Suncus etruscus (white-toothed pygmy shrew): 126015484
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Entry
126015484 CDS
T09902
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126015484 (TRIM41)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126015484 (TRIM41)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126015484 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Apolipoprotein
DUF3631
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
126015484
NCBI-ProteinID:
XP_049633966
LinkDB
All DBs
Position
8:complement(566316..576021)
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AA seq
671 aa
AA seq
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MAAAAPAPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEDEDGGGG
GEGGADAARGEPGREDDDDEADEDEVDVDVDAAAAGGGGGWDTPMRDDDYEGDMDEEEEE
EEEEEEDEGAYWAGGDGWGHMDYGWAEEDEEEEEEEEEEEDLDYYLHGMDDELQDDDDEE
PLDEDEDEDDDELPPPPPPPPAPAPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIR
QMHPSPGGRPGRAPEQGVCPKHQEALKLFCEVDEEAICVVCRESRSHKLHSVVPLEEVVQ
EYKAKLQGHVEPLRKHLETVQKLKAKEERRVTQLKSQMKSELAAVASEFGRLTRFLAEEQ
AGLERRLRDMHEAQLGRAGAAASRLSEQAAQLSCLLAEAQERSQQGGLRLLQDIKETFNR
CEEVQLQPPEAWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALLLSP
DRRGVRLAERRQELPDYPKCFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTH
HKEKPGYSGGMSGGGDTSASRHHQHHHHHHYQHHRRRRPHLPPPPLQREVWCVGTHGKRY
QAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHVHTFSAAFLGERVFPFFRV
LSKGTRIKLCP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggcgcccgcgcccaacccggtgcagacgctgcaggaggaggccgtgtgc
gccatctgcctcgactacttcaccgaccccgtgtccatcggctgcggccacaacttctgc
cgcgtgtgcgtgacgcagctgtggggcggcgaggacgaggacgaggacggcggcggcggc
ggcgagggcggcgcggacgcggcgcgcggcgagccgggccgcgaggacgacgacgacgag
gccgacgaggacgaggtggacgtggacgtggacgcggcggcggcgggcggcggcggcggc
tgggacaccccgatgcgcgacgacgactacgagggcgacatggacgaggaggaggaggag
gaggaggaggaggaggaggacgagggcgcctactgggccggcggcgacggctggggccac
atggactacggctgggccgaggaggacgaggaggaggaggaggaggaggaagaggaggag
gacctggactactacctgcacggcatggacgacgagctgcaggacgacgacgacgaggag
ccgctggacgaggacgaggacgaggacgacgacgagctgccgccgccgccgcccccgccg
cccgcgcccgcgccgcccgcgccccgccgctgcttcacctgcccgcagtgccgcaagagc
ttcccgcgccgcagcttccgccccaacctgcagctggccaacatggtgcaggtcatccgc
cagatgcacccgagccccggcggccggcccggccgcgcgcccgagcagggcgtctgcccc
aagcaccaggaggccctcaagctcttctgcgaggtggacgaggaggccatctgcgtcgtg
tgccgcgagtcccgcagccacaagctgcacagcgtggtgccgctcgaggaggtggtgcag
gagtacaaggccaagctgcaggggcatgtggagccgctgaggaagcacttagagacagtg
cagaagctgaaggccaaggaggaacggcgggtgacacagctaaagagccagatgaagtcg
gagctggccgccgtggcctcggagtttgggaggctgaccaggttcctggctgaggagcag
gcagggctggaacgtcgtctccgggacatgcacgaggcccagttggggcgcgccggggca
gctgccagccgtctatcggagcaggcggcccagctgagctgcctgctggcagaggcacag
gagcggagccagcaggggggcctaaggctactccaggacatcaaggagactttcaatagg
tgcgaagaagtgcagctgcagccccccgaggcctggtcccctgacccgtgtcaaccccat
agccatgacttcctgacagatgccatcgtgaggaaaatgagccggatgttctgtcaggca
gcccgagtggacctgacgctggaccccgacactgcccacccagctctgctactgtcccct
gatcgccggggcgtccgcctggccgagcggcggcaggagctgcctgactaccccaagtgc
ttctctgccgactgctgcgtgttgggggcgcagggcttccgctcgggccgccactactgg
gaagtggaggtgggtgggcggcgtggctgggcagtgggtgctgcccgcgagtccactcac
cacaaggagaagccaggatactccgggggcatgtcgggaggtggagacaccagcgcatca
cgccaccaccagcaccaccaccaccaccactaccagcaccaccgccgccgccggcctcac
ctaccaccgccgccgctgcagcgcgaggtgtggtgtgtgggcacccacggcaaacgctac
caggcacagagctccacggagcagacgctgctgagcccaagcgagaagccacggcgcttt
ggggtctacctggactacgaggctggccgcctgggcttctacaacgctgagacgctagct
cacgtgcacaccttttcagcggccttcctgggcgagcgagtcttcccgttcttcagggtg
ctctccaagggcacgcgcatcaagctctgcccgtga
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