Suncus etruscus (white-toothed pygmy shrew): 126015474
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Entry
126015474 CDS
T09902
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04270
Vascular smooth muscle contraction
setr04360
Axon guidance
setr04611
Platelet activation
setr04625
C-type lectin receptor signaling pathway
setr04810
Regulation of actin cytoskeleton
setr05135
Yersinia infection
setr05152
Tuberculosis
setr05163
Human cytomegalovirus infection
setr05200
Pathways in cancer
setr05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
126015474 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
126015474 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
126015474 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
126015474 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
126015474 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126015474 (ARHGEF12)
05205 Proteoglycans in cancer
126015474 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
126015474 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
126015474 (ARHGEF12)
05152 Tuberculosis
126015474 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126015474 (ARHGEF12)
Membrane trafficking [BR:
setr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
126015474 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
126015474
NCBI-ProteinID:
XP_049633957
LinkDB
All DBs
Position
8:complement(13894117..14042802)
Genome browser
AA seq
1543 aa
AA seq
DB search
MSGTQPTTLTDRFPLKKPIRHGSILNRESPTDKKQKVERSASHDFDPTDSSSKKTKSSSE
DSRPEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLAESEVDPPASGHMSPLLTSPHSP
GASGNMERITNPVLVGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEI
QETKKHIPQLQEQLSKATGSAQDGAIVTPPKPVGDALAVSDMETEPGDGLGRTDYSGGDT
SRISSDNADSPKSGLKERIYQEENQEKSEITQDADALIGSPSTRVTPHIIGAEDDDFGTE
HEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRRV
FLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIHTMQERVHPEVQRHLE
DFRQKRSMGLTLAESELTKLDAERDKDRGTLEKERACAEQIVAKIEEVLMTSQAVEEDKS
STMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSIL
GPPRRPSRHDNSAIGRAMEIQQKQRHPKHLPTPSSVSPEPQDSAKLRQSAIASDGVDLGY
SPGNPMSTLAPGTVLSQEGGKENETGVKQSGEVPASGDASDCAPRTPNTIFEFPPPPLDQ
VQEEECEVERVAEHGTPKPFRKFDSLAFGESQSEDEQFENDLETDPPNWQQLVSREVLLS
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVFREGILSPSELRKIFSNLEEILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGGEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEKEKV
KRAADHCRQILNYVNQAVREAENKQRLEDYQRRLDTSNLKMSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASSADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICQMAASVKEQSTK
PIPLPQSPPCEGDHDEEEPPKSKGEHHGISVTSMQSPDRELGLGSPLIASKPQPHSLDAS
GKAEVDDLFVTEGQFVKEQCEARTLKDVGVNDAATILAPHLQVPEERWALDALRNLGLLK
QLLVHQLGWTERNTQEGWAHSPRSRTISPGLPADGATQSAENAKAQHPSDGHTPFRTGSG
GSSTSQSPRTSTESSAPRDSVVLAFQDRQASNLLAMDHMLLAPEMLPVEPEGALDESGEH
FFDAREAHSDDNPSEGDGTVKKEEDVNLRISGNYLILDGYEAVQESSTDEEIACSLPPLP
PAGPPCTDSTHQPQHSPQQARSDGAPSPFSPEYLVSPRWGTREEPSFEIQSPPLCADPQS
QIMSCIRKIEANLEHLKKMEESYTLLCQRLAGSALADKHSDKS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagccgaccactctcaccgacaggtttcccctcaaaaaacctattagg
catggaagtattttgaaccgagagtcaccaactgataagaagcagaaagttgagcgcagt
gcatcccatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagag
gacagtagacccgagatatatggcctcgttcagcgttgcgtgatcatccagaaggatgac
aacggatttgggctgacggtcagtggggacaatcctgtcttcgtgcagtctgtcaaagaa
gatggagcagccatgcgggctggggttcagacaggtgatcgaatcatcaaggtgaatgga
actctggtgactcattcaaatcacttggaggtggtgaagctaatcaaatctggttcctat
gtagctcttactgttcagggacgccctcctgggtcgccccagattcctctcgctgagtcc
gaagtagatccaccagcctctggacatatgtctcccctcctgacgtccccacactcaccg
ggcgcctctgggaacatggagcggatcactaatccagtgctcgtgggggaggaaaataat
gtggttcataaccagaaagtagaaattctaagaaaaatgttacagaaagagcaagaacgg
ctacagttattgcaggaagattacagccgaacacctgcgcaaagattgctcaaagagatc
caagagaccaagaaacacatccctcagctgcaagagcagttatccaaagccacaggctct
gctcaggatggagctatagtcacgccccccaagcctgtaggtgacgctttagcagtcagc
gatatggaaacagagcctggtgatggactaggaagaacggactacagtggtggagatact
tctcgaatcagtagtgataatgcagatagtcccaagagtggcctgaaagagcggatttat
caagaggaaaatcaggagaaaagtgaaataactcaggatgctgatgctcttattgggagt
ccctcaacccgtgtaacaccacacatcattggagccgaggatgatgattttggtactgaa
catgaacagatcaatgggcagtgcagctgtttccagagtattgaactgctgaaatctcgt
cctgctcacttggctgtttttttacaccatgtagtttcacaatttgaccctgcaacattg
ctctgttatctctattctgacttgtataaacagaccaattccaaggagactcgtcgtgtc
ttcctcgagtttcatcagttcttcctggatcggtctgcacacctgaaagtttctgttcct
gatgaaatatcagtagatcttgaaaagagaagaccggaactgattcctgaggatctccat
cgccactatatccacacgatgcaggagagagtccacccggaagttcagcgacatttagaa
gattttcggcagaaacgtagtatggggctgaccttggctgaaagcgaactgactaaactt
gatgcagaacgagataaggaccgagggactttggagaaggagcgggcatgtgcagagcaa
attgttgccaaaatcgaagaagtgttgatgacctcacaggctgtagaggaggataagagt
tcaacaatgcagtatgttattctcatgtacatgaagcatttgggagtaaaagtgaaagaa
ccccgaaatttggagcacaagcggggtcggattggattccttcccaagatcaagcaaagt
atgaagaaagatagggaaggcgaagaaaaaggaaagcgaagaggatttcccagcatccta
ggacccccaaggagaccaagccgccatgacaacagtgcaattggcagggccatggagatc
caacagaagcagcgccacccgaagcacttacccacaccttcatcagtgagtcccgaaccc
caggactctgctaagttgcgccagagcgcaatagccagcgacggagtagacttggggtat
tcgccgggcaatcccatgtcaactctggctcctggcactgttctttcccaggaaggaggg
aaagagaatgagacgggagtaaagcagtctggagaagtacccgcatcgggagatgcctct
gactgcgctccgcgtactcccaataccatctttgaattcccaccgcctccactggaccag
gtgcaggaggaggagtgtgaagtagaaagagtggctgaacatggaacaccaaaacccttt
cgaaagtttgatagcttggcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatcctcccaactggcagcagcttgttagccgagaagtgttgctgagc
ctgaagccttcagagatcaaaagacaggaagtgattaatgaattgttctacactgaaaga
gctcatgttcgaacactaaaggttcttgatcaagttttctatcagcgggtgttccgagaa
ggaattctatcaccttcagagctacggaaaatcttttcgaatttggaagagattcttcag
cttcacatcggactgaatgagcaaatgaaagcagttcgaaaaaggaatgaaacctctgtt
attgatcagattggggaagatttgttgacatggttcagtggaccaggcggggagaagttg
aaacacgccgctgccaccttttgcagtaaccagccttttgccttggaaatgatcaaatct
cgtcagaaaaaggattctcgattccagacctttgtgcaagatgctgagagtaatccgctg
tgtcgccgcctgcagctgaaggatatcatccccactcaaatgcagaggcttacaaagtac
cctcttctgttggataatattgccaagtacacagaatggcctacagaaaaggagaaagtg
aagagagctgctgatcactgccgccagatcttaaattatgtcaatcaggctgtcagggaa
gcagaaaacaagcagcgcttagaagactatcagcgtcgtcttgatacctccaatctcaag
atgtcagagtacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
atccacgaaggaccgttggtttggaaagtaaacagagataaaacaattgatctctacaca
ttattgctggaagacattcttgtgttactgcaaaagcaggatgacagattggtgttacgg
tgccacagtaagatcctggcatcttcagctgacagcaagcacacgtttagccctgtcatt
aagttgaatactgtattggttcggcaggtggcaacagataacaaagccttgttcgtcatc
tccatgtcagacaatggagcccagatctatgagctggtggcgcagacggtttctgagaag
actgtctggcaggaccttatatgtcagatggctgcatcagtgaaggagcagtccacgaag
ccaatcccacttcctcagtctccaccgtgcgaaggagaccatgatgaagaagagcctcca
aaatcgaaaggagagcatcatggaatttcagttacaagcatgcagagcccagacagagag
ttgggattaggatctccactaatagcatcaaagcctcagcctcattcactggatgcctct
ggaaaagcagaggttgatgatctgtttgtgacagaaggacagtttgtgaaggagcaatgt
gaagccaggactctcaaggatgttggggtgaatgacgcagccacaatcctagccccacac
ttgcaagtcccagaagagcgatgggcgttggatgcattaaggaatttgggtctattgaag
cagttgctagtccaccagctgggctggactgagaggaacactcaggaaggttgggcacat
tccccaagatcgcgcaccatctccccggggctgccagcagacggtgccacccagagtgca
gaaaatgccaaggcccagcatcccagtgatgggcacacgccctttcgaactggaagtggt
ggcagttcaactagtcaaagccctcggacttcaactgaatcttctgctccacgggattca
gtggtactggcattccaagaccggcaggccagtaatctgctagcaatggaccacatgctt
ctggccccagagatgctgcctgtggagcctgaaggggccctcgatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataacccatcagaaggtgacggaacggtt
aaaaaggaagaggatgttaacttacgcatctcaggaaactatttgatcctagacggctat
gaagcagtgcaggagagctccacggatgaagagatcgcttgctcgcttccccctttgccc
cctgcaggcccaccctgcacggactccacccaccagccccaacattctcctcaacaagca
cgctctgatggggctccctcacccttcagcccagaatacctggtgtcaccacgctgggga
acaagggaggagcccagctttgagattcagagccctcctttgtgtgcggacccccagagc
cagatcatgagttgcatccgcaagatagaggccaacctggagcacctaaagaagatggag
gaaagttacacccttctttgccaaaggctggctggatcagccctcgcagacaagcactca
gataaaagttag
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integrated database retrieval system
