KEGG   Suncus etruscus (white-toothed pygmy shrew): 126014140
Entry
126014140         CDS       T09902                                 
Symbol
TNNC1
Name
(RefSeq) troponin C, slow skeletal and cardiac muscles
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04020  Calcium signaling pathway
setr04260  Cardiac muscle contraction
setr04261  Adrenergic signaling in cardiomyocytes
setr04814  Motor proteins
setr04820  Cytoskeleton in muscle cells
setr05410  Hypertrophic cardiomyopathy
setr05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    126014140 (TNNC1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    126014140 (TNNC1)
   04820 Cytoskeleton in muscle cells
    126014140 (TNNC1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    126014140 (TNNC1)
   04261 Adrenergic signaling in cardiomyocytes
    126014140 (TNNC1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    126014140 (TNNC1)
   05414 Dilated cardiomyopathy
    126014140 (TNNC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:setr04812]
    126014140 (TNNC1)
Cytoskeleton proteins [BR:setr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     126014140 (TNNC1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EH SPARC_Ca_bdg DUF5580_M FCaBP_EF-hand DUF6694 EF_EFCAB10_C
Other DBs
NCBI-GeneID: 126014140
NCBI-ProteinID: XP_049633420
LinkDB
Position
7:complement(125209622..125212654)
AA seq 161 aa
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNSDGYIDLEELKMM
LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgacatctacaaagctgcggtagagcagttgacagaagagcagaaaaatgagttc
aaggctgcctttgacatctttgtgctgggcgctgaggatggctgcatcagcaccaaggaa
ttgggcaaggtgatgcggatgttgggccagaaccccaccccggaggagctgcaggagatg
atcgatgaagtggatgaggatggcagtggcacagtggactttgatgagttcctggtcatg
atggttcgttgcatgaaggatgacagcaagggcaagtcagaggaggagctgtctgacctc
ttccgcatgtttgacaagaactcagatggctacattgacctagaggagctgaagatgatg
cttcaggccactggggagaccatcacagaggacgatatagaggagctcatgaaagacggg
gacaagaacaatgatggccgcattgactatgatgagttcctggagttcatgaagggggtg
gagtaa

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