Suncus etruscus (white-toothed pygmy shrew): 126015573
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Entry
126015573 CDS
T09902
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126015573 (SOX1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126015573 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
126015573
NCBI-ProteinID:
XP_049634092
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All DBs
Position
8:complement(123828009..123829127)
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AA seq
372 aa
AA seq
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MYSMMMDADLHSPGGGAQAPTNLSGPAGGVGGAGGGGGGGAKAGQDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKTKTLLKKDKYSLAGGLLAAGAGGGGAAVGMGVGAGAGGVGPRLDSPGGAAGGGYAHVN
GWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHNPQPMA
RYDMGALQYSPLPGSQGYVGAAPSGYGGLPYAAAAAAAGGAHQNSAVAAAAAAAAASSGA
LGALGSLVKSEPSGSPPAPTHSRAPCPGDLREMISMYLPAGEAGDPAQGRLHALPQHYQG
AGVNGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggacgcggacctgcactcgccgggcggcggcgcccaggcgccc
acgaacctgtcgggcccggcgggcggcgtgggcggcgcgggcggcggcggcggcgggggc
gccaaggccggccaggaccgcgtcaagcgccccatgaacgccttcatggtgtggtcgcgc
gggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cggctgggcgccgagtggaaggtgatgtcggaggcggagaagcggccgttcatcgacgag
gccaagcggctgcgcgccctgcacatgaaggagcacccggattacaagtaccggccgcgc
cgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctggcg
gcgggcgcgggcggcggcggcgcggccgtgggcatgggcgtgggcgcgggcgcgggcggc
gtggggccgcggctggacagcccgggcggcgcggcgggcggcggctacgcgcacgtcaac
ggctgggccaacggcgcctacccgggctcggtggccgcggcggcggcggccgcggcgatg
atgcaggaggcgcagctggcctacgggcagcacccgggcgcgggcggcgcgcacccccac
gcgcacccggcgcacccgcacgcccaccacccgcacgcgcacaacccgcagcccatggcc
cgctacgacatgggcgcgctgcagtacagcccgctgcccggctcgcagggctacgtgggc
gccgcgccctcgggctacggggggctgccctacgcggcggccgcggcggcggcgggcggc
gcgcaccagaactcggccgtggcggcggcggcggccgcggccgccgcgtcgtcgggcgcc
ctgggcgcgctcggctcgctcgtcaagtccgagcccagcggcagcccgccggcgcccacg
cactcgcgcgcgccctgccccggggacctgcgcgagatgatcagcatgtacttgccggcc
ggggaggccggggaccccgcgcagggccggctccacgcgctgccgcagcactaccagggc
gcgggcgtcaacggcacggtgccgctgacgcacatctag
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