Suncus etruscus (white-toothed pygmy shrew): 126015590
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Entry
126015590 CDS
T09902
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04140
Autophagy - animal
setr04148
Efferocytosis
setr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126015590 (VPS11)
04148 Efferocytosis
126015590 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126015590 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126015590 (VPS11)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126015590 (VPS11)
Hops complex
126015590 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
zf-HC5HC2H
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
DUF1993
zf-RING-like
zf_RING_Vps8_fungal
DUF5847
DLP_helical
Motif
Other DBs
NCBI-GeneID:
126015590
NCBI-ProteinID:
XP_049634117
LinkDB
All DBs
Position
8:complement(14911030..14926063)
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AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLSNDGATPGAAPVSGPAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHSILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGRDSPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSDFTG
TDSQSSDKQILNIYDLCNKFIAYSATFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSET
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKTLMHHIPEQTTQLLKGLCTNHGLSLEGRSDREALGVRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKESPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTTRLTSNLETGLQRDLLMNLRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcgccgtttcgttttcttcgacaaggagctggtgaaggag
ccgctgagcaacgatggggcgacgcccggcgccgcgcctgtctctgggcccgcagcgtct
aagttcctctgcctccctcccggcatcaccgtctgcgactcgggccgagggagtctcgta
tttggagatatggaaggccagatctggttcttgccccgctctctccagctcacaggcttc
caagcctacaaactacgagtgacacacctgtaccagctgaagcagcacagtatcctggca
tcggttggtgaggatgaagaaggcatcaatcccctggtaaaaatttggaacctggagaag
agagatggtggcaatccgctctgtacacggatctttcctgccatcccaggaacagagcca
acggttgtgtcttgtctgactgtccatgaaaatctcaactttatggccattggttttacc
gatggcagtgtgacattgaacaaaggagacattacccgggacagacatagcaagactcag
atcttgcacaagggtaactaccctgtcactggcctggcttttcgccaagctggaaagacc
actcacctattcgtggtgacaacagagaatgttcagtcctatatagtctctgggagagat
tccccacgtgtggaactggacacgcacggttgcggcctgcgctgctcagccctgagtgac
ccttcccaagacctgcagttcatcgtggccggggacgagtgtgtctatttgtaccagccc
gatgaacggggaccctgtttcgcctttgagggccacaagctcatcgcacactggttcaga
ggctacctggtcattgtttcccgtgaccggaaggtttctcccaagtccgatttcacgggc
actgactcgcagagctcggacaagcagattctcaacatctacgacctgtgcaacaagttc
attgcttatagtgccaccttcgaggatgtggtggacgtgctagccgaatggggttccttg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaaaaacctctttgagatggccattaacctagccaagagccag
cacttggatagcgatggactggcccagatcttcatgcagtatggagaccatctctatagc
aagggcaaccatgatggggctgtgcaacagtatatccgaactatcgggaagttggagcca
tcctacgtgatccgcaagttcctggatgctcagcgcatccacaacctgacggcatatcta
cagaccctgcaccgccagtcgctggctaatgccgaccacaccaccctgctgctcaactgt
tacaccaaactcaaggacagctccaagctggaggagttcatcaagacaaagagtgagact
gaggtccactttgatgtggagacggccatcaaggtcctccggcaggcgggctattactcc
catgccctctacctggcagagaaccatgcccaccatgagtggtacttgaagatccagcta
gaggacatcaagaattaccaggaagcacttcggtacatcggcaagctgccttttgagcag
gccgagagcaacatgaagcgctacggcaagaccctcatgcaccacattcctgagcagacc
acccagctgctgaagggcctctgcaccaaccatggcctcagccttgagggccgcagtgat
cgggaggccctgggtgtcagggccaactctgaggagttcatacccatctttgccaataac
ccacgagagctcaaggccttcttggagcacatgagtgaagtgcagcctgactcaccacag
ggtatctacgacacgctcctggagctgcgtctgcagaactgggcgcacgagaaggatccc
caggtcaaagagaagcttcatgcagaggccatttccctgctcaagagtggccgtttctgc
gacgtctttgacaaagccttggtcctgtgccagatgcacgacttccaggatggggttctg
tacctttatgaacaggggaagctgtttcagcagatcatgcattaccacatgcagcacgag
cagtaccgacaggtgatcgccgtatgcgagcgccatggggaacaggaaccctctttgtgg
gagcaggcgctcagctactttgcccgcaaggaggaagactgcaaggagtacgtagctgcc
gtgcttaagcacatcgagaacaagaacctcatgcctcccctcctagtggtgcagaccctg
gcccacaactccaccgccaccctctcggtaatccgggactacttggtgcagaagctgcag
aagcagagccagcagatcgctcaggacgagcttcgggtgcggcggtaccgggaggagacc
acgcgtatccgccaggagattcaggagctcaaggagagcccaaaaatcttccagaagacc
aagtgcagcatctgtaacagtgccttggagctgccctccgtgcacttcctgtgcggccac
tccttccaccagcactgctttgagagctactcagagagtgacgctgactgccccacctgc
ctcccggagaaccgcaaggtcatggacatgatccgtgcccaggaacagaagcgagacctc
cacgatcagttccagcaccagctcaagtgctccaatgacagcttctcggtgattgctgac
tactttggccgaggggttttcaacaaactgactctgctcaccgacccacccacgaccagg
ctcactagcaacctggagacggggctgcagcgggacctgctcatgaacttgcgcaggggc
acctga
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