Suncus etruscus (white-toothed pygmy shrew): 126014141
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Entry
126014141 CDS
T09902
Symbol
STAB1
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126014141 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126014141 (STAB1)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Hyaluronan
Cell surface receptors
126014141 (STAB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_laminin
RIPR_EGF-like_7th
EGF_Teneurin
EGF_ATRAID_C
EGF
EGF_MSP1_1
EGF_TEN
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
126014141
NCBI-ProteinID:
XP_049633421
LinkDB
All DBs
Position
7:125263224..125297157
Genome browser
AA seq
2564 aa
AA seq
DB search
MPGSWGLSLCVLAFCLAGPSFVRSQKAQSKRCDVKTKLVTHTPCTACPAIKKRVCPPGWI
RQFPLKISQDCSYEVQLGDGLVTMSGCSMECWKDMVQKACCPGYWGSQCYDCPGGAKNPC
NGHGTCLDGLNRNGTCICQENFGGTACQECRDPNHFGPDCQSKCNCVHGVCNRGPLGDGS
CRCSAGYTGPHCDQVLPVCRDLNCPQNSECSAESPSCSCLPGYTQEKTECQALDPCWPSP
CSPLAKCSKSPQGQAQCRCPDNYHGDGKVCLPHDPCTVNYGGCPSDSTVCLYQKPGKSSC
ACKPGLLSIARNASAGCFASCSPHSCDRSATCKVTPEGKISCVCKEGEVGDGRACYGHLL
HEVQKTGQIGMVFLRLRLAYTMLEQGCQELLTNSGPFTVLVPTVYDPSKSVNASLARQLC
RQQVIAGQHLLEDPRTQNARRLWTLAGQQITIIFNRFLQKYTYTYSDQPQQTFTVQTTNL
PAANGVFHLVTPLRWQPPPTVLQDHKRTIGQILASTEAFSRFETILENCGLPSILDGAGP
FTVFVPSNEAVDSLRDGRLIYLFTAGLSKLQELVKFHISNQGQLTVDKIVSKGRILTVAN
QILMVNISEEGRILLGPEGVPLQKVDILAANGVIHMLDGVLLPPTILPILPKHCDEERHQ
IVEGSCVDCQALNTSTCPENSVKLDLMFKECVYIHDPTGLNVLKKGCAIHCNQTVQKPGC
CKGFFGPDCAQCPGGFSNPCYGKGNCNDGIQGNGACVCFPDFKGLACHICSNPNKHGEEC
QEDCGCIHGICDNRPGSGGVCQQGTCTSGFSGRFCNESTQSCGPSEQTQNCDPNARCVSQ
GGVDRCVCLDGFKGDGFSCTPHSPCSLPDRGGCSENAECVPGASGTHNCTCHKGWTGDGR
VCVAIDECELDARGGCHADALCSYVGPGQSRCTCKLGFAGDGYTCSPIDPCRAGNGGCHD
LATCRTVGGGQRVCTCPAGYGGDGLSCYGDIFRELEANAHFSVFYKWVKDAGITLPADGR
VTALVPSESAIRRLSSEDQAFWLQPRTLPQLVRAHFLQGALSEEDLAQLGGQKVATLSPT
IRWEIRNISGRVWVHNASVDVADLLATNGVLHILSQVLLPPREDVPARQGLLQQLNLVPA
FHLFGKLLQRHGLVSKIEAATAYTIFVPTNHSLEAYDNSSSLDADTVRHHVILGEALSTE
TLQRGGHRNSLLGPSHWLVFYNHSSQPEVNHVPLEGPVLESPGCSLYGLSGVLTVGSSRC
LQSHAEALREKCVNCSRKFRCTRGYQLENTPQKSCMFRSGYSFSRGCSYTCARKIKVPDC
CPGFFGVLCEPCPGGLGGVCSGHGQCQDRLLGNGECRCREGFHGTACEMCEVGRYGPNCT
GECRCAHGLCQEGLQGNGRCVCDVGWQGLRCDEKISSVQCPQCDANANCLQVSGADPVCV
CAAGYSGNGTFCSEVDPCAHNRGGCSPHANCTKVAPGQRTCTCQDGYSGDGELCQEVNNC
