Suncus etruscus (white-toothed pygmy shrew): 126015910
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Entry
126015910 CDS
T09902
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
126015910 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126015910 (SPATA13)
Membrane trafficking [BR:
setr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
126015910 (SPATA13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
126015910
NCBI-ProteinID:
XP_049634410
LinkDB
All DBs
Position
8:complement(39059173..39139171)
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AA seq
1297 aa
AA seq
DB search
MNEGEPGSGVPTRKPSAPEKQEAQALPRAKEPEPDALSTGPASQVAAPPKNDGGDDRSGH
SGRAPTDVHAGLSGTAAGRATMSTAPHSGGGPGAVPTCEKGGFFENGATGAREAARPSAA
KLLRLLSGSRPRPAGPERPRSVVLVRSASTWTALASLRKAGSFKRLKASVLQGIQSREGA
REARESASEPEPPKPVHNGAPRTTPQGRGPSPGRAGASDGSDPEEAADDAFQRSTHRSRS
LRRAYGLGRIRLLDADTQQQQQQQPSIQDPPPGLGLGRGPTSCRGGEGTLRRSRSTDNPR
SPTQSSCKRKFASSLAELKVLRDQPLSARTLSSSSADSERSGGSERSTKRWKSPIRARDF
DRVLKLVSGAADAAWRREVSGEPEPKTRPRSALHDDYSRRVSACSEKPLRRGRSVSMHSM
HATEEFEAAPKVDADTAVFPLEPTNPVVDPSADSTVSSPAVEEGHSEPLDTRNPGVLSPV
DSEQLLMPPRPATPKPLSPQSPGAGGAGIFRNLSTRSLNLVDRDARTQGPAQRDHRPASV
QCLEPSNSDDCNLDGIANSHILLSAKEEKKEVVVAEEHCRQSPSQEEDTTETLRTSQRRW
GSGRRTRPRPLSDYGHLTSRSLSIPEDSIVGDPQQKTTVNSVPQPSMASLDPAEQSAVVG
CPRGGRRRRPISVIGGVSFYGHRRTEEVENLLTQPAARPPVPAHQVPPYKAVSARFRPFS
FSQSTPIGLDRVGRRRQMRASNISSEGGTESSALVDDNGSEEDDSYEDLRQGNHRFLPPG
GEQLAVNELISDGSVVFAEALWDHVTMEDQELGFKAGDVIQVLEASNKDWWWGRNEDKEA
WFPASFVRLRVNQEELSENSVSSQGEEQEAGGKSHHVHPESKRQMRANVVQEIMNTERVY
IKHLRDICEGYIRQCRKHTGMFTVAQLAIIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLS
EIGSCFLQHQEGFAVYSEYCNNHPRACSELAGLMKQGRYRHFFEACRLLQQMIDIAIDGF
LLTPVQKICKYPLQLAELLKYTPQEHSDYSNIKAAYEAMKKVACLINERKRKLESIDKIA
RWQVSIVGWEGLDILDRSSELIHSGELTRITKQGKNQQRTFFLFDHQLVSCKKDVLRRDM
LYYRGRTDMDQMQLVNLEDGRDKDWNLSVKNAFKLVSKTTEEAHLFCARKPEDKARWLQA
CEDERRRVQEDQEMGMEISENQKKLAMLNAQKAGHGKSKGYGRCPAAPPHQNLHPLQQRH
FTVPPSVPQQQVFALAEPRRKPSLLWLSLSKLTPFRK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagggtgaaccgggttcaggagttccaacacgtaagccttccgcccctgagaag
caggaagctcaggccctgccccgcgccaaggagccggagccggatgcgctcagcaccggg
cctgcgagccaagtggctgcgcccccgaagaacgacggtggcgacgaccgaagtggacac
tcggggcgggcgcccaccgacgtccatgcgggcttgagcggcacagcagcgggccgggcg
accatgagcacagccccgcatagcggcggcggccccggggccgtccccacgtgcgagaaa
ggaggcttctttgagaatggggcaactggtgcccgggaggcggccaggcctagcgcggcc
aagctccttcgcctgctgtccgggagccgccccaggccggccggccccgagaggccccgc
tcggtggtcctggtgcggagcgcctccacctggactgcgctcgcctccctccgcaaggcg
ggatccttcaaaaggctcaaggcctcggtcctgcagggcatccagagccgagagggagcg
cgtgaggcccgggagagcgcctctgagcccgagccgccaaagccggtgcacaacggtgcc
ccccggaccaccccgcagggtcggggtccttcccctgggcgggcgggcgcctccgatggc
tcggaccccgaggaggcagccgacgatgccttccagcgcagcacacatcgctcccgcagc
ctgcgccgcgcctatggcctgggccggatccgcctcctggacgctgacacgcagcagcag
cagcagcaacagcccagcatccaggaccccccgcctggcctgggactgggccgaggcccc
acgagctgcagaggcggcgaaggcaccctgaggaggagcaggagcaccgacaacccccgc
tcccccacgcagagttcctgcaagcgcaaattcgcctccagcctggctgaactcaaggtg
ctgcgggaccagcctctctctgccaggacgctgagcagctcctcggcggattccgagcgc
tctgggggctccgagagaagcaccaagcgttggaagagccccattagggctcgagatttc
gaccgggtgctgaagctcgtgagcggcgcggctgatgcggcctggcgaagggaggtgtcc
ggggagcccgagccgaagacccgaccccgcagcgcgctgcacgatgactactcgcgccgg
gtgtctgcgtgcagcgagaagcctttgcgcaggggacgctcagtgtccatgcacagcatg
catgcaaccgaggaattcgaagctgcacccaaggtggatgcagacacggcggtgtttccc
cttgaacccacaaaccccgtggtggatccaagcgctgatagtactgtctccagtccagct
gtagaagaaggacacagtgaacccttggatacccggaatccaggagtcctctctccagtc
gactctgaacagctgctcatgcctcccaggcccgctacacccaagcccctaagtcctcag
agcccaggtgcaggcggtgctgggattttccgcaatctcagcacaaggtccctgaacttg
gttgacagggacgctagaacacaggggcctgcccagcgggaccacagacctgcgtctgtc
cagtgtctagagcccagcaatagtgacgactgcaacctagatggtatcgccaacagccac
atccttctaagtgccaaagaggaaaagaaagaagtggttgtagctgaggaacactgcagg
cagagcccatcacaagaggaggacaccacagagactctgaggaccagccagcggagatgg
ggttctgggagaagaaccaggcctcggccactctctgactatggccacttgaccagccga
agtttgtctattcctgaagactccattgttggagacccacaacaaaagaccactgtgaat
agcgtcccacagcccagtatggcttccttggaccctgcagagcagagtgctgttgtgggc
tgccccagaggaggccggagaagacgcccgatctctgtgataggtggggtcagtttctat
ggccacaggcggactgaagaagtagagaatcttctaactcaaccagcagccaggccgccg
gtgcccgctcaccaggtgcccccctacaaagcggtctcagcccgcttccggccattcagc
ttctcccagagcaccccgattgggctggaccgagtgggacggcggcggcagatgcgtgca
tccaacatttcttcagaaggaggcactgagtcctctgccctagtggatgacaatggcagt
gaggaggatgacagctatgaagaccttcgacagggcaatcaccgattcttgccaccaggc
ggggaacagctggcagtcaatgagctgatcagtgatggcagcgtggtcttcgcagaagcc
ctctgggaccatgtaaccatggaggaccaggaactgggcttcaaggcaggagatgtcatc
caggttctggaagcttctaacaaggactggtggtggggccggaatgaggacaaggaggcc
tggtttcctgccagcttcgtcagattgcgtgtcaaccaggaggagctgtcagagaactca
gtcagttcccagggtgaagagcaggaggctggtggcaagtcccaccatgtgcatcccgag
agcaagcggcagatgcgggccaatgtggtgcaggagatcatgaatactgagcgtgtatac
atcaagcacctcagggacatctgcgagggttatattcgacagtgtcgcaagcacacggga
atgttcactgtggcacagttagccatcatttttggaaacatcgaagatatttacaagttc
cagagaaagtttctgaaagaccttgagaaacagtacaataaagaggagcctcatttgagt
gaaataggatcctgcttcctgcagcatcaagagggcttcgccgtctactctgaatactgc
aacaaccacccccgagcctgctccgaactggctggactcatgaaacagggccgctaccga
cacttttttgaggcctgccgcctgctccagcaaatgattgacatcgctatcgatggcttc
ctgctcacgcctgtgcagaagatatgcaagtacccactacagctagctgagctgctcaaa
tacacaccacaggaacacagtgattacagcaatataaaggcagcatacgaggccatgaag
aaagtagcctgtctgatcaatgagcgcaaacgcaagctggaaagtatagacaagattgca
cgatggcaggtgtccattgtgggctgggaggggctggatatcctagaccgaagctcagaa
ttgatccactcaggggagttaaccagaatcaccaagcaaggcaagaaccagcagcggact
ttttttctgtttgaccaccagctggtgtcatgcaagaaggatgtgctgcgcagagacatg
ctttattaccgaggccgcactgacatggaccagatgcagctggtgaacctggaggatggg
cgtgacaaggactggaacctcagtgtgaaaaatgcattcaagcttgtcagcaaaaccacc
gaggaggcacatctattctgtgccaggaagccagaagacaaggcccggtggctgcaggcc
tgtgaggatgagcggaggagggtgcaggaggaccaggagatgggaatggaaatttcggaa
aaccaaaagaaactggcaatgttgaatgctcagaaggcaggacatggcaagtctaaaggt
tatgggagatgcccggcagcccctccacaccagaacctgcacccgctgcagcagcgccac
ttcacggtgccacccagtgtaccccagcagcaggtctttgccttggctgaaccccgaagg
aaaccatcattgctctggctcagtttaagcaaactcacgcccttccggaagtga
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