Suncus etruscus (white-toothed pygmy shrew): 126014269
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Entry
126014269 CDS
T09902
Symbol
LAMC1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr04518
Integrin signaling
setr05020
Prion disease
setr05145
Toxoplasmosis
setr05146
Amoebiasis
setr05165
Human papillomavirus infection
setr05200
Pathways in cancer
setr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126014269 (LAMC1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126014269 (LAMC1)
04518 Integrin signaling
126014269 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126014269 (LAMC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126014269 (LAMC1)
09162 Cancer: specific types
05222 Small cell lung cancer
126014269 (LAMC1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126014269 (LAMC1)
09174 Infectious disease: parasitic
05146 Amoebiasis
126014269 (LAMC1)
05145 Toxoplasmosis
126014269 (LAMC1)
09164 Neurodegenerative disease
05020 Prion disease
126014269 (LAMC1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
126014269
NCBI-ProteinID:
XP_049633535
LinkDB
All DBs
Position
7:complement(53651391..53718434)
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AA seq
1818 aa
AA seq
DB search
MPGTPSYAPTAEAALPACTALSPGHHPSPPARAPQAPPRTPSAPPPGPARGAPFLSPTKQ
ATPHVEATPSPQPATPTRSPSPLFPQATPLPMETPPTNSSTTPPIRHSPPTHQAPPPPRP
PPRPEGRTRRARRAEGGRAGSLRLGGPEAAALLSESGAEAGRGRTLGASPRSFVPPRACG
RKPAGPARRARVLAFLPALPGGLRRRAAPVGRGAHDAGAGWGAGLAVAAAGGAGRGAARA
GRHGPSAWPRDGRPQRCMPXFVNAAFNVSVAATNTCGSPPEEYCVQGPGSRSRHKSCHLC
DAGQPPPGGTARLLTDYNNQADTTWWQSQTMLAGVXYPRPSTSRLHLGKAFDITYVRLKF
HTSRPESFAIYKRTREDGPWVPYQYYSGSCENTYGKANRGFIRTGGDEQQALCTDEFSDI
SPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFSDPKVLKS
YYYAISDFAVGGRCKCNGHASECVRDGRGQLVCDCKHNTYGPDCEKCLPFFNDRPWRRAT
AESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQGNTDGAKCERCRENFFRLGTH
EACAPCHCSAVGSLSTQCDSYGRCTCKPGVMGDKCDRCQPGYHSLTEAGCRPCVCNPSGS
IDECNVETGRCVCKDNVEGFNCERCKPGFFNLEPSNPRGCVPCFCFGHSSVCTNAVGYST
YSITSTFRLDDDGWHAEQRDGSDASLDWSAERQDVSVISDSYFPRYFIAPAKFLGQQVLS
YGQNFSFSFRVDRPDTRLSAEDVVLEGAGLRVSVPLIAQGNAYPSETTVKYIFRLHEATD
YPWRPPVTLFSEFQKLLNIXTAIKIRGTYSERSAGYLDDVTLASARPGPGVPANWVEMCT
CPAGYGGQFCETCLPGFRRETPSLGPYSPCVLCTCNGHSETCDAESGVCDCTDNTAGPHC
EKCADGYYGDATAGTTADCQPCPCPGGSSCAAVPKTGEVVCTNCPMGTTGKRCELCDDGY
FGDPLGQAGPVRLCRQCRCNGNIDPNAVGNCHRLSGECLKCIYNTAGFYCDRCRPGFYGD
PLAPNPADKCKACSCDPFGTAEQQGGCNAVTGQCECRPHVTGRDCGACEPGFYNLHSGRG
CERCDCHALGSTNGQCDIRTGQCECQPGVTGQHCERCERNHFGFGPEGCKPCDCHPEGSL
SLQCKDDGRCQCREGFVGSRCDQCEENYFYNRSWPGCQECPACYRLVRDKVAEHRAKLRE
LEDLVANLGTGDEKVTDQAFEDRLKQAEREVMDLLREAQDVKDVDQNLLDRLQRVNSTLT
SQIGRLQNIRRTVTETQELAEQARVRVESTQQLIDIATRELEKARMAVANVSVTQPESTG
DPNNMTLLAEEARRLAERHKQEADNIVRVAQTANETSAEAYGLLRRALEGEDQTALEIQE
LHRKYEQAKNISQDLEKQAARVHEEAKKAGDKAVEIYASVSQLAPVGSEALENEANKIKK
EAKDLDRLVDQKLKDYEDLRDDMQGKELEVRNLLEKGKTEQQTADQLLARADAAKALAEE
AAKKGRNTLQEATDILNNLRDFDQRVNDNKTAAEEALRRVPAINRTIAEAAEKTREAQLA
LGNAAADASEAKAKAHEAERIASAVQQNATSTKAEAERTFAEVTGLDSEVNNMLQQLQEA
EKELKRKQDDADQDMMMAGMASQAAQEAEINARKAKNSVTSLLNDINKLLEQLGQLDTVD
LNKLNEIEGFLNQAKGEMQSSELDRKVSALEREARSQEAAMLDYDRDIAAIRRDVRNLED
IRRTLPTGCFNTPSIEKP
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgccggggacccccagttatgccccgacagcggaggcggccctcccggcatgcactgcc
ttgagccctggacaccaccccagtcccccagcgcgcgccccccaggctcctccccggacg
ccctctgcgcctcctccaggccctgctcgaggggcccctttcctctccccaaccaagcaa
gccacgccccacgtcgaggccacgccctctccccaaccggccacgcccacccgctcgccg
agccccttatttccccaagccacgcccttacccatggagaccccgcccaccaacagctca
accacgcccccgatcaggcatagcccgcccacacaccaggctccgcccccgccccgcccg
ccgccgcggcctgagggccggacgcgcagagctcggcgtgcggagggaggacgggcgggg
agcctgcggctcggggggcctgaggcggcggctctgctgagcgagagcggagcggaggcc
gggcgcggtcggactctcggggcctccccgcgctccttcgtccctccgagggcctgcggt
aggaagcctgcggggcccgcgcgccgcgcccgcgtccttgccttccttcccgcgctgccc
ggaggacttcggcggcgggcggccccggtgggccgaggcgcgcacgatgcgggcgcgggc
tggggcgcgggcctggctgtggccgctgctggcggcgctggccgtggggccgcacgcgcg
ggccgccatggaccgagtgcgtggccgagggacggccgcccgcagcgctgcatgccgnag
ttcgtcaacgccgccttcaacgtgtcggtggcggccaccaacacgtgcgggagcccgccg
gaggagtactgcgtgcaaggaccggggtcacggagccgtcacaagtcgtgccacctgtgc
gacgcgggccagcccccacctggcggcacggcgcgccttctcaccgactacaacaaccag
gccgacaccacctggtggcagagccagaccatgctggcgggcgtgnagtacccacggcca
tcaacctcacgcttgcacctgggcaaggcctttgatatcacctacgtgcgcctcaagttc
cacaccagccggcccgagagctttgccatctacaagcgcacccgagaggatgggccgtgg
gtgccgtatcagtactacagcggctcctgcgagaacacctacggcaaggccaaccgtggc
ttcatccgcacgggtggggacgagcagcaggcactgtgcaccgatgagttcagtgacatc
tccccgctcacaggcggcaatgtggctttctccaccctggagggccggcccagcgcttac
aactttgacaacagccccgtcctgcaggagtgggtgacagccactgacatccgggtcact
cttaaccgcctcaacacatttggggatgaggtgttcagcgaccccaaagtcctcaagtcc
tactactacgccatctctgacttcgctgttgggggaaggtgcaagtgtaatgggcatgcc
agtgagtgtgtgcgggatggccggggccagctggtgtgtgactgcaagcacaacacctat
gggccagactgcgaaaagtgtctgcctttcttcaatgaccgcccgtggcgccgggccaca
gccgagagcgccagcgagtgtctgccctgtgactgcaatggccgctcccaggagtgctac
ttcgaccctgagctctatcgctctaccggacacggcggccactgtaccaattgccagggg
aacacggatggggctaagtgtgagcggtgccgagaaaacttcttccgtctgggaacccac
gaagcctgtgccccgtgccattgtagcgctgtaggttccctgagtactcagtgcgacagc
tatggcaggtgcacctgtaagccaggagtgatgggggacaagtgtgaccgctgccagcct
ggctaccactccctcacggaggcaggctgtaggccttgcgtttgtaacccttcgggcagc
attgatgagtgcaatgtggaaacaggacgctgcgtctgcaaggacaatgtggagggcttc
aactgcgagaggtgtaaacctggatttttcaacctggagccctcaaacccaagaggctgt
gtcccctgtttctgcttcggacactcctcagtttgcaccaatgccgtgggctacagcacc
tattccattacctccacttttcgcttagatgatgatgggtggcacgctgagcaaagagat
ggctccgatgcttcgctggactggtctgcggagagacaagatgtgtctgtcatctctgac
agctattttccaagatattttattgcgccagctaagttcctgggccagcaggtgctgagt
tatggtcagaacttttccttctccttccgcgtggaccggccggacacccgcctgtccgca
gaggatgtggtgcttgagggggctggcctgagggtgtctgtgcccctgatcgctcagggt
aatgcttaccccagtgagaccaccgtgaagtacatcttcagactccatgaagccactgat
tacccctggaggccacccgtgaccctcttttccgaatttcaaaagcttctcaacatttaa
accgctatcaagatccgtgggacatatagcgaaaggagtgctggctatttggacgatgtc
accctggctagtgcccggcctgggcctggggtccctgccaactgggtggagatgtgcacc
tgcccagcaggctatgggggtcagttctgcgagacatgtctccccggctttcggagggag
accccgagtcttggtccctacagcccgtgtgtgctctgcacctgcaatgggcacagcgag
acctgtgatgctgagagcggcgtgtgcgactgcacggacaacacggccggcccccactgc
gagaagtgtgcggacggttactatggggatgccacagcaggcactacagctgactgccag
ccctgcccatgtcctgggggctccagctgtgctgctgtgcccaagaccggggaggtggtc
tgcaccaactgccctatgggcaccactgggaagcgatgcgagctatgtgacgacggctat
ttcggggaccccctgggccaggcgggcccagtgcgactgtgccgccagtgccgctgcaat
ggcaacattgatcccaatgctgtgggcaactgccaccggttgagtggggagtgtctcaag
tgcatctacaacacggctggcttctactgcgaccgctgccgccctggcttctatggggac
cccttggcccccaaccccgcagacaagtgcaaagcctgcagctgtgatccctttggaaca
gccgagcagcagggtggctgcaacgcagtgacaggccagtgcgaatgtcgaccccatgtg
acaggccgagactgtggggcttgtgagccgggcttctacaacctgcacagtggccgcggc
tgtgagagatgtgactgccatgccctgggctccaccaatgggcagtgtgacatccgcacg
ggtcagtgtgagtgccagccaggtgtcactggccagcactgtgagcgctgtgagcggaac
cactttggattcgggcccgaaggctgcaaaccctgtgactgccaccccgagggctcactg
tccctgcagtgcaaggatgatgggcgttgccagtgccgagaaggctttgttggcagccgc
tgcgaccaatgtgaggagaactacttctacaaccgctcatggcctggctgccaggagtgt
cccgcctgctaccgcttggtcagagataaggtggctgagcaccgcgcgaagctccgggag
ctggaggatcttgtcgccaacctgggtactggcgacgagaaggtgacagaccaggccttt
gaagacaggctcaagcaggctgaaagggaggtcatggacttgctgcgagaggcccaagat
gtcaaagatgtggaccagaaccttctggatcgcctgcagagggtcaatagcaccctgacc
agccagattggccgcctgcagaacatccggcgcacagtgactgagactcaggaactggct
gagcaggcgcgtgtgcgtgtggagagcacccagcagctcatcgacattgcgacccgggag
ctagagaaggccaggatggccgtggccaatgtgtctgtcacacagccagagtccacgggt
gaccccaataacatgacgctcctggctgaggaggcccgccggctggcagaacgccacaag
caggaagctgacaacattgtacgtgtggcccagactgccaacgagacatcagcagaggcc
tatgggctgctccggagggcactggaaggggaggaccagacggcgctggagatccaggag
ctgcatcggaagtatgagcaggccaaaaatatctcccaggacctggagaagcaggcagcc
cgggtacacgaagaggccaagaaggcaggggacaaggccgtggagatctacgccagcgta
tcccagctggcacctgtgggctctgaggcgctggagaacgaggccaataaaatcaagaaa
gaagccaaggatctggaccgcctcgttgaccagaagctgaaggactatgaggacctccgg
gacgacatgcaggggaaggaactggaagtcaggaacctcctggagaagggcaagacagag
cagcagactgccgaccagctgctggcaagggctgatgcagccaaagcattggccgaggag
gccgccaagaaggggcgcaacacactgcaggaagccacagacatcctcaataacctgaga
gactttgaccagcgggtgaatgacaataagacggcggctgaggaggccctgcgcagagtc
ccggccatcaaccgcaccattgcagaggcagctgagaagacgcgggaagcgcagctggca
ctgggcaatgctgctgccgatgcctcagaggccaaggccaaggcacacgaggctgagcgg
attgcaagcgccgtccagcagaatgccaccagcaccaaggctgaagccgagaggaccttc
gccgaggtgacgggcctggacagcgaggtgaacaacatgctccagcaactccaggaggcc
gagaaggagctgaagaggaagcaggacgatgctgaccaggacatgatgatggcgggcatg
gcttcccaggctgcacaagaagccgagatcaatgcgcggaaggccaaaaactctgtcacc
agcctcctcaatgacatcaacaagctcctagaacagcttggccagctggacactgtggac
ctgaacaagctgaatgagattgagggcttcttgaaccaggccaagggcgagatgcagagc
agcgaactggaccggaaggtgtcagctctggagcgggaggcacgcagccaggaagccgcc
atgctggattatgatcgcgacattgcggccatccgcagggatgtgcgcaaccttgaggac
atccgcaggacgctgcccaccggctgcttcaacaccccgtccatcgagaagccctag
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integrated database retrieval system
