Suncus etruscus (white-toothed pygmy shrew): 126015486
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Entry
126015486 CDS
T09902
Symbol
NEIL1
Name
(RefSeq) LOW QUALITY PROTEIN: endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126015486 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
126015486 (NEIL1)
Enzymes [BR:
setr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
126015486 (NEIL1)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
126015486 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
126015486
NCBI-ProteinID:
XP_049633973
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All DBs
Position
1:complement(3402930..3408471)
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AA seq
430 aa
AA seq
DB search
MPEGPELHLASLFVNQACRGLVFGGRVEKSPVSRNPEVPFESSAYRISAAARGKELRLTL
RPLPGAQPAREPLHLVFRFGMSGSFQLVPSDALPRHAHLRFYTAPPESPQALCFVDIRRF
GRWDLSGQWQPGRGPCVLAEYEQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA
EILYRSVGRRGHQGWGGRCVSHDPLLNTASSLLPRCRLRIPPFEKARTVLEALQQRRPSP
ELTLSQKIKAKIQNPDLLELCHSVPKEVVALGGKGYGQELGEDDFAPFRAWLRCYGLSGM
SFLRDRHKRTIWFQGDPGPLAPKGGKSRKKKTKAAQRSLEDTVEGPLSPPPPIGPGKTPA
RPRRSRRGHPEQNGVQQPAEVSPQHAPEEPPVPKKGKKRRGPPSAPPSRAVSAGQRKPRK
IKADTPASAS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggccccgagttgcacctggccagcctcttcgtgaaccaggcgtgccgcggg
ctggtgttcggtgggcgcgtggagaagtcgcccgtcagccgaaaccccgaggtgcccttt
gagagcagcgcctaccgcatctcggccgctgcccgcggcaaggagctgcgcctgaccctg
aggcccctgcccggggcccagcctgctcgcgagccgctgcacctggtcttccgcttcggc
atgtccggctccttccagctggtgcccagcgacgcgctgccccgccacgcccacctgcgc
ttttacacggctcccccggagtccccgcaggccctctgtttcgtggacatccgccgcttt
ggccgctgggacctcagcggccagtggcaaccgggccgtgggccttgtgtcttggcggaa
tatgagcagttcagagagaacgtgttacgaaacctggcggacaaggcctttgaccggccc
atctgtgaggccctcttggaccagcggttcttcaatggcattggcaactatctgagggca
gagatcctgtaccggtcagtaggcaggcgtggacaccagggctggggtgggcggtgtgta
tcccacgatcccctgctgaacacagcctcctctctcctgccccgctgcaggctgagaata
cccccttttgagaaggctcgcacagtcctggaggcactgcagcagcgcaggccgagccca
gaactgaccctgagtcagaagatcaaggccaagatacagaacccagatctgctggagctg
tgtcactcagtgcccaaggaggtggtggcgctggggggcaaaggctatgggcaggagctc
ggggaggacgactttgctcccttccgagcctggctacgctgctatggtctgtcaggcatg
agcttcttgagggaccggcacaagcgtaccatctggttccagggggatcctggacctctg
gcacctaaagggggcaaatcccgaaagaaaaaaaccaaagcagcacagagaagtcttgaa
gacacagtggagggacccttgtctcctccaccacctatcggtcccggcaagacacctgcc
aggccgcgaaggtcacgaagaggccatcctgagcaaaatggagtgcagcagcctgcagag
gtcagccctcagcatgcacctgaagaacccccagtgcctaagaaaggaaaaaagaggagg
gggcctccttctgcacccccttcgagggccgtcagtgcaggccaacgcaagccccgaaag
attaaggctgacacccctgcctcagcctcttag
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