Suncus etruscus (white-toothed pygmy shrew): 126014237
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Entry
126014237 CDS
T09902
Symbol
DMXL2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126014237 (DMXL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126014237 (DMXL2)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126014237 (DMXL2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
126014237 (DMXL2)
RAVE complex
126014237 (DMXL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_HPS5
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
126014237
NCBI-ProteinID:
XP_049633512
LinkDB
All DBs
Position
1:complement(548910..748126)
Genome browser
AA seq
3028 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVGDAPFTAYGSGCDIVILASDFECVQIIPGAKHGNIQV
SCVECSHQHGRIAASYGNAVCIFEPLGINSHKRNCCQWLKSGQFFLSSVTYNLAWDPQDN
RLLTATDSIQLWAPPGGDVLEEEEEIDSKVPPVLNDWKCIWQCKTSVSVQLMEWSPDGEY
FATAGKDDCLLKVWYPMTGWKSSIIPQDHHEVKMKRRHAATQFSFVYLAHPRAVTGFSWR
KTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSIAGNLTHHGKH
KDRIQHALETIHHLKNLRKGQRRSSVLVTHTDFMADQGAMHEVQRHISHHANALCHFHIA
ASINPATDIPNVLIGTVFNTDDGNGGFVVHWLNNKEFHFTSSTEIFMQQLRKLSEKQVDL
ESNDATREDEERSQEERERGLRMKLDHDLSLDRESEAGTGSSEHEDGEGSPRTCSRPSAS
LPLPTVLLDRKIEMLLAEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQVSFS
SRIPVAFPSGDASSLSKNIMMYACINALKDSHHIQSHVELVAADSPHGSQPQSRSHCTNM
NIVAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHSVLP
LLLTSSHHNALLTPESDSQWDSDIKLRKLMDPIRHVKGPSKQALRNAATCTFHDPNAIYS
ELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACFV
ASDGTNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITNQC
GSNTQLLHVFQEDFIIGYKPHKEDKEKKESEIFFQPKQGYRPPPFSEKFFLVVIEKDSNN
DSILHMWHLHLKSVQACVAKASEGASSENLLSVPGQKTVDSSPETSPVVSSMPHSLSIAN
LQTASKLILSSRLVYSQPLDLPEGVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCSDNK
VRFWKCSMETNPQCRSDEKETYHWKQWPLMNDEGEDNSSTVSIVGRPVAVSCSYTGRLAV
AYKQPIQHNGFVSKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVLDSRVSVDSN
LFVYSKTDALLSKDRYLSSNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGIVTEQ
TNSKDGVAVITLPLCGSIKQGVRSRWFLLRSIDLVSSIDGTPSLPASLSWVRDGILVVGM
DCEMHVYAQWKHAVKFGDIEADSPDIEEIGIHDYSTFKANLLSRKSIVEGTAVTDDVFCS
PTIIQDGGLFEAAHILSPTLPQYHPTQLLELMDLGRVRRAKAILSHLVKCIAGEVAIVRD
PDAGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLYALLAADQDTTYR
VSEESTKIPQSFEDHTKRAPEDQYSELFQIQDITTDDIDLEPEKRENKSKVINLSQYGPS
YFGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDESRDKSCSGRDTLDE
CGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINRIPAIQRGD
PQWSELRAMGIGWWVRNINTLRRCMEKVAKASFQRNNDALDAALFYLSMKKKAVVWGLFR
SQHDEKMTTFFSHNFNEDRWRKAALKNAFALLGKQRFEQSAAFFLLAGSLKDAIEVCLEK
MEDIQLAMVIARLYESEFETSSTYISILNEKILGCAKDGSGFDCRKLHADPFLRSLAYWV
