Suncus etruscus (white-toothed pygmy shrew): 126015618
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Entry
126015618 CDS
T09902
Symbol
DSCAML1
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAML1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126015618 (DSCAML1)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
DSCAM family
126015618 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Ig_6
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
126015618
NCBI-ProteinID:
XP_049634156
LinkDB
All DBs
Position
8:15867776..16108978
Genome browser
AA seq
2063 aa
AA seq
DB search
MWLVTFLLLLESLQKARPEDAGSTLYFVNASLQHVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFTPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVK
AVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVPITPENRYSLTPRG
GLYISDVQKEDALSTYRCITRHKYSGETRQSNGARLSVTDPAESVPTILDGFHSREVWAG
HTVELPCTASGYPLPAIRWLKDGRPLPADSRWTKRITGLSISDLRAEDSGTYMCEVTNTF
GSAEVTGTLTVVDALHVTLTPKKLKTGIGSTVILSCALMGSPEFSIRWYRNTELLRPDEA
VSIRGLSNETLLIASAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPIERDSSHRTNQYTMSDGTTISHMNVTGPQIRDG
GVYRCTARNSVGRAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLSDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQVLPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKS
MFLTVKIPAMITSHPNTTIAIKGQAKELNCTARGERPIIIRWEKGDTVIDPERTMRYAIA
TKDTGDEVVSTLKLQPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTVSTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSSGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLCVDGEWG
EMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSGVLYIQTKEDVPGPPAGIKAV
PSSASSVVGLLATPKPSPTGSSRKYTIFCSSPWIWPAGXVGRGQPAPSEYETSPEQLFYR
IAHLNRGQQYLLWVAAVTSAGRGNSSDKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPC
NSVGDPAPAVKWTKDSEHLPIPTALAGHRLIHANGTLLLRAVRAEDSGYYTCTATNTGGF
DTIIVNLLVQVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDV
FISSGERAFKLDGLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSRDQHLFTHI
NSTHARLNLQGWNNGGCPITAILLEYRPKGTWAWQGLRANSSGEVFLTELREATWYELRM
RACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFV
IRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDVPRVQLLIEDKEG
IKQLGDDKATIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSSGPLIDMSDIRPGTNPVSR
KNVKSTHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDT
DKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFVSDSSSDQMTTGTNEN
ADSMTSVSTPSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFF
RKGDTHEPCPVVPPREASVRNLPRSTYRPPARHLTLDTASMPLGLPHAGAPAAATTATLP
QRTLAMPAPPTGTAPPAPGPAPTEPPPAPSAAPPAPSTEPPRLGGPHTKMGGSRDSLLEM
STSGVGRSQKQGAGAYSKSYTLV
NT seq
6192 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaactttcctcctgctcctggagtctttgcaaaaagcccgccccgaggat
gccggcagcaccctgtactttgtgaatgcctccctgcagcacgtgaccttctccagctct
gtgggcgtggtggtgccctgtccagctgccggctccccgagtgcggcccttcgatggtac
ctggccacgggggacgacatctacgacgtgccacacattcggcacgtgcacgccaacggc
acgctgcagctctaccccttcaccccgtccgccttcaacagcttcatccacgacaatgac
tacttctgcactgctgagaatgcagccggaaagatccgcagccccaatatccgcgtcaaa
gcagttttcagggagccctacactgtccgagtggaggatcaaaggtcaatgcgtggcaat
gtggctgtcttcaagtgcctcatcccctcctctgtgcaggaatacgtgagcgtggtgtcc
tgggagaaggacacggtccccatcaccccagaaaacaggtattctctcactccccgtggt
gggctgtatatctcggacgtgcagaaggaggatgccctctctacctaccgctgcatcacc
aggcacaagtacagcggggagacccggcagagcaacggggcacgcctctccgtaacagat
cctgccgaatccgtgcccaccattttggacggcttccactcccgagaggtgtgggctggc
cacacagtggagctgccctgcactgcctccggctacccactgccagccatccgctggctc
aaggatggccggcccctcccagccgacagccgctggaccaagcgtatcacaggactgagc
atcagcgacctgcgagctgaggacagtggcacctacatgtgtgaggtcaccaacactttc
ggctctgctgaggtcacgggcaccctgacagtggtcgatgcccttcacgtgaccctaacc
cccaagaagctgaagacaggcattggcagcactgtcatcctctcatgtgcactcatgggt
tccccggagttctccatccgctggtaccgcaacacagagctgctacgacctgatgaggct
gtgtccattcgtgggctcagcaatgagaccctgctcatcgcctccgcccagaagagccac
tccggtgcctatcagtgcttcgccacccgaaaggctcagacagcccaggacttcgccatc
attgtactggaggatggcaccccccgcatcgtctcatccttcagtgaaaaggtggtcaac
cctggggagcaattctcgctaatgtgtgcggcgaagggcgccccacccccaacggtcacc
tgggcgctggacgatgagcccatcgaacgagacagcagccatcgtaccaaccagtacacc
atgtctgacggcaccaccatcagccacatgaacgtcacgggcccccagatccgcgatggc
ggcgtgtaccggtgcacggcgcggaactcggtgggccgtgctgaatatcaggcgcgaata
aacgtaagaggaccccccagcattcgggccatgaggaacatcacggcagtggccgggcgg
gacacgctgatcaactgcagagtcatcggctacccctactactccatcaagtggtacaag
gacgcgctcctgctgcctgacaaccaccggcaagtggtattcgagaatggcacgctgaag
ctgagcgacgtgcagaagggcatggatgagggcgagtacctatgcagcgtgctcatccag
ccccagctctccatcagccagagcgtccatgtggccgtcaaggtgccccctctcatccag
cccttcgagttcccacctgcttccattgggcagctgctctacatcccctgcgtggtgtcg
tcgggggacatgcccatccgcatcacctggaggaaggatggtcaggtcatcatctcaggt
tcgggggtcaccatcgaaagcaaagagtttatgagctccctgcagatttccagcgtctct
ctaaagcacaatggcaactacacatgcattgccagtaatgctgcagccacagtcagccgg
gagcggcagctcattgtgcgcgtgcccccccgatttgtggtgcaacccaacaaccaggat
ggcatctacggcaaggctggggtgctcaactgttcggtggatggctaccccccgcccaag
gtcatgtggaagcacgccaaggggagtggtaacccacagcagtaccacccggtgcccctc
actggccgtattcaggtcctgcccaacagctcactgctcatccgccacgtcctggaagag
gacatcggctactacctctgccaggccagcaacggcgtcggcactgacatcagcaagtct
atgttcctcacagtcaagattccagccatgatcacgtcccaccccaacaccaccatcgcc
atcaagggccaggccaaggagctgaactgcacggcacggggcgaacgacccatcatcatc
cgttgggagaagggggacactgtcatcgaccccgagcgcaccatgcgctatgccatcgcc
accaaggacacgggtgacgaggtggtgtccacactaaagctccaaccggccgaccgaggc
gactctgtgttcttcagctgccatgccatcaactcctacggggaggaccggggtttgatc
caactcactgtgcaagagcccccagaccccccagagctggagatcagggaggtgaaggcc
cggagcatgaacctgcgctggacccagcgttttgatgggaatagcatcatcactggcttc
gacatcgaatacaagaacaagtcagattcctgggacttcaagcagtccacgcgtaacatc
tcccccaccatcaaccaggccaacatcgtggatctgcaccctgcctccgtgtacagcatc
cgcatgtactccttcaacaagattggccgcagcgagccaagcaaggagcttacagtgagc
actgaggaggctgctcctgatgggccccccatggatgtcaccttgcagcctgtaacatca
cagagcatccaggttacctggaaggcccccaagaaggagctgcagaatggtgtgatccgg
ggctaccagatcggctaccgagagaacagcccaggcagcagtgggcagtacagcattgta
gagatgaaggccacaggggacagcgaggtctataccctggacaacctcaagaagttcgcc
cagtatggggtggtagtacaggccttcaaccgggccggcacagggccctcgtccagtgag
atcaacgctaccacactggaggatgtgcccagccaacctcctgagaatgtgcgagcccta
tccatcacctccgacgtggcggtcatctcctggtctgagcccccacgcagcaccctcaat
ggggtcctcaaaggctaccgggtcatcttctggtctctttgcgttgatggagaatggggc
gagatgcagaacatcaccaccacgcgggagcgggtagagctgcggggcatggagaagttc
accaactacagcgtgcaggtcctggcctacacacaggcgggcgatggcgtgcgcagtggg
gtgctctacatccaaaccaaggaagatgttccaggtcctcccgcgggcatcaaagccgtc
ccttcctctgccagcagcgtggtgggtctcctggctacccccaaaccaagcccaacgggg
tcatcccgcaagtacaccatcttctgctccagcccctggatctggccagccgggtaagtg
ggcagaggacagcccgcgcccagtgagtacgagaccagcccggagcagctgttctaccgc
atcgcacacctgaaccgcgggcagcagtacctgctatgggtggctgccgtcacctcggcc
ggcaggggcaacagcagtgacaaggtcaccatcgagcctgctggcaaggccccagccaag
atcatctcgttcgggggcaccgtgacgacgccctggatgagagacgtacggctgccctgc
aactcggtgggtgacccggcgcctgctgtgaagtggaccaaggacagcgagcaccttccc
atcccaacggccctggctggacaccggctcatccatgccaacggcacactgctgctgcgt
gcagtgagagccgaggactcaggctactatacatgcaccgccaccaacactggcggcttt
gacaccatcattgtcaacctcctggtgcaagtccccccagaccagccccgcctcaccgtc
tccaaaacctctgcctcgtccatcaccctgacctggatccctggggacaacggtggcagt
tccatccgtggctttgtgctgcagtactccgtggacaatagcgaggagtggaaggacgtt
ttcatcagttctggtgagcgcgccttcaagctggacggcctcaagtgcggcacctggtac
aaggtgaagctggcggccaagaacagcgtgggatcaggccgcatcagcgagatcatcgag
gccaagacccacggtcgggagccctccttcagccgagaccagcatctcttcacacacatc
aactccacacatgcccgactcaacctacagggctggaacaacggcggctgccccatcacg
gccatcctgctcgagtaccggcccaagggcacctgggcctggcaaggcctgcgtgccaac
agctcaggcgaggtcttcctcacggagctgcgcgaggccacatggtatgagctgcgcatg
agggcctgcaacagcgcaggctgtggcaacgagacggcccagttcgccacgctggactac
gatggcagcaccatcccccccatcaaatctgcccaaggggaaggggatgatgtgaagaag
ctcttcaccattggctgccccgtcatcctggccacactaggggtggctctgctctttgtc
atccgcaagaagaggaaggagaagcgtctgaagagacttcgagatgccaagagtttggca
gagatgctaatcagcaagaacaatcggagctttgacacccctgtgaaggggccgccccag
ggcccacggctgcacatcgatgtcccccgggtccagctgctcattgaggacaaggagggc
atcaagcagctgggggacgacaaggccaccatccctgtgactgatgcggagttcagccaa
gcagtgaacccccaaagtttctgcactggggtgtcgctgcaccacccagccctcatccag
agctcagggcccctcattgacatgtccgacatccggccaggcaccaacccagtgtccagg
aagaatgtaaagtccacacacagtacccggaaccgctactccagccagtggacgctgacc
aagtgccaggcctccacccctgcacgcaccctcacctccgactggaggactgtgggctcc
cagcacggggtgaccgtcactgagagtgacagctacagtgccagcctctcccaggacacg
gacaaaggccgcaacagcatggtgtccacagagagcgcgtcctccacctatgaggagctg
gcacgagcctacgagcacgccaagctggaggagcagctgcagcatgccaagttcgagatc
accgagtgcttcgtctccgacagctcctcagaccagatgaccacgggcaccaacgagaac
gccgacagcatgacgtctgtgagcaccccctctgagccaggcatctgccgcttcaccgcc
tccccgcccaagccccaggacgccgaccgaggcaagaacgtggccgtgcccattcctcac
cgggccaacaagagtgactactgcaacctaccgctctatgccaagtctgaggccttcttc
cgcaagggcgacacgcacgagccgtgccccgtggtgcccccgcgtgaggcctccgtgagg
aacctgccacgctccacctaccggcccccggcccgacacctcaccctggacactgccagc
atgcccctgggcctcccgcacgccggggcacctgcggccgccaccacggccaccttacct
cagaggacactggccatgcccgcgccccccactggcacggctcccccagctcctggtcct
gcccccaccgagccccctcctgcccccagcgccgcccccccagcccccagcaccgagcct
ccacggctggggggtccacacaccaaaatggggggttccagggactctcttcttgagatg
agtacgtcgggggtcgggaggtcacagaagcaaggggctggggcctactctaaatcctac
actctggtgtag
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integrated database retrieval system
