Suncus etruscus (white-toothed pygmy shrew): 126014347
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Entry
126014347 CDS
T09902
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04024
cAMP signaling pathway
setr04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
126014347 (HCN4)
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
126014347 (HCN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126014347 (HCN4)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
126014347 (HCN4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
126014347
NCBI-ProteinID:
XP_049633607
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Position
1:complement(12111958..12160692)
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AA seq
1171 aa
AA seq
DB search
MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEDEAAAGGPQDPRRRSIRLRPLPSPSPS
AAAAEPRGSALADGEGPARGAGKSSTNGDCRRFRGSLASLASRGGGSSGHLHDSAAEERR
LIGEGDASPGEDRTPPGGLARESERPGAPGPPSASPPPPPPASACSEPPSADTAIKVEGG
AAAAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSA
GFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDL
VLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKT
ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCH
WDGCLQFLVPMLQDFPDDCWVAINGMVNNSWGKQYSYALFKAMSHMLCIGYGRQAPVGMS
DVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQR
IHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTK
LRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRT
ASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLN
SGVFNYQENEIIQQIVQHDREMAHCAHRAQAAAASGGPAPGPAPVIWTPLIQAPLQAAAA
TTSVAIALTHHPRLPAAVFRPPPPPGQTPRHRASRLHSLLPAGSPAQLDTPSSSSFHIQQ
LAGFSAPAGLSPLLPSAGSPSPAITPTPTPAGPAGFGPFHQAPGGSVSSSDSPLLTPLQP
GARSPQGRGALGLLEHFAPPPPAARSPAGSPGQPGQPPGELSLSPGLGAGAPGTPETPPR
QPERPGFPAGVSGAASPVAFSSPRTGLSPAGHSPGPPRTFPGPPPRASGSHGSLLLAPAS
SPPPPLPQVPQRRGTPPLTPGGRLTQDLKLISASQPALPQDGAQTLRATSPHSSRESVAA
FAPLPRVGAGGSSSSSSSGGLGVPGRPYGAPGQHQHVTLPRKTSSGSRPPPLSLFGAKAA
SPGGPPVTAAAAQREPGAGAEPGRSKLPSNL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgccgccgtccatgcgcaagcggctctacagcctcccgcagcaggtgggg
gccaaggcgtggatcatggacgaggaggaggacgccgaggacgaggcggcggcgggcggc
ccccaggacccccgccgcaggagcatccgactgcggccgctgccctcgccttcgccctcg
gcggcggccgctgagccccggggctcggcgctggcggacggcgagggtccggcccggggc
gcgggcaagtccagcaccaacggcgactgccggcgcttccgcgggagcctggcctcgctg
gccagccggggcggcggcagcagcgggcacctgcacgactcggcggcggaggagcggcgg
ctcatcggcgagggcgacgcgtcccccggcgaggacaggacgcccccgggaggcctggcc
cgggagtccgagcgccccggcgccccggggccgccctccgcctcgcctccaccgccgccg
ccggcctcggcttgcagcgagccgccctccgcggacacggcgatcaaagtggagggaggc
gcggccgccgccgccgccggcgaccagatcctccccgaggccgaggtgcgcctgggccag
gccggcttcatgcagcgccagttcggggccatgctccagcccggggtcaacaaattctcg
ctgaggatgttcggcagccagaaagcggtggagcgcgagcaggagcgggtcaagtccgcc
ggcttttggatcatccacccctacagcgacttcagattttactgggacctgacgatgctg
ctgctgatggtgggaaacttgatcatcattcccgtgggcatcaccttcttcaaggatgag
aacaccacgccctggattgtcttcaacgtggtgtccgacaccttcttcctcatcgacctg
gtcctcaacttccgcacagggatcgtggtggaggacaacaccgagatcatcctggaccca
caacggatcaagatgaagtacctcaaaagctggtttgtggtggatttcatctcctccatc
cctgtggattacatcttcctcatcgtggagacacgcatcgactcggaggtctacaagaca
gcccgggccttgcgtatcgtgcgcttcaccaagatcctcagcctcctgcgtctcctgcgt
ctctcccgcctcattcgctacattcaccagtgggaggagatcttccacatgacctatgac
ctggcgagtgccgtggtgcgcatcgtgaatctcatcggcatgatgctgcttctgtgccac
tgggatggctgcctgcagttcctggtgcccatgctgcaggacttccctgatgactgctgg
gtggccatcaatggcatggtgaacaactcgtgggggaagcagtactcatacgcgctcttc
aaggccatgagccacatgctgtgcattggctacgggcggcaggctcctgtgggcatgtcg
gacgtgtggctcaccatgctgagcatgatcgtgggtgccacctgctatgccatgttcatc
ggccacgccaccgcgctcatccagtccttggactcctcccggcgccagtaccaagagaag
tataagcaggtggagcagtacatgtccttccacaagctgccgcctgatactcggcagcgc
attcacgactactacgagcaccgctatcaaggcaagatgtttgatgaagagagcatcctg
ggggagctgagtgagccgctccgggaggagatcatcaactttaactgccggaagcttgtg
gcctccatgccgctctttgccaatgcggaccccaacttcgtgacgtctatgctgaccaag
ctgcgcttcgaggtcttccagcctggcgactacatcatccgtgagggcaccatcggcaag
aagatgtactttatccagcatggcgtggtcagcgtgctcaccaagggcaacaaggagacc
aaactagccgatggctcctactttggagagatctgtctgctgacgcgcggccggcgcacg
gccagcgtgagagcggacacctattgccgcctgtactcgctgagcgtggacaacttcaac
gaggtgctggaggaataccccatgatgcggagggccttcgagaccgtggcgctggaccgc
ctggaccgcattggcaagaagaactccatcctcttgcacaaggtgcaacacgacctcaac
tcgggcgtgttcaactaccaggagaacgagatcatccagcagatcgtacagcacgatcgc
gagatggcgcactgtgcccaccgcgcccaggccgccgctgcgtccggcgggcccgcaccg
gggccggctccggtgatctggacgccgctgatccaggcgccgttgcaagccgccgcggcc
accacgtcggtggccatcgcgctcacgcaccacccgcgcctgcccgccgctgtcttccgc
ccgccaccgcctccgggccagaccccgcggcaccgcgcctcgcgcctgcactcgctgctc
cccgccggcagcccggcgcagctggacacgccgtcgtcgtcctccttccacatccagcag
ctggccggcttctcggcgcccgccgggctgagcccgctgctgccatccgccggttcccca
tcgcccgcgatcacgcccacacccacgcccgccggccccgcgggcttcggcccgttccac
caggcgcccggcggctccgtgtcctcgtccgactcgcccttgctcacgcccctgcagccc
ggcgcgcgctccccgcagggtcgcggggcgctgggactcttagagcatttcgcgccgccg
ccccccgctgccaggtccccggcgggcagccccgggcagccgggccagcctcccggcgag
ctgtcactgtctcccggcctgggcgcgggcgcgccgggcacccccgagacgccgcccagg
cagcccgagcgccccggcttccccgcgggggtgtccggggcggcctccccggtcgccttc
tcctccccccgcaccggcctcagccccgccggccacagccccggcccgcccaggactttc
cccgggcccccgccgcgcgcctccggctcgcacggctccttgctgctggcccccgcgtcc
agcccgccgccgccgctgccgcaggtgccccagcgtcgggggaccccgcccctgaccccc
gggggccgcctcacccaggacctcaagctcatctcggcctcccagccggccctgccccag
gacggggcgcagactttgcgcgccacgtccccgcactcgtcccgggagtcggtggccgcc
tttgcgcccttgcccagggtcggggccggcggcagcagcagcagcagcagcagcgggggg
ctcggcgtgcccgggaggccctatggcgcccccgggcagcaccagcatgtcaccctgcct
cggaagacatcctcgggttctcggccaccccctctctccttgttcggagccaaggccgcc
tcccccggcggcccccctgtgactgcagccgccgcgcagcgggaacctggggccggggcg
gagccggggcgctccaaactgccgtccaacctctag
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