MKDYTRALDTLLEQTPKEEHEHQVIIKACNPVVFSFYNYLRTHPLIIRRNLVTPEGTLAT
LGLKTEKNYVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVNKTSALPEKKDQP
DSIGKKSGDVLSESNTLSDGGTSAGTDWSTVTSSQFDWSQPVIKVEEEPLNLDWGEEHDS
ALEEEEEDATSLVKNEERQGDEKTSDPKMSQTPQDEDSLEDDTEVDVIAEQLKFRACLKI
LMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHESVIKEYVNKVYSNAESEFL
DQEEMVDKPDIGSYERHQIERRRLQAKREHAEKRKLWLQKNQDLLRVFLSYCSLHGAQGG
GLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHI
HDILYTIVQMKTPPHPTVRDVKVQILHSLAASLSASIYQALCDSHSYSSLTEGNQFTGMA
YQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSSLINLLSSAQDEDQPKLNILLCEAVV
AVYLSLLIHALATNSSSELFRLAAHPLNTRMWAAVFGGGVKLVVKPQKQSENISAPPAPS
EDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVAKPFLPLS
DSGVIYDSDESIHSDEDEDDAFFSDTQIQEHQDPNSYSWALLHLTMIKLALHNVKNFFPI
AGLEFSELPVTSPLGIAVIKNMENWEQILQDKMDQFEGPPPNYINTYPTDLSVGAGPAIL
RNKAMFEPENTPFKSRDSSALPVKRLWHFLVKQEVLQETFIRYIFTKKRKQSEVEADLGY
PGGKAKIIHKESDMIMAFSVNKANGNEIVLASTHDVQELDVTSLLACQSYIWIGEEYDKE
SKSSDDVDYRGSTTTLYQPMATPHSAAQVHPPSSVPWLGTGQTSTGASVLMKRNLHNIKR
MTSHPIHQYYLTGAQDGSVRMFEWSRPQQLVCFRQAGNARVTRLYFNSQGNKCGVADGEG
FMSIWQVNQTSSNPKPYMSWQCHSKAASDFAFITSSSLVATSGQSNDNRNVCLWDTLISP
GNSLIHGFTCHDHGATVLQYAPKHQLLISGGRKGWVCLFDIRQRQLMHTFHAHDSAIKAL
ALDPCEEYFTTGSAEGNIKVWRLSGHGLIHSFKNEHAKQSIFRNLGAGVMQIDITQGNRI
FSCGADGTLKTRVLPNAFNFPTRILDIL
NT seq
9087 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgcaccaggtcctcacgggggccgtcaaccccggcgacaactgctactccgtg
ggcagcgtcggggacgcgcccttcacggcatatggatcaggctgtgatatcgttattttg
gccagtgactttgaatgtgtacaaattattcctggtgctaagcatggaaacatccaagtg
agctgcgtggagtgttcacaccaacatggaaggatcgcagcttcatatggtaatgctgtt
tgtatttttgaacccttgggcattaattctcataagagaaactgttgtcaatggctcaaa
tctggacagttttttttgagttccgtgacatacaatttagcatgggaccctcaagacaat
agattgttgacagcaactgattctattcagttgtgggctcccccaggaggtgatgttctg
gaagaggaggaagaaatcgatagtaaagtccctcctgttttaaatgactggaagtgcatc
tggcagtgcaaaacttcagtatctgtacagttgatggaatggtcccctgatggtgaatat
tttgctactgctggaaaggatgattgtcttttgaaagtgtggtaccctatgactggttgg
aagtcttccatcataccccaggatcaccatgaagtaaaaatgaaaaggcgtcacgctgct
acccagttctcctttgtttacttggcacatcccagagctgtgacaggcttttcatggcgc
aaaactagcaagtatatgcccagaggttctgtctgtaatgtgttgttgacttcatgccat
gatggtgtctgtcggctctgggcagaaaccttattaccggaagattgtcttttaggtgag
cagatttgtgagaccaccacttccagcattgctggcaaccttactcatcatggaaaacac
aaagacagaatacagcatgctcttgagacaatacaccatttgaaaaacttgagaaaaggt
caaaggaggtcttctgttcttgtaactcacactgacttcatggctgaccagggggcaatg
catgaagtccagagacacatttcccaccatgcaaatgctctgtgccacttccacatcgct
gcaagcatcaaccctgccacagatattccgaatgtcctgattggcactgtgtttaacact
gatgatggaaacggcggctttgtagtccattggttaaacaataaggaattccattttaca
tcatcaactgagatatttatgcagcagttacggaaactttctgaaaagcaagttgatctt
