Suncus etruscus (white-toothed pygmy shrew): 126015752
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Entry
126015752 CDS
T09902
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126015752 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126015752 (PAN3)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126015752 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
126015752 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Pkinase
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
126015752
NCBI-ProteinID:
XP_049634304
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Position
8:43289185..43440546
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AA seq
878 aa
AA seq
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MNSGGGLPPPPAAASTPCPPSAASLAAAVAAGAPPGAVGAGVAGAPAAGVKLKFCRYYAK
DKTCFYGEECQFLHDDPGLGLPGNSVPLALAVAPAGGAGPPPPPAKKPEPLGVPAAAAAG
GGGGAGILEGPRLAIPGIDGGALSDTSLTDSYFSTSFIGVNGFGSPVESKYPLIQRMTNS
NSSPSLLNDSAKPYAGHDSLTSPASSLFNDFGALNISQRRKPRKYRLGILEERLVPMGSK
ARKAKNPIGCLADRCKSGVPNSMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVSQS
NMSAFSQVFCHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANY
MVPSSASTPVNNPVSQTPSSGHVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAP
HIAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYHSLFPLEPLP
PPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIV
TLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHDGPLPRQHA
GLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFDVLTFDN
SQNNNPLAIMAQYQQADLISLGKVVLALACNSLAGIQRENLQKVMELVTINYSSDLKNLI
LYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLSKEVQNGRLFRLLAKLGT
INERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEK
ISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgccccctccggccgccgcctccaccccgtgcccgccg
tcggcggcgtcgctggcggcggccgtggccgcgggggccccgccgggggcggtgggcgcg
ggggtggccggcgcgccggcggcgggcgtgaagctcaagttctgccgctactacgccaag
gacaagacgtgcttctacggcgaggagtgccagttcctgcacgacgacccgggcctcggc
ctccccggcaacagcgtccccctggcgctggccgtggcgcccgccggcggggccgggccg
ccccctccgccagccaagaagcccgagcccctgggcgtccccgcagcggcggcggccggc
ggcggcggcggcgccgggatcctggagggcccgcggctggcgattcctggaatagatgga
ggtgctttaagtgatacaagtctcacagattcctattttagtaccagctttattggagtc
aatggatttggaagccctgtagaatcaaagtatcccctgatacagagaatgactaatagt
aacagctccccaagtcttctaaatgatagtgccaaaccatatgcaggccatgattctcta
acttcacctgcttcatccttgtttaatgactttggtgccctcaacatctctcagagaaga
aagccaaggaagtatcgcctggggatcctggaggagaggctagttccgatgggatcaaag
gcacgaaaagcaaagaaccctattggctgccttgccgacaggtgtaaatcaggagtaccc
aacagtatggtttggtggaacagagtcactgaaaacaatttacagacaccaaatcctact
gcaagcgagtttattcctaaaggaggatcaacctccaggctgagtaacgtgtcccagtca
aatatgtctgctttctctcaagttttctgtcacccatcaatgggaagtcctgctaccgct
ggattagctccaggaatgtcattgtctgctggatcttcccctcttcattctcccaagatc
actccacatacttcccctgctcctagaagaagaagtcacactccgaatccagcaaattac
atggtgccttctagtgcctctacaccggttaacaatcctgtttctcagactccatcttct
ggtcatgtgatccagaaggaaactgttggtgggacaacttacttttatactgacacaact
ccagcacctttgactggaatggtatttccaaattaccatatttatcctccaactgcacct
catattgcttacatgcaaccaaaagcaaatgctccttccttcttcatggctgatgaactc
agacaggagctgatcaacagacatttaataacaatggctcaaattgatcaagcagatatg
ccagcagttcctgcagaagttgacagctaccatagcctgttccctctagaaccactgcca
cctcctaaccggatacagaaatcaagtaattttggatatattacatcttgctacaaagct
gtaaatagcaaagatgatctgccatattgccttcggaggatacatggttttcgtcttgtt
aacacaaagtgcatggtattagttgatatgtggaaaaaaattcagcactcaaacattgta
accttgcgtgaagtatttaccactaaagcatttgcagagccttctcttgtgtttgcatat
gatttccatgctggaggagaaaccatgatgagcagacactttaatgaccctaatgctgat
gcttatttcacaaagagaaagtggggccaacatgatggaccattgcccagacaacatgct
ggattattgccagaatctctcatttgggcttatattgtccagctgagttctgctttgcgg
actattcatacagctggtttggcatgtcgagttatggacccaacaaagattctgataact
ggtaaaacgaggttacgagtaaattgtgttggagtttttgatgttttaacatttgataac
agtcaaaataataatccattggcgataatggctcagtaccagcaagcagatctgatatca
ttaggaaaagttgtcttggctttggcttgcaactctttggcaggaattcagcgagaaaat
ttacagaaagtcatggaactggtgacaatcaactattcctctgacctgaagaacctgatt
ctgtatttattgacggaccaaaacaggatgcggagtgtaaatgacatcatgcctatgatt
ggtgctcgattttatactcaattggatgctgctcaaatgagaaatgatgttatagaggaa
gatctttcaaaggaagttcaaaatggaagactgtttaggcttctagcaaaattgggaaca
atcaatgagaggccggagtttcagaaggaccctacctggtcagagactggagaccgttat
ctgttgaaactctttagagaccatctttttcatcaggtgactgaagcaggtgctccttgg
attgacctcagtcatatcatttcttgtcttaacaagttagatgctggtgtgccagaaaaa
ataagcctcatatccagagatgagaagagtgtacttgtggtgacttacagtgacttaaag
cgctgctttgaaaatacttttcaagaactgattgcagctgcaaatggtcagttgtag
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