Suncus etruscus (white-toothed pygmy shrew): 126016068
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Entry
126016068 CDS
T09902
Symbol
SIN3A
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04350
TGF-beta signaling pathway
setr04919
Thyroid hormone signaling pathway
setr05016
Huntington disease
setr05169
Epstein-Barr virus infection
setr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126016068 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
126016068 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
126016068 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
126016068 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
126016068 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126016068 (SIN3A)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126016068 (SIN3A)
REST complex
126016068 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
126016068 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
126016068
NCBI-ProteinID:
XP_049634555
LinkDB
All DBs
Position
1:3335870..3389636
Genome browser
AA seq
1275 aa
AA seq
DB search
MKRRLDDQESPVYATQQRRIPGSTETFPHQHRVLAPAPAVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPTIAAVHSSHHHPTAVQPHGGQVVQGHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSTPAPAQ
PAPQPPPAKASKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGTTPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRKVQR
PMKIFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFXNFLGYKESVHLETFPKERA
TEGIAMEIDYASCKRLGSSYRALPKEYQQPKCNGRTPLCKEVFKXHLVSFPSWSEDSTFV
SSKKTQMKEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLG
GTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWR
EQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLS
LAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEE
EEEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRL
HQILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDY
YPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICV
QVTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLT
IELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLARKPVFLPRNLRRIRKCQR
GREQQEKEGKEGNSKKTMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQS
HERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVS
INKYRVKYGTVFKAP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggagtcaccggtgtatgcaacccagcagcgtcggatc
cctggcagcacagaaacttttcctcaccagcatcgggtgcttgcccctgcccctgctgta
tatgaagcagtatctgagaccatgcagtcagccacaggcattcagtactctgtgacaccc
agctatcaggtttcagctgtgccacagagctccggcagtcatgggcctaccatagcagca
gtgcatagcagccatcatcacccgacagctgtacagccccatggaggccaggtggtccag
ggtcatgctcatccggccccaccagttgcaccagtgcagggacagcagcagtttcagagg
ctcaaggtggaggacgcactgtcctatcttgaccaggtgaagctgcagtttggtagtcaa
cctcaggtctacaatgatttccttgacatcatgaaggaatttaaatcccagagcattgac
actccaggagtgattagtcgagtctctcagctatttaaaggccatcctgacttgattatg
ggcttcaataccttcttgccccctggctacaagattgaggtgcagactaatgacatggtg
aatgtgacaactcctggacaagttcatcagatccccacccatggcatccaaccccagcct
caaccaccaccccagcatccttcacagccttcagctcagtcaaccccagctcctgcccag
ccagctcctcagcccccacctgccaaagccagtaagccttcccaactacaagcacatact
ccagccagtcagcagactcctccgctcccaccatatgcatcccctcgttctccacctgtc
cagcctcatacaccagtgacaatctcattgggaacagccccatccttgcaaaacaatcag
cctgtggagtttaatcatgctatcaactatgttaataaaattaagaacagattccagggc
cagccagacatctacaaagcattcctggagattttgcacacctatcagaaagaacagcgg
aatgccaaggaagctggaggaaactatactccagcattgactgagcaggaggtgtatgcc
caggtggctcgtctctttaaaaatcaggaagatctgttatcagagtttggacagtttcta
ccagatgccaacagctctgtgcttttaagcaaaacaactgccgagaaggttgattctgtg
agaaatgaccatggaggtacagtaaagaagcctcaacttaacaataagccacagaggcct
agccagaatggctgccagattcgcagacactcgggaactggaaccactccaccggtaaag
aagaaacccaaattgcttagcctaaaggactcttcaatggcagacgccagcaagcatggt
gtaggaacggaatcattattttttgataaggttcgaaaggctctgcgaaaggtacagagg
cctatgaaaatttttctgcgctgtcttgtgatctttaaccaggaagtaatttctcgggct
gaacttgtgcagctagtttctccttttctgggaaaatttcctgaattgttcaattggttt
naaaactttctgggttataaggaatctgtgcatctggaaacctttccaaaggaacgagcc
acagaaggcattgccatggagattgactatgcctcttgtaaacggttgggctccagctat
cgagccttgccaaaggagtaccagcagcccaagtgtaacggacggactcctctctgtaaa
gaggtttttaaatgacacctggtctccttcccttcctggtctgaggactctacctttgtt
agttccaagaagacacagatgaaagaacatatctaccgttgtgaagatgagcgctttgag
cttgatgtagttttagagacaaatctggcaacaatccgggttttggaagcaatacagaag
aaactttctcggttatctgctgaggagcaagccaaatttcgtttggataacacccttggg
ggcacatcagaagtcattcaccgaaaagcactccaaaggatatatgccgacaaagcagca
gacatcattgatggactaaggaagaacccctccattgctgttccaattgttctcaaaagg
ttgaagatgaaagaggaagaatggcgagaagctcagagaggctttaacaaggtgtggaga
gagcaaaatgaaaagtactacttgaagtctctggaccaccagggaatcaactttaagcag
aatgacaccaaggtcttgaggtctaagagcttactcaatgagattgagagtatttatgat
gagagacaagagcaggctactgaagagaatgctggtgtacctgttggcccacacctttca
cttgcctatgaagacaaacagatcctggaagatgctgctgcactgattattcaccatgtg
aaaaggcagacagggattcagaaagaggacaagtataagatcaagcagatcatgcatcat
ttcattccagatcttctctttgctcagagaggtgatctttcagatgtggaagaggaagag
gaggaagagatggatgtagatgaagccacaggagctgcaaaaaagcacaatggtgttggg
ggaagtccccctaaatcaaagctactctttagtaacacagcagctcagaagttaagagga
atggatgaagtatacaacctcttctatgtcaataacaactggtacatttttatgcgattg
caccagattctgtgcttaaggctactgcgaatttgttcacaagctgaacggcaaatcgaa
gaagaaaacagagagagagagtgggaacgggaagtgttgggcatcaaacgagacaagagt
gacagccctgcaatccagctgcgactcaaagaacctatggatgttgatgttgaagattat
tacccagccttcctggacatggtgcgcagcttgttggatggcaacattgactcatcacag
tatgaagattctctgagagaaatgttcaccattcatgcctacattgccttcaccatggac
aaacttatccagagcattgtcagacagcttcagcacatcgtgagtgatgagatctgtgtg
caggtgactgacctttacctggctgaaaacaataatggggccaccggaggccagctcaac
acacagacctcaaggagtcttctcgagtcaacatatcagagaaaggctgaacaactcatg
tctgatgagaattgctttaagcttatgttcatccagagccaagggcaggttcagctgacc
attgaacttttggacacagaggaggagaattctgatgaccctgtggaagcagagcggtgg
tcggattatgtggagcgatatatgaattctgatactacctctcctgaacttcgtgagcat
ctggcccggaaaccagtatttctccccagaaacctgcggcggatccgaaagtgtcagcgt
ggtcgtgaacagcaggaaaaagaaggtaaagaaggaaatagcaagaagaccatggaaaat
gttgacagcctagataagttggagtgtagattcaaactcaactcctacaagatggtgtat
gtgatcaagtcagaagactacatgtatcggagaactgccttgctccgtgctcatcagtcc
catgagcgtgtgagcaagcggttacatcagaggttccaagcctgggtagataaatggacc
aaggagcatgtgccacgtgaaatggcagcagagaccagcaagtggctcatgggtgagggg
cttgagggactggtgccatgtaccaccacttgtgacacagagaccctacactttgtgagc
attaacaagtaccgtgtcaaatacggcactgtgttcaaagccccataa
DBGET
integrated database retrieval system