LNHNGGCHEHAACIPVGPQQVSCNCRDGYSGDGIKTCKLLDPCTQRNGGCSPYAMCKSTG
DGERTCTCNPAQTVGDGFTCRARVSLELLRDSQALFFSLHLLEYKELKGDGPFTIFVPHA
GVLANLSQDELTRIRAQRSLVFRYHVVGCRRLRSQDLLQEGYATALSGHSLRFSEREGSI
YINEYARVVNSDQEAVNGVLHFIDRVLLPPEALHWEPRTAPTPRRNVTAAAESFGYKIFS
GLVKKAGLLPMLRDGFHRPLTMLWPTDLALKALPPDRQAWLYHEDHRDKLAAILRGHVIR
NVEALASDLPNLGSLRTMHGTPISFSCSRARPGELLVGEDEARIVQRYLPFDGGLAYGID
QLLEPPGLGARCDRFETLLLRLDCSICGMEPPCPEGSQEQGSPETCLRFFSKFWSAPPLH
SQGMRSTWARPKFWDLGRGCHRNCVTTSWKPSCCSGHYGSSCRACPGGASRPCNKHGVCL
DGMSGSGQCKCLPGFEGTACELCAPGYFGPYCQACACTSHGTCDEGIGGSGSCFCLEGWT
GSRCEVQLKLQPVCTPPCAPQAVCRVGNSCECNLGYEGDGHQCTVANLCQDGNGGCSQHA
TCSQNGTAVTCTCLPDYEGDGWSCRGRDPCADGQRGGCSEHADCLSTGPNSRRCTCHAGY
VGDGLHCVGEPQPPVDRCLSQPRPCHSDAICTDLHFQEKRAGVFHLQAPSGPYGLNFSEA
EAACGAQGAALASLQQLSAAQQLGFHQCLVGWLANGSAAHPVVSPAPDCGNGQVGIVSLG
HRQNRSERWDAFCYRLTDVSCQCRGGFVGDGTSTCNGKLLDVLAATANFSTFYGMLLSYA
NATPRGLAFLDFLDLERPYKTLFVPINEGFKDNMTLSGPDLELHASNATFLSANASRATS
LPAHSGLSLVVGDAGANSSWAPAAPGTVVVNHVIVWDIMAFNGIIHALASPLLAPPQPRA
VVAPEAPPVAAGVGSVLAVGALLGLVAGAFYLRARGKTTGFGFSSFQVEEDAKDDFSPWQ
EGTSPTLVSVPNPVYGSHDAFGEPFDDSLLEDNFPDTQRILEVK
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcagttggggcctctcgctctgcgtcctcgccttctgcctggcaggccccagc
tttgtcaggagccagaaggcacagtccaagcgctgcgatgtgaagaccaagcttgtcacc
cacacaccctgtaccgcgtgtcctgccatcaagaagcgggtgtgtccgcctggttggatc
cgacagttcccactgaagatctcccaggattgcagctatgaagtgcaactgggggatggg
ctggtgaccatgagtggctgcagcatggagtgctggaaggacatggtacagaaggcctgc
tgccccggctactgggggtcccagtgctacgactgtcccgggggtgccaagaacccgtgc
aacggccatgggacctgcctggatgggctaaacaggaacggaacctgcatatgccaggaa
aacttcgggggaacagcctgccaagagtgccgggaccccaaccactttgggcctgactgc
cagtcaaaatgcaactgtgtgcatggagtatgcaaccgtgggccactgggggatggctcc
tgccgctgctctgctggctacactggaccccactgtgaccaagtgttacctgtgtgccgg
gacctgaactgcccccagaactcggagtgttctgccgagtccccctcctgcagctgcctg
cctggttatacccaggaaaagacagaatgccaagcccttgatccctgctggccatcaccc
tgctcccctctggccaagtgctccaagagcccgcaggggcaggcacagtgccgctgtcct
gacaactaccacggcgacgggaaagtgtgtctgccccatgacccctgcaccgtcaactat
ggtggctgccccagtgactccaccgtgtgcctgtaccagaagccgggcaagtcttcctgt
gcatgtaagcctggcttgctcagcattgcccggaacgcctctgccggctgcttcgcctcc
tgctccccgcacagctgtgaccgctcagccacctgcaaggtgacccctgaagggaagatc
agctgtgtgtgcaaggagggggaagtgggggacgggcgcgcctgctacgggcacctgctc
catgaagtccagaagaccggccagatcggcatggtgttcctgcggttgaggctcgcctac
accatgctggagcaaggctgccaggagctgctcaccaattccgggcccttcacggtgctc
gtgccgacggtctacgacccctccaagagcgtgaacgcctccctggcacgccagctctgc
cggcagcaagtcatcgcagggcagcacttgctggaggaccccaggacccagaacgcacgc
aggttgtggacactggcggggcagcagatcaccatcatcttcaaccgctttctgcaaaag
tacacgtacacgtatagtgaccagccgcagcagaccttcaccgtccagaccaccaacctc
cccgccgccaacggcgtctttcacctggtcacccctctgcggtggcagcccccacccaca
gtgctgcaggaccacaaaagaaccatcggccagatcctcgcttccacagaggccttcagc
agatttgagaccatcctggagaactgtggtctgccctccatcctggatggggccggcccc
ttcacagtcttcgtccccagcaacgaggccgtggacagcctgcgtgacggccgcctcatc
tacctcttcacagcaggtctgtccaagctgcaggagctggtgaagttccacatctccaac
cagggccagctgactgtggacaagatcgtctccaagggccggattctcaccgtggccaac
caaatcttgatggtgaacatttcagaggagggacgcatcctgctgggaccggagggggtc
ccgctgcagaaggtggacattctggccgccaacggtgtcatccacatgctggatggcgtg
ctgctgccacccaccatcctgcccatcctgcccaaacactgcgacgaggagcggcaccag
attgtggagggctcctgtgtggactgccaagccctaaacacgagcacgtgccccgaaaac
agtgtgaagctggacctcatgttcaaggagtgcgtctacatccatgatcccacagggctc
aacgtcctcaagaagggctgcgccatccactgcaaccagactgtgcagaaacccggctgc
tgcaaaggattctttgggcctgactgtgcacagtgtcctgggggcttctccaacccctgt
tatggtaaaggcaattgcaatgatgggatccagggcaatggggcctgcgtctgcttccca
gacttcaagggcctcgcctgccacatctgctccaatcccaacaagcacggcgaggaatgc
caggaagactgtggctgcatccacggaatctgtgacaaccgtcctggcagcgggggtgtg
tgccagcaaggaacgtgcacctctggtttcagtggtcgcttctgcaacgagtccacgcaa
agctgtggaccctcggagcagacccagaactgtgacccgaatgcccgctgcgtcagccag
gggggtgtggacaggtgtgtctgtctggatggttttaagggtgacggattctcctgtaca
cctcacagtccctgctccctcccggaccgtggcggctgctccgagaacgcggagtgtgtc
cctggggcctctggcacccacaactgcacctgtcacaaaggctggactggggatggccgg
gtctgcgtagccatcgatgagtgtgagctggacgcacggggcggctgccatgctgatgca
ctctgcagctatgtgggacctgggcagagccggtgcacctgcaagttgggctttgcaggg
gatggttacacctgcagccccatcgatccctgccgggctggtaacggtggctgccatgac
ttggctacctgccggacagtggggggcggccagagagtctgcacgtgccccgctggctat
ggcggtgatggtctcagctgctatggagacatcttccgggagctggaagcaaatgcccac
ttctctgtcttctacaaatgggtgaaggatgctggcatcactctccccgccgacggccgt
gtcaccgcactggtgccttctgagtctgccatccgtaggctgagctccgaggaccaggcc
ttctggctgcagcccagaacactgccacagctggtcagggcccattttctccagggtgcc
ctgtctgaggaggacttggcccagctgggtgggcagaaagtggctaccctgagccccacc
atccgctgggagatccgcaacattagcgggagggtctgggtgcacaatgccagtgtggac
gtggccgacctcctcgccaccaacggtgtcctgcacattctcagccaggtcctcttgcct
cccagagaagacgtaccagccaggcagggactgttgcagcagctgaacttggtgcctgcc
ttccacctctttggcaagctgctgcagcgccatggactggtgtccaagattgaagctgcc
actgcctataccatctttgtgcctaccaaccactcactggaagcctatgacaacagcagc
agtctggatgccgacaccgtgcgccaccatgtgattctgggcgaggcactatccacagag
acgctgcagaggggcggtcatcgcaactccctgctgggccccagccactggcttgtcttc
tacaaccacagtagccagccggaggtgaaccacgtacccctggaaggccctgtgctggag
tcccctggctgctccctctatggcctttcgggagttctaacagtgggttcaagtcgttgt
ctccaaagccacgcggaggccctgagggagaaatgtgtcaactgctcgcggaagttccgc
tgcactcggggctaccagctggagaacaccccccagaagagctgcatgttccggtctggc
tactccttctcccggggctgctcgtacacctgtgcccggaagatcaaggtgcccgactgc
tgtcccggcttcttcggggtgctgtgtgagccatgccctgggggcctcggaggcgtgtgc
tcaggccatgggcagtgccaggacaggctcctgggcaacggggagtgccgctgccgcgag
ggcttccacgggacagcctgtgagatgtgcgaggtgggtcgctacgggcccaactgcacc
ggagagtgtcgctgtgcccatgggctgtgccaggagggactacaagggaacgggagatgt
gtctgtgacgtgggctggcagggtctccgctgtgacgagaagatcagcagcgttcagtgc
ccacagtgcgatgccaacgccaactgcctccaggtctcaggggcagaccccgtgtgtgtc
tgtgctgcgggttattccggcaatggcaccttctgctcagaggtggacccctgtgcccac
aatcgcgggggctgctctccccatgccaactgcaccaaggtggcacccggacagcggaca
tgtacctgccaggatggctactcgggtgatggggagctgtgtcaggaagttaacaactgt
cttaaccacaatgggggctgccatgaacacgcagcctgcatccccgtcggcccccagcag
gtctcctgcaactgtcgcgatggatacagtggggacggcatcaagacctgcaagctcctg
gacccctgcacccagcggaatgggggctgcagcccctacgccatgtgcaagagcacggga
gatggcgagaggacctgcacctgcaacccagcccaaactgttggggatggtttcacctgc
cgtgcccgagtcagcctggagctcctgcgagacagccaagccttgttcttcagtcttcac
ctcttggaatacaaggagctcaagggagatgggcccttcacgatctttgtgccccacgca
ggtgtcctggccaacctgtcacaggacgagctgacccgcattcgggctcagcgctccctc
gtgttccgctaccacgtggtgggctgccggaggctccgcagccaggacctgctgcaggag
ggctacgccacggcgctctcgggccactcgctgcgcttcagcgaacgggagggcagcatt
tacatcaatgagtacgcccgtgtggtgaacagtgaccaggaggccgtgaacggtgtcctg
cacttcatcgaccgtgtcctgctgccacccgaagccctgcactgggagcccaggacagcg
cccaccccgaggagaaatgtcactgctgctgcggagagctttgggtacaagatcttcagc
ggccttgtgaagaaagccggcctcctgcccatgctgcgtgatggtttccataggcccctg
accatgctgtggcccacagacttggccctgaaggcactgccgccagatcggcaggcctgg
ctgtaccacgaggaccaccgtgacaagctggcagccatcctgcggggtcatgtgatccgc
aacgtcgaggctttggcatctgacctgcccaacctgggttccctccggaccatgcacggg
acccccatctccttctcctgcagtcgagctcggccgggtgagctcctggtgggagaggat
gaagcccgcattgtgcagaggtacctgcccttcgacggtggcctggcctatggcatcgac
caactgctggaaccccctggccttggtgcccgctgtgaccgctttgagactctgctgctg
cgattggactgcagtatctgcgggatggagccaccatgtcctgagggttcccaggagcag
ggcagccccgagacctgcttgcgcttcttctccaagttctggtcagcgccgccactccac
tcacagggcatgcgcagtacttgggcccgacccaagttctgggacctgggaaggggttgc
catcgcaattgtgtcaccaccagctggaagcccagctgttgctccggccactatggcagc
agttgtcgagcttgcccaggtggtgccagcaggccctgtaacaaacatggtgtgtgtctg
gatggcatgagtggcagcgggcagtgcaagtgccttccaggatttgagggcacagcgtgt
gaactctgtgccccggggtactttggaccctattgccaagcctgtgcctgcacctcccac
ggcacctgtgatgagggcattgggggctctggctcctgcttctgcctcgagggctggaca
gggtctcgctgtgaggtacagctgaagttgcagcctgtatgcaccccaccctgcgcaccc
caggctgtgtgtcgtgtgggcaactcctgcgagtgcaacctgggttacgaaggggatggc
caccagtgcacagtggcgaatctgtgccaggacgggaatggtggttgcagccagcatgcc
acctgcagccagaacggaacggctgtcacctgcacctgcctgcctgactatgagggtgat
ggctggagctgccgaggcagagacccctgcgccgatgggcagcgagggggctgcagcgag
catgccgactgcttgagcactggcccgaactcacggcgctgtacgtgccacgctggctat
gtgggcgatgggctgcattgtgtgggggaaccccagccgcctgtggaccgctgcctgagc
caaccccgcccgtgccattcagacgccatctgcacggacctgcactttcaggagaagcgg
gccggcgtcttccacctgcaggctcccagcggcccctacggcctcaacttctccgaggcc
gaggcggcctgcggcgcccagggagcggccctggcttccctccagcagctgtccgcggcc
cagcagctgggcttccaccagtgcctggtgggctggctggccaacggctcggcggcccac
cccgtggtgtctcccgcgcccgactgcggcaacggccaggtgggcatcgtcagcctgggg
caccggcagaaccgctcggagcgctgggacgccttctgctaccgcctgacagacgtgtcc
tgccagtgccgaggcggcttcgtgggcgacggcaccagcacgtgcaacgggaagctgctc
gacgtgctggccgccaccgccaacttctccaccttctacgggatgctgctgagctacgcc
aacgccacccccaggggcctggccttcctggacttcctggacctcgagcgcccctacaag
acgctcttcgtgcccatcaacgaaggcttcaaggacaacatgacgctgagcggccccgac
ctggagctgcacgcctccaacgccaccttcctcagtgccaacgccagccgggccacctcg
ctccctgcccactcgggcctcagcctcgtggtcggggacgcgggcgccaacagctcctgg
gcccctgcggccccagggacggtggtggtcaaccacgtcatcgtgtgggacatcatggcc
ttcaatggcatcatccacgcgctggccagccccctcctggcgcccccacaacctcgggct
gtggtggcacctgaggccccacccgtggcagcaggcgtcgggtctgtgctagctgtcggg
gccctgctgggcctcgtggctggagccttctacctccgggcccgaggcaagaccacgggg
tttggcttctcctcgttccaggtggaagaagacgccaaggatgacttctccccgtggcag
gaggggaccagccccaccctggtctcggtccccaaccctgtgtacggcagccacgatgct
tttggggagccctttgatgactcacttctagaggacaacttcccggacacccagaggatc
ctcgaggtcaagtga
DBGET
integrated database retrieval system
