Suncus etruscus (white-toothed pygmy shrew): 126015409
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Entry
126015409 CDS
T09902
Symbol
NECTIN1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03266
Virion - Herpesvirus
setr04514
Cell adhesion molecules
setr04520
Adherens junction
setr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
126015409 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126015409 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
126015409 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
126015409 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126015409 (NECTIN1)
04090 CD molecules [BR:
setr04090
]
126015409 (NECTIN1)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
Nectin family
126015409 (NECTIN1)
CD molecules [BR:
setr04090
]
Proteins
126015409 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
C2-set_2
Ig_3
Ig_2
ig
I-set
TM_ErbB1
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
126015409
NCBI-ProteinID:
XP_049633887
LinkDB
All DBs
Position
8:14456461..14500952
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AA seq
515 aa
AA seq
DB search
MARMGLAGAGGRWWPLALVGLSAFFLPGAHGQAVQVNDSMSGFIGTDVVLHCSFANPLPG
VKITQVTWQKATNGSKQNVAIYNPSMGESVLAPYRGRVDFLRPSFTDGTIRLSRLELEDE
GVYICEFATFPAGNRESQLNLTIMAKPTNWVEGPPTVLRARKGSDTKMQVATCTSANGKP
PSVVSWETRLKGEAEYKEIRNPNGTVTVVSSYRLVPRRDAHQQTLACIVNYHTDRFRESV
TLNVQYEPEVVIEGFDGNWYLQRSDVKLTCHADANPPATDYHWTTLNGSLPKGVEAQNRT
LFFKGPLSYSVAGTYICEATNPIGTRSGQVEVNITEFPYTPAPPEHDRRAGPVPTAIIGG
VVGSILLLLLVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGVPQHHPPAAQNLQYP
DDSDDEKKPGPLGGSSYEEDEDDEGGGERKLGGPHPKYDEDAKRPYFTVDEAEARQDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcccggatggggctggcgggcgccggtggacgttggtggccactcgctctggtgggc
ttaagcgccttcttccttccaggtgcccatggccaggcagtgcaagtgaacgactccatg
tccgggttcattggcaccgacgtggtgctgcactgcagctttgccaaccccctgcccggc
gtgaaaatcactcaggtcacatggcagaaggctaccaacggttccaagcagaatgtggcc
atctacaacccctccatgggtgagtcggtgctggccccataccgcggccgcgtggacttc
ctgcggccgtccttcactgacggcactatccgcctgtcccgtctggagctggaagatgag
ggcgtttacatctgtgaattcgccaccttccccgcgggcaaccgcgagagccagctcaac
ctcactataatggccaaacccaccaactgggtggagggccccccgaccgtgctccgcgcc
aggaaggggtcagacaccaagatgcaggtggccacctgcacatcggccaacgggaaaccc
cccagcgtggtgtcatgggagacgaggctgaagggcgaggcagagtacaaagagatccgg
aaccccaatggcacagtgactgtggtcagcagctaccgcctggtgccccgccgggacgcc
caccagcagaccctagcctgcatcgtcaactaccacacggaccgcttccgggaaagtgtg
accctcaacgtgcagtatgagccagaagtggtcattgagggtttcgacgggaactggtac
ctgcagcgcagcgatgtgaaactcacgtgccatgcagacgccaaccccccagccaccgat
tatcattggactacgctgaacggctctctccccaagggtgtggaggcccagaacagaaca
ctcttcttcaagggtcccctcagctacagtgtggcggggacctacatctgtgaagccacc
aatcccattggcacccgctccggccaggtggaggtgaacatcacagagttcccctacaca
ccggcccctcctgagcacgaccgccgtgccggtccagtgcccacggccatcattggaggc
gtggtaggcagcatcctgctgctgctgctcgtggtaggtggcatcgtggtggccctgcgt
cgccggcgccacactttcaaaggcgactatagcaccaagaaacacgtgtacggcaatggc
tacagcaaggctggagtcccacagcatcacccacccgcggctcagaacctgcagtacccg
gacgactcagacgatgagaagaagcccggcccgctgggcggcagcagctatgaggaggac
gaggacgatgagggtggcggcgagcgcaagctggggggcccccaccccaagtatgacgag
gacgccaagaggccctacttcacagtagatgaggccgaggcacggcaagatggctacggg
gaccggaccctgggctaccagtatgatcctgagcaactggacttggctgaaaacatggtg
tcccagaatgacgggtccttcatttccaagaaggagtggtacgtgtag
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