gaaagtaatgatgcaactagagaagatgaagaacggtcacaagaggaaagagagcggggt
ttacgtatgaagctcgaccatgatttgtccctggatagagaatctgaggcaggtactggg
tcatcagaacatgaagatggagagggcagtcccagaacctgctcacgacccagtgcttct
ctaccactccccactgtcctgcttgatcggaagatcgaaatgctactagctgaatggaat
aagaatcctgacatgctttttactatacacccagtagatggtaccttcctagtatggcat
gtaaaatatttggatgaatataatcctgggatatttagacaagtccaggtttctttttct
tcccggatacctgttgcatttccatctggcgatgcaagttctcttagtaaaaatatcatg
atgtacgcctgcataaatgccttgaaagactctcaccacattcagtcacatgtagagttg
gtggctgcagacagtcctcatggatcacagccacagtctcgatctcattgcacaaatatg
aacattgtagctcccacagtaatgatggtctctaaacacatagacggctctctgaaccag
tgggctgtcacttttgctgataaatctgcctttaccactgttctaactgtatctcacaaa
tttagatactgtggtcatcgatttcaccttaatgacctggcatgccattcagttttacca
ctgttacttacttcatctcatcataatgctctgttgactcctgaatctgatagtcagtgg
gactcagacattaaactacgtaaattgatggatcctataagacatgtaaaaggcccctcc
aagcaggcccttagaaatgccgcaacatgtacatttcatgatccaaatgcaatttacagt
gaacttattctatggcgtgtagacccaattggacctttatcatacactggaggagtatca
gaattggctagaattaattctttacatacttcagccttctctaatgttgcttggcttcca
actcttattcccagttattgtcttggcacatattgtaattctgccagtgcttgctttgtt
gcttctgatggcacaaatctgagactctatcaggctgtggtagatgcaaggaaattattg
gatgagctttcagaccccgaatcttcaaaactcattggagaagtgtttaatattgtgagc
caacagtctactgcccgacctggatgcattattgaacttgatgcaataaccaaccaatgt
ggttcaaatacacagttgcttcatgtgtttcaagaagactttattataggatataaacca
cataaggaagataaggaaaaaaaggaatcagaaatattttttcaaccaaaacaaggatat
cgtccaccaccattttcggaaaagttctttctagttgtaattgaaaaggatagcaataat
gactcgattcttcatatgtggcatcttcatcttaaatctgtccaggcatgtgtagctaaa
gcttcagaaggtgcttcgtctgaaaatctcctttcagtccctggacagaaaactgttgac
tcttctccagaaacttctcctgttgtgagctccatgccccattctttatcaattgctaac
cttcagactgctagtaaacttattctgagttccagattggtctatagtcaacctcttgat
cttccagaaggagtcgaagtaataagagcaacaccttcagcagggcacctgagttcttcc
tccatctatccagtgtgccttgcaccttacttggtggttacaacttgttctgacaataaa
gtccgcttctggaaatgtagtatggaaaccaacccacaatgtagaagtgatgagaaggag
acttatcattggaagcaatggcccttgatgaatgacgaaggagaggataatagcagtact
gtgagcattgtggggagaccagttgctgtgagctgttcatacacaggtcgccttgcagtg
gcttacaaacaacctattcagcacaatggttttgtctctaaggaattttccatgcatgtt
tgcatatttgaatgtgaatctacaggagggtcagagtgggttttagaacaaacaattcac
cttgatgacttggtcaaagttgggagtgtacttgactcaagggtcagtgttgatagcaat
ctgtttgtgtacagcaaaacagatgcacttttgagcaaggataggtacctatcttcaaat
ataaagcatttagtccatctggactgggtatccaaagaagatggttcccacattctcaca
gttggggtaggtgctaatatcttcatgtatggacggctttcaggcatagtgactgaacag
accaacagtaaggatggagtagccgtcattactttaccactgtgtggtagcatcaagcaa
ggagttagatcaagatggttccttcttaggtctattgatttagtgtcttcgattgatggt
acaccttcattgcctgcttctctttcttgggtgagagacgggatattggtggttggaatg
gactgtgaaatgcatgtgtatgcccagtggaagcatgcagtcaagtttggagacattgag
gctgacagtcctgatatagaagagataggaatccatgattattctacctttaaggcgaat
ctgttatcaaggaaaagtattgtcgaaggaacagctgttactgatgatgttttttgttca
ccaacaataattcaagatggtggcttatttgaagcagcacacattctttcccccacactc
ccacagtatcacccaactcagctgttggaattgatggatttagggcgagttagaagggca
aaagccatcctctctcatttagtaaaatgtattgcaggggaagttgccatagttagagat
cctgatgctggagaaggaactaaacggcatctttcccgaaccatcagtgtaagtggcagt
acagcaaaggacacagtcaccataggaaaagatggtacccgagattatactgagatcgac
tccatccctcctctcccactgtatgccttgcttgctgcggatcaagatacaacctaccgg
gtttcagaagaaagtacaaaaatcccccagagctttgaagatcataccaaaagagcacca
gaggatcagtactcagaactgttccaaatccaggatataacaacagatgatatcgactta
gagccagaaaagagagaaaataaatcaaaagtaatcaatctttctcaatatggaccatct
tattttggccaggaacatgctagggtcctttcaagtcatcttatgcattcaagcctccct
ggccttactcgtttggagcagatgtttctcgtagccttggcagatactgtagcgacaacc
agtaccgaacttgatgaaagcagagataagagctgctcagggagagacactctagatgag
tgtggcctcagatatttgcttgctatgcgcctacacacatgccttttgacatcactacct
cctttataccgagtgcagctacttcatcaaggtgtgtctacttgtcattttgcttgggcc
tttcattccgaagctgaggaagaactgattaataggattccagcaattcagagaggggac
ccacagtggtctgagttaagagctatgggaataggttggtgggtcaggaatattaatacg
cttcgacgatgcatggaaaaggtggccaaagcttcttttcaaaggaacaatgatgcctta
gatgctgcattattctacctttctatgaagaagaaagcagtagtgtggggtctgtttagg
tcacaacatgacgaaaaaatgacaacatttttcagtcacaactttaatgaagatcgatgg
cggaaagctgctttgaaaaatgcttttgctttacttggaaagcagcggtttgaacagtct
gctgcttttttcctgttagcaggatcactgaaagatgccatagaggtatgtcttgaaaaa
atggaagatattcaactggctatggttattgctcgtttatatgaatctgaatttgagact
tcgtccacttacatatcaattttaaatgagaagattttgggttgtgcaaaggatggctcg
ggatttgattgcagaaaattacatgctgaccctttcctgcgtagccttgcttactgggta
atgaaagattacacccgagccttggataccttattggaacaaacgccaaaggaagagcat
gagcatcaagttatcatcaaagcttgtaacccagtggtgttcagcttctacaattacctt
cgaactcatcccctcattattcgccggaaccttgtcactcctgaaggcacactggcaacc
ttaggcctcaaaacggagaaaaactatgtggataaaattaacctcatagaaagaaaattg
ttctttaccactgcaaatgctcactttaaggttggatgccctgttttagccttagaggtc
ctatctaaaattcccaaagttaacaaaacatctgccttacctgaaaaaaaagatcagcct
gactccattggtaaaaagagtggtgatgtactttcagaatcaaacactctcagtgacggt
ggcacaagtgctggcactgattggtcaactgtaacttcatcacaatttgactggagtcag
cctgttataaaagttgaggaagaacctcttaatcttgactggggtgaagaacatgatagt
gccttagaagaagaggaagaagatgccactagtttagtcaaaaatgaagagaggcaagga
gatgagaaaacctcagaccctaagatgtcacagacacctcaggatgaggactcgctggaa
gatgacactgaagttgatgtaattgctgaacaactaaaattcagagcttgtttaaagatc
cttatgactgaactaaggacactagccactggttatgaagtagacggagggaaactccga
tttcaactctacaactggcttgagaaggaaattgcggccttacatgagatatgtaatcat
gagtccgtgattaaagaatatgtgaataaagtgtattctaatgcagagagtgagttcctg
gaccaagaagaaatggtggacaagccagatattggttcctatgaacggcaccagatagaa
agacggagactgcaggccaaacgggagcatgcagagaagcgaaagctgtggctgcagaaa
aaccaagatcttttgcgagtgtttcttagttactgtagccttcatggggctcagggtggg
ggtctggcctctgtgagaatggaactcaaatttttgctacaagaatcacagcaggaaact
actgtgaagcagctccagtctccgctacctttgccgactaccctgcccctactttcagca
agtatagcctcaacaaaaacagtcatagcgaatcctgttctgtacctgaataaccacatc
catgatatactttatactattgttcagatgaaaacacctcctcatcccactgtcagagat
gtgaaggtgcaaatacttcattcgctggcagcatcactttctgcatcaatttaccaggca
ttatgtgacagtcatagctacagtagtctcacagaaggaaatcaatttacaggaatggct
tatcaaggtcttcttttaagtgatcgaagaagactgaggacagaaagcattgaagaacat
gcaacaccaaattcttctcctgcccaatggcctggtgtaagttcacttattaatcttttg
agttcagcccaagatgaagaccaaccaaaattgaacattctgttgtgtgaagctgttgtc
gctgtttacttaagtttgctgatacatgctcttgctacaaattcctccagtgaattgttt
cgacttgcagctcacccactaaatactcggatgtgggctgctgtttttggagggggtgtg
aaacttgtggtaaaacctcaaaaacaatcagaaaatatttcagcgcctcctgctccttct
gaagacatagataagcaccgccggagatttaatatgcggatgctggtccctggaaggcct
gtgaaagatgcaaccccaccaccagtgcctgcagagagaccatcttacaaagaaaaattt
attcctccagaactgagtatgtgggattactttgttgccaagccatttcttcctctgtct
gatagtggtgtcatatatgattctgatgaaagtattcatagtgatgaagatgaagatgat
gcctttttttcagatacacaaatacaggaacatcaagacccaaattcttacagctgggcc
cttctacatctgacaatgatcaagctagcacttcacaatgtcaagaacttctttcctatt
gctgggttggaattctcagagttgcctgtaacatcaccattgggtattgctgtgataaaa
aacatggagaattgggaacagatattgcaagacaaaatggatcaatttgaaggcccaccc
cctaactatatcaacacatacccaactgacctttcagtaggagctggaccagctatcctt
cgaaataaagcaatgtttgagcctgaaaacacgccattcaagtctcgggattcttctgct
cttccagtcaaacgactttggcattttcttgttaaacaagaagtccttcaagagacattt
attagatatattttcactaagaaaagaaagcagagtgaggttgaagctgatctgggatat
ccaggtggaaaagcaaagatcattcataaggagtctgacatgatcatggcattttctgtt
aataaggcaaatggtaatgaaattgttttggcttcgacacatgatgtgcaagaacttgat
gttacttctttgctggcctgccagtcatatatatggattggagaagaatatgataaagaa
tccaaaagctcagatgacgttgattatcgtggctccactacaactctttaccaacctatg
gcgacaccccattcagcagctcaggtgcatccgccttcatctgtgccatggctgggcact
ggacagaccagcactggagccagtgtgcttatgaagcggaatctacataatattaagaga
atgacctcacaccccatccatcagtactatctcacgggtgctcaggatggcagtgtacga
atgttcgaatggtcacgccctcagcaacttgtctgttttcgccaagccggaaatgcaaga
gtcaccagattatatttcaattcacaaggcaacaagtgtggtgttgcagatggagagggt
tttatgagtatatggcaagtaaaccaaacctcatcaaatcctaaaccttacatgagttgg
caatgccatagcaaagccgcaagtgacttcgcatttattacctcttcaagtctagttgcc
acatctggacagtccaatgacaacaggaacgtctgcctctgggacacactgatctctcct
ggaaacagccttattcatggcttcacgtgtcatgatcatggggccacggtgctccagtat
gcacccaaacaccagctgctcatatctggaggcaggaaaggctgggtctgcctgtttgac
atccgccagaggcagctgatgcacacgttccatgctcatgactcagccataaaggccttg
gccctggatccctgtgaggaatattttactacaggctcagcagaggggaacataaaggtt
tggagactatcaggccatggtctaattcattcgtttaaaaacgaacatgctaaacagtcc
atttttcgaaaccttggagctggagtcatgcagattgacatcacccaaggcaatcggatc
ttctcctgtggggctgatggaacactgaaaaccagagttctacccaatgcttttaacttc
ccaacaagaattcttgacatcctatag
DBGET
integrated database retrieval system
