Suncus etruscus (white-toothed pygmy shrew): 126016195
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Entry
126016195 CDS
T09902
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126016195 (PCDH8)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Protocadherins
126016195 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
126016195
NCBI-ProteinID:
XP_049634715
LinkDB
All DBs
Position
8:complement(71219732..71224513)
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AA seq
1077 aa
AA seq
DB search
MSLAKRRGSPCLLPLQLFSLCWVLSVAQSKTVRYSTFEEEAPGTVIGTLSEDLHMKVSGD
TSFRLMKQFNSSLIRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRSQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQATYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFSFGARTPPEARRLFRLD
PRSGRLTLAGQVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPGGASPFAAAAAAAAALGGADAASSAGPGTLEAGAVSLVPEGAARESLVALVSTSD
KDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAAALDRERISEYNLTLVAEDRGTPPLR
TVRPYTVRVGDENDNAPVFTRPLYEVSVRENNPPGAYLATVVARDPDVGRNGQVTYRLLE
AEVGRSGDAVSTYVSVDPATGAIYALRSFDFETLRQLDVRIQASDGGSPQLSSSALVQVR
VLDQNDHAPVLVHPVPANGSLEVAVPGRTAKDTAVARVQARDADEGANGELAFDLLQQEP
REVFAVGRHTGEIVLTGDLSQEPPGRVFQALLVISDGGRPPLSTTATVSFVVTEGGGRGP
VATAAGSGAGSPERSRPPGSRLAASGPALQWDTPLIVIIVLAGSCTLLLAAIIAIATTCN
RRKKEVRKGGPCREERPGAAGGGASVPGSPEEAGGRGTGPRPNMFDVLTFPGSAKAPFGS
PAADAPPPPTVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGAAPGFGKEPAPPV
AVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTA
ECKILGHSDRCWSPSCGGPNVHPPPHPPAQMSTFCKSTSLPRDPLRRDNFYQAQLPKTVG
LQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPARYLSPKKEADENV
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgagtctagccaagcgcagaggcagcccctgccttctccccttgcagctcttcagcctc
tgctgggtgctctcggtggcccagagcaagacggttcggtacagcaccttcgaggaggag
gcgcccggcacggtcatcgggacgctgtccgaggacctgcatatgaaagtgtccggagac
accagcttccgcctgatgaagcaattcaacagctcgctgatccgggtgcgcgagggggac
gggcagctgaccgtcggggacgcgggcctggaccgtgaacggctgtgtggccaggccccg
cagtgcgtgctggccttcgacgtggtcagcttctcccaggagcagttccgactggtgcac
gtggaggtggaggtgagagacgtcaacgaccacgcgccgcgcttcccccgctcgcagatc
cccgtcgaggtgtccgagggcgcggccgtgggcacgcgcatccccctggaggtgcccgtg
gacgaggacgtgggcgccaatggcttgcagagcgtgcgcctggccgagccgcacagccct
ttccgcgtggagctgcagacgcgcgcggacggtgcccagtgcgccgacctggtgctgctg
caggaactggaccgcgagagtcaggccacctacagcctggagctggtggcccaggacggc
ggccgcccgccacgctccgccaccgccgcgctcagcgtgcgagtgctggacgccaacgac
cacagcccggccttcccgcagggcgccgtggccgaagtggagctggcggaggacgcgccc
gtgggctcgctgctgctggacctggacgcggccgaccccgacgagggtcccaacggggac
gtggtgttctcctttggggcccgcaccccgcccgaggcgcgccgcctctttcgcctcgac
ccgcgctccggacgcctcaccctggccggccaagtