Suncus etruscus (white-toothed pygmy shrew): 126015631
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Entry
126015631 CDS
T09902
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126015631 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126015631 (NFRKB)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
126015631 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
126015631
NCBI-ProteinID:
XP_049634169
LinkDB
All DBs
Position
8:complement(27944510..27970694)
Genome browser
AA seq
1303 aa
AA seq
DB search
MESLDHMLTDPLELGPCGDGHGSRIMEDCLLGNTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDAQREHLQQFLPHFPEEGLGQQDQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLSSQQQYFHRLLKQILASRTDLLDMARRSGQALSLRHKRPSLSRA
PEVREWRAQQRYLKVLREVKEECGDTALSSDEEATLDLQENFSFEDLGSWLPSSPACSPS
PSVPLRVVPTLSTTDMKTADKIELGDSDLKMMLKKHHEKRKRQPDHPDLLTGDLTLSDIM
ARVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKMIKSEAEDLAEPLRAPEGLVPLSP
TPSPLAIPTIKEEPPEDLKPSPLGINEISSSFFSLLLEILLLEGQASLPLLEERVLDWQS
SPASSLNSWFSAAPHWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWRLLGQSPEN
EKELTVLFQLWLETKDQAFCKQENEDSSDTTAPIPRERTDYVVRPSTGDEKRVFQEQERH
RYAQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAA
ARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLW
IYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKASSKESVGKGLGCSPAEQSQ
LSLSDSSMPPTPVTPVAPTPPALPTTPISPPPMAATSKSCSVPEPAKSSSSVLLVSSPPM
QQLGPMLSPTASQTSPAAQTTARVIGHSGPAGLPQVRVVTQPSLPTTPQPSTGPTQAMPQ
MSPGPQIRAPTATTAQTKVVPQTVMATVPVKSPAVAASGQRPGLTVTSLPAATTSPTSKP
ATSGPGTSAPSTSTAAVIQNVTGQNIIKQVAITGQLGVKAPAGSNIPLAATNFRIQGKDV
LRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTVGKGISATLHV
HPAESPAKAGSASAPPSTSTGTTVVKVTPDLKPADSPSSALRLMPALGVSVAEQKGKNTV
AATSDPKPAATIRIVQGLGVVPPKAGQTITVAAHTKPGSSVAGASGTVHTSAVSLPSINA
TMSKTVAVASGTANTPISIGPGAPTVRQVPVSTTVVSTSQTGKLPTRITVPLSVISQPMK
GKSVVTAPLIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQA
TQVRIQTVPAAHLQQGTAASSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggagtccctggatcacatgctgacagaccccctggagctgggtccctgtggcgacggc
catggtagccgcatcatggaagactgtctgctggggaacacacgggtcagcctgcccgag
gacctcctggaggatcctgagatattcttcgacgtggtcagtctatccacatggcaagag
gtcttaagtgacgctcaacgagagcaccttcagcagtttctgccacactttcctgaggag
ggtcttgggcagcaggaccagctcatcctggcgctcttcagcggggagaacttccgcttt
gggaacccactgcacattgcccagaagctctttcgagatggacattttaaccctgaggtg
gtcaagtatcggcagctgtgcttcaagtcccagtacaagcgctacctctcctcacagcag
cagtatttccatcggctgttgaagcagatcctggcctcgaggactgacctcctggacatg
gcgcggcgcagtggccaggctctgtccctgcgccacaaacgcccatcgctgtcgcgtgcc
cccgaggtgcgagagtggcgtgcccagcagcgctacctgaaggtgctgagggaggtgaag
gaggagtgtggggacaccgccctgtcgtcggatgaggaggccacgttggatttacaagaa
aacttttcttttgaagatctcggctcatggcttcccagctccccagcgtgttctcctagc
ccttcggtgcccctgcgggtggtgcccacactctccaccacggacatgaaaactgcagat
aaaattgaactgggggacagtgacctgaagatgatgctgaagaagcaccatgagaagcgg
aaacgccagccagaccacccggaccttttgacaggggatctgaccctcagtgacatcatg
gctcgggtcaatgctggcaggaagggctctcttgcagctctgtatgacttggctgtcctg
aaaaagaaggtgaaggaaaaggaggaaaagaagaagaagaaaataaaaatgatcaagtca
gaagctgaggacctggctgagcccctccgggccccggaggggctggtcccgctgtctcca
acgccctctcccttggccatcccgaccatcaaggaggagcctcctgaagatctcaagcct
tccccccttggaatcaatgaaatctcctctagttttttctcccttctcttggagatcttg
ctgctagaggggcaagccagcctccccctgctggaggagcgggttctggattggcagtca
tctccagctagttctctcaacagctggttttctgcagcccctcactgggccgagctggta
ctacctgctctgcaatatcttgctggagaaagccgggctgtaccatccagtttctctccc
tttgttgaattcaaggagaaaacccagcagtggagattgcttggccagtctccggagaat
gagaaggagctcacagttctcttccagctttggcttgaaaccaaagaccaggctttctgc
aagcaggaaaatgaggacagttccgacaccacggcccccatcccccgggaaaggactgac
tacgtggtgcggcctagcactggtgacgagaagcgggttttccaggagcaggagcggcac
cgctacgcgcagcctcacaaggccttcacattccgcatgcacggctttgagtcagtggtg
gggcccgtgaagggcgtgtttgacaaggagacttcactcaacaaggcacgggagcactcg
ctgctgcgctcggaccggccggcctatgtcaccattctgtctctggttcgggacgctgct
gcacggctgccgaatggtgagggcacccgggcagagatctgtgagctgctcaaggactcc
cagtttctggcccctgatgtcaccagcactcaggtgaacacggtggtgagcggcgctctg
gatcggctccattatgagaaggacccatgcgtcaagtacgacattggccgcaagctctgg
atctacctgcaccgagaccggagtgaggaagagtttgagcggatccatcaggcccaggct
gctgctgccaaagccaggaaagcccttcagcagaagcccaagcccccgtccaaggtgaag
gccagcagcaaagagagtgtcgggaagggcctgggctgcagtccagctgagcagagccag
ctaagcctcagtgactccagcatgccccccactccagtcacccctgtggcccccaccccg
cctgctcttcccactactcccatttcccctccgcccatggcagccaccagcaagagctgc
tctgttccggagcctgccaagtccagttcaagcgttctcctggtatcctcgccgcccatg
cagcagctcggacccatgctgtccccaacggccagccagacctcacccgctgcacagacc
acggctcgtgtcattggtcactctggtccagccgggcttccccaggtacgcgtggtgacc
cagcccagcctccccaccaccccgcagccctcaacaggacccacacaggcaatgccgcag
atgagccctgggccccagatccgagcacccactgccaccactgcacagaccaaagtcgtc
ccccagacagtcatggctacggttcctgtcaaatctccggcagtagctgccagtgggcag
cggcctggcctcacagtgacaagtctccctgccgccaccactagccccaccagcaagcct
gccacgagtgggcctgggacctctgcacccagcacatccacggcagcagttattcagaat
gtcacgggccagaacatcatcaagcaggtggcaatcaccgggcagcttggtgtgaaggcc
ccggcgggcagcaacatcccgctagcagccactaacttccgcatccagggtaaggacgtg
ttgcgtctgccgccctcttccatcaccaccgacgccaaaggccagacagttctacgaatc
actccggacatgatggccacgctggctaagtcccaggtcaccacagtcaaactgacccag
gacctcttcgggacaggaagtggcactgtgggcaaaggcatctctgccaccctgcacgtc
cacccagcagagagccctgccaaggccggttcagccagcgcccctccatccacttcaaca
ggtaccaccgtggtcaaggtgacgcctgacctcaagcctgcagactccccgagctccgcc
ctccgcctgatgcctgcccttggtgtaagtgtggcagagcagaaggggaaaaacacggtg
gctgccacttcggaccccaagcctgctgctaccatccgcattgtgcagggcctgggcgtg
gtgccccccaaagcaggccagaccatcacggtggccgcccacaccaagccaggttcatct
gtggccggcgcttctggaactgtgcatacctcagccgtgtccttgcccagcatcaatgcc
actatgtccaagactgtggccgtagcatctgggacagccaacactcccatcagcattggg
ccaggagcccccacagttcggcaggtccctgtcagcaccacagtcgtgtccacgtcccag
actgggaagctgccaacgcggatcactgtgcctctctctgtcatcagccaacccatgaag
ggcaagagcgtggtcactgcccccctcatcaagggcaaccttggtgccaacctcagtggg
ctgggccgaaacatcatcctcaccaccatgcctgcgggcaccaagcttatcgccggcaac
aagcctgtcagcttcctcactgcccagcagctgcagcagctccagcaacaaggccaggcc
actcaggtacggatccagacggtaccggcggcccaccttcagcagggcacggcagccagc
tcctccaaagccgtatccactgtggtggtgaccacagccccatcccccaaacaggcaccc
gagcagcagtga
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