATEQLAVYCVSLKKEYENLKESRKTSRELTDKLKKDLFSSKSKLQTVN
CELNQVRLELKSAQKDLQSADKEITSLKKKLTVLQETLNLSPVDRESVNRLVLESPVPLG
MLKLRQPIFSDEIDLNATFDIETPPARSSDNHFGLAKKLCLEKASSSVENVSKKISSDPL
QESPLAQDNQCCQEEPDEDEELANAFPLYIRNVVRARKKPSKDRSEPSRSTDRIRTGFDG
LGGRTRFTQTGDIRFIRSRPPLIRPKAKAKSRGKAKTMLPPSQAKLDMYL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccgtgctctctgcaccatctgctctgactttttcgaccacacccgcgacgtg
gccgccatccattgcggccacaccttccacttgcagtgcctctttcagtggtttgaatca
gcgccaagtcggacttgccctcagtgcagaatccaggttggcaaaagagctattatcaac
aaactcttctttaacgttgcccaggaggaggagactgtcttagatgcagagttcttaaag
aatgaattggataataccagagcccagcttgcccaaaaagagaaagagaagaaagacaac
caggccatcattgatgctctgagggatactctggaagaacgcaatgccactgtggaatct
ctgcagaaggctttagacaaaagtgaaatgttatgctccgctctcaagaagcaaatgaag
ttcttagagcagcatcaggatgagaccaaacaagcacgtgaggaggcccggcaactcagg
aacaaaatgaagaccatggaacggattgagcttctactccagagccagcggcctgaggtg
gagaagatgatccaagacatgggagtagggcagtcggcgacagagcagctggctgtgtac
tgcgtgtccctgaagaaagagtatgaaaatcttaaagaatcacggaagacctcgagggag
ctaactgacaagctgaagaaagacttgttttcttctaaaagcaagttacagacagtcaac
tgcgaactcaaccaggtcaggttggaactaaagtcagcccagaaggacttacagagtgct
gacaaggaaatcacgagtctgaaaaaaaagctgacggtgctgcaggaaacactgaatctc
tcgccagtggatagagaatctgtcaaccgcctggttttggaaagtccggtcccactgggg
atgctgaagcttcgccagccaatcttcagtgatgaaattgacctcaatgctacctttgat
atagagacccccccggctcgttcgtctgacaaccactttggtcttgccaagaagctctgc
ttagagaaggcatcctcttcagttgagaacgtttccaagaagatatccagtgacccctta
caggagtccccactcgcccaggacaaccagtgctgccaggaagagccagatgaggacgag
gagctagcgaatgccttccctctctacatccgaaatgtagtccgggcccggaaaaagccc
tcgaaggaccgaagcgagccaagtcgcagcacagatagaatcaggacaggcttcgatgga
cttggaggccggacaagattcacccagactggtgacattcgtttcatccgatcacgtcca
ccactcataagacccaaggccaaggctaagtccagggggaaagcaaagaccatgctccct
ccctcccaggccaagctggacatgtacttgtga
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