Suncus etruscus (white-toothed pygmy shrew): 126014276
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Entry
126014276 CDS
T09902
Symbol
NEO1
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin
KO
K06766
neogenin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04350
TGF-beta signaling pathway
setr04360
Axon guidance
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126014276 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126014276 (NEO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126014276 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126014276 (NEO1)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
DCC/UNC5 family
126014276 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Ig_5
C2-set_2
Fn3_VIN3
fn3_2
Tissue_fac
SusE
EphA2_TM
TMEM154
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
126014276
NCBI-ProteinID:
XP_049633545
LinkDB
All DBs
Position
1:11881750..12080510
Genome browser
AA seq
1463 aa
AA seq
DB search
MAAERGARRLPGTSCCWLLLLLLLILGRRGLCTAVARTSSPPQSPGASVRTFTPFYFLVE
PVDTLSIRGASVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLSDGSLLISNVVHSK
HNXPDEGYYQCMATVESLGTIVSRTAKLTIAGLPRFTSQPEPSSVYAGNSAILNCEVNAD
LVPFVRWERNRQPLHLDDRVIKLPSGTLVISNATEGDEGLYRCVVESGGPPKYSDEAELK
VLPDSEMTASLAFLKQPSSLVRVIGQSVVLPCVASGFPMPAIRWMKNDEVLDTESSERLA
LLAGGSLEISEVTVDDAGTYSCVADSGNETIEAHAELTVQAQPEFLKQPTNMYAHESMDI
VFECEVTGKPTPAVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGN
AQAGAQLIILEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYT
KEGIARERVENTSRPGEMQVTIQNLMPATVYIFRVVAQNKHGSGESSAPLRVETQPEVQL
PGPAPNIRAYATSPTSVTVSWETPLSGNGEIQNYKLYYMEKGTDKEQDVEVSSHAHTISG
LKKHTEYSFRVVAYNKHGPGVSTQDVAVRTFSDVPSAAPQNLSLEVRNSKSILIHWQPPP
SASQNGQVTGYKIRYRKASRKSDVTEIVVNGSQLSQLIEGLDRGTEYNIRVAALTVNGTG
PATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIG
SPHAQTIKVDYKQRYYTIENLDPNSHYVITLKAFNNVGEGVPLYESAVTRPHTDTAEVDL
FVINAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTN
IPANSKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPP
KDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQ
IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSDKMSNDQASGSAGKGNRLPDL
GSDYKPPMSGSNSPHGSPTSPLDSSMLLVIIVSVGVITIVVVVIVAVFCTRRTTSHQKKK
RAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDIT
PVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSL
DNPHHHFHSSSLASPARSHLYHPGSPWPVGTSMSLSDRANSTESVRNTPSTDTMPASSSQ
TCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPGYDPA
LPSTPLLSQQALNHHLHAVKTASIGTLGRSRPPMPVVVPSAPDVQETTRMLEDSESSYEP
DELTKEMAHLEGLMKDLNAITTA
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcggggtgctcggcgtctccccggcacgtcttgctgctggctgctgctg
ctgctgctgctgatcctggggcgccggggtctctgcaccgcggtggccaggacgagctcc
ccgccgcagtccccaggagccagtgttcgaacattcactccattttatttccttgtggag
ccggtggatacactttctattagaggagcttctgttatattaaactgttcagcctattct
gaaccttctccaaaaattgaatggaaaaaagacggaacctttttgaacttagtatcagat
gatagacgccagctcctctcagatgggtctttactcatcagcaacgtagtgcattccaag
cacaatnaaccagatgaaggttattaccagtgtatggccaccgtggagagtcttggaact
attgtcagtagaacagcaaagctcacaatagcaggtctgccaagattcaccagccaacca
gaaccttcttccgtttatgctgggaacagtgcaattctgaattgtgaagtgaatgcagat
ttagtcccatttgtgagatgggaacggaatagacagcctcttcacttggatgatagagtt
atcaaacttccaagtgggacactggttatcagcaatgctactgaaggagatgaaggactt
tatcgctgtgtagttgaaagtggtggtcctccaaagtatagtgatgaagctgaactaaaa
gttcttccagattctgaaatgacagcaagcttggcatttttgaaacaaccatcgtccttg
gtcagagtcattggtcagagtgtggtgctcccatgtgttgcttcaggatttccaatgcca
gccatccggtggatgaaaaatgatgaagtgcttgacacagaaagctctgaaagactggca
ttactggctggtggtagtctggagatcagcgaagtcacggttgacgatgcagggacttac
tcttgtgtagctgacagtgggaatgaaaccattgaagctcatgcagaacttacagtacaa
gcccaacctgaattcctgaagcaacctacaaatatgtatgctcacgaatctatggatatt
gtatttgagtgtgaagtgactgggaaaccaactccagctgtgaagtgggttaagaatgga
gatatggtcataccaagtgattactttaagattgtaaaagaacataatcttcaagttctg
ggtctggtaaaatcagatgaaggattttatcagtgcattgctgagaatgatgttggaaat
gcacaagctggagcccagttgatcattctagagcatgcaccagccacgacaggaccactg
ccctcagctccacgggacgtcgtggcttccctggtctctactcgcttcataaaacttaca
tggcggacacctgcatcagaccctcatggcgacaacctcacctactctgtcttctacacc
aaggagggcattgcgagggaacgtgtcgagaataccagtcgccctggagaaatgcaggta
accattcaaaacctgatgccagccactgtctacatcttcagagttgtggctcagaataag
catggctccggagagagctcagctccccttcgagtggaaacacagccagaggttcagctt
cctggcccagcacctaacatccgagcatacgcaacctcgcctacttcagtcactgtgagc
tgggaaacaccactgtctggcaatggggaaattcagaattacaaattgtactacatggaa
aaagggacggataaagagcaggatgttgaagtttctagtcatgcccacaccattagtggg
ttgaaaaaacacacagagtatagtttccgtgtggtggcctacaataaacatggtcccgga
gtctctacccaagatgttgctgtccgaacattttcagatgttcccagtgctgctcctcag
aatctgtctttggaagtcagaaattcaaagagtattttgattcactggcagccacctcct
tcagcttcacaaaacgggcaagttactggctacaagattcgctaccgaaaggcctctcgc
aaaagtgatgtcactgagatagtggtgaacggcagccagctgtctcagctgattgaaggt
ctcgatcggggaactgaatataatattcgagtggcggctctaactgtcaacggcacaggc
cccgccactgactggttgtctgcggaaacttttgaaagtgacttagatgaaactcgtgtt
cctgaagtgcctagttctctgcatgtccgcccacttgtcactagcattgtagttagctgg
acgcccccggagaatcagaacattgtggttcgaggttacgccattggttacggcattgga
agtccccatgcacagacgatcaaagtggattataagcaacgctattacaccatcgagaat
ctggatcccaactcccactatgtaatcaccctgaaagcatttaacaacgtgggtgaaggg
gtccccctgtacgagagcgctgtgaccaggcctcacacagacactgctgaagttgattta
tttgttattaatgctccatacactccagtgccagatcccactcccatgatgccacccgtg
ggggtccaggcttccattctgagtcatgacaccataaggattacctgggctgacaactcc
ctgcccaaacaccagaagataacagattcccgttactacacggttcgatggaaaaccaat
atcccggcaaactccaagtacaagaatgcaaatgccacaactttgagttatttggtgact
ggcttaaaacccaatacactctacgaattttctgtgatggtcaccaaaggccgaagatca
agcacatggagtatgaccgcacatggaaccacctttgaattagttcctacttctccaccc
aaggatgtgacagtcgtgagtaaagaggggaaaccgaggaccataattgtgaattggcag
cccccctctgaagctaacggcaaaattacaggttacatcatatattacagcactgatgtg
aatgcggagatccatgactgggttattgagccagttgtgggaaacaggctcactcatcag
atccaagaattaacactcgacacaccatactacttcaaaatccaagcccggaactcaaaa
ggcatggggcccatgtctgaagctgtccagttcagaacacctaaagcggactcctctgat
aaaatgtccaatgatcaagcctcagggtctgcaggaaaaggaaatcgactgccagacctt
ggatctgactacaaacctccaatgagcggcagtaacagcccccatgggagccccacgtct
cctctcgacagcagcatgctcctggtcatcatcgtctcggtgggtgtcatcaccatcgtg
gtggtcgtgattgtggctgtcttctgcacccggcgtaccacctctcaccagaagaagaaa
cgagctgcttgcaagtctgtgaatggctcccacaagtataaaggcaactccaaagatgtc
aaacccccagacctctggatccatcatgagagactggagctaaaacccatcgataaatct
ccagacccaaaccccatcatgaccgatacaccgattcctcggaactctcaagatatcacg
ccagtcgacaattctatggacagcaatattcaccagcggcggaactcatacagaggacat
gaatctgaagacagcatgtcgacactggctggaaggcgaggaatgagacccaaaatgatg
atgccctttgattcccagccaccccagcctgtgattagtgctcatcccatccattccctc
gataaccctcaccatcatttccactccagcagcctcgcttctccagctcgcagtcatctc
taccacccgggcagcccatggcccgttggcacttcaatgtccctttcagacagggccaat
tccacagaatctgtccgcaatacccccagcactgacaccatgccagcctcctcatctcag
acatgctgcactgatcaccaggaccccgaaggtgctacaagttcttcttacctggccagc
tctcaagaggaagattcaggccagagtctccccacggcgcatgtccgcccttcccacccg
ctgaagagctttgctgtgccagccatccctccccctggccctcctggctatgatcctgcc
ttgccaagcacaccattactgtcccagcaagctctcaaccatcacctccatgcagtgaag
acggcctccatcgggacactcggacggagtcggccccccatgccagtggtggtacccagt
gcccctgacgtgcaggaaaccacgaggatgctggaagactctgagagtagctatgaacca
gatgagctgaccaaagagatggcccacctggaaggactcatgaaggacctcaatgccatc
acgacagcatga
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