Suncus etruscus (white-toothed pygmy shrew): 126015407
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Entry
126015407 CDS
T09902
Symbol
TRIM29
Name
(RefSeq) tripartite motif-containing protein 29
KO
K12010
tripartite motif-containing protein 29
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126015407 (TRIM29)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126015407 (TRIM29)
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Ortholog
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GFIT
Motif
Pfam:
TRIM_CC
zf-B_box
ANCHR-like_BBOX
DUF7596
Motif
Other DBs
NCBI-GeneID:
126015407
NCBI-ProteinID:
XP_049633884
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Position
8:14220346..14234415
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AA seq
590 aa
AA seq
DB search
MDNATDTARSNGASPEAREARSPPGPSSSPDIVGAKSDKDAKSHNGHNGEATAEGKSQGG
GPKTGEGRSALFSGNEWRRPVVQFVDSVDDKASSSYFSMDSGEGRRSPYAGLQLGAAKKP
AVTFADKGELRKSLFSEPRKPSVTIVEPGEARRHSFPRQDTGPSLRAKATEEVLCDSCIG
NKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPLHGKTMELFCQT
DQTCICYLCMFQEHKNHSTITVEEAKAEKETELSLQKEQLQLKITEIEDEAEKWQKEKDR
IKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIVDALDERAKVLH
DDKQTREQLHSISDSVLFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQALGIFKDDLLN
VCMRHVEKMSKADLSRSFIERSHMENGSDHRYMNNYMNNSYNSEWGAPDTMKRYSMYLTP
KAGVRTSYQPGSSSRITKETNQKNFNNLYGTKGNYTSRVWEFSSTIQSGDDSPPVQGNSS
FSLKGYPSLLRSQSPKAQPQTWKSGKHTMLSHYRPFYVNKGNGIGSNEAP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgccaccgacactgccaggagcaacggtgccagcccagaagcccgggaagcc
cgcagcccacctgggcctagcagtagcccagacatcgtcggggccaaaagtgacaaagat
gccaagagccacaacgggcataacggggaggccacagctgagggcaagagtcagggcggt
ggccccaagactggggagggcaggagcgccttattttctggcaatgagtggcggcggcca
gtcgtgcaattcgtggactcagtggatgacaaggcttcttcaagctacttcagcatggac
tccggggaaggccggcgctcaccctatgcaggcctacagctgggtgctgccaagaaaccg
gccgtgacctttgcagataagggggagcttcgcaagagcctcttctccgagccccgaaag
ccctcggtgaccatcgtggagccgggtgaggcccgacgccacagcttcccccggcaggac
actggacccagcctgcgtgccaaggccaccgaggaggtgctatgcgactcctgcatcggc
aacaagcagaaggccgtcaagtcatgcctggtgtgccaggcctccttctgtgagctgcat
ctcaagccccacctggagggtgccgcctttcgagaccaccagctgctggagcccatccgg
gattttgaggcccgcaagtgcccgctgcacggcaagaccatggagctcttctgccagacg
gaccagacgtgcatctgctacctgtgcatgttccaggaacacaagaaccacagcaccata
accgtggaggaagccaaggccgagaaggagacggagctctccctgcagaaggaacagctg
cagctcaagatcacagagatagaggacgaggctgagaaatggcagaaggagaaggaccgc
atcaagagcttcaccaccaacgagaaggccatcctcgagcagaacttcagggacctggtg
cgtgacctggagaagcagaaggaggaggtgcgggcggcgctggagcagcgcgagcaggat
gcggtggaccaggtgaaggtgatcgtggatgcgttggacgagcgggccaaggtcctgcac
gacgacaagcagacgcgggagcagctgcacagtatcagcgactcggtgctctttctgcag
gaatttggggccctgatgagtaactactcactgccaccacccctgcccacctaccacgtc
ctgctggagggtgagggcctgggtcaggctctgggcatcttcaaggacgacttgctgaac
gtatgcatgcggcacgtagagaagatgagcaaggctgacctgagccgcagcttcatcgag
aggagccacatggagaatgggagtgaccaccgctacatgaacaactacatgaacaacagc
tacaacagcgagtggggcgcgcctgacaccatgaagaggtactcaatgtacctgacaccg
aaagcaggggtccggacatcctaccagccgggatcctccagccgcatcaccaaggaaact
aaccagaagaacttcaataacctctatggcaccaaagggaactacacatcgagagtgtgg
gagttctcctccaccatccagagtggcgacgactcgccccctgtccagggaaactcctcc
ttctccctaaaagggtacccctccctcctccggagccagagccccaaggcccagccccag
acctggaaatctggcaagcacaccatgttgtctcactaccggcccttctacgtgaacaaa
ggcaacggcattggctccaacgaggcaccctga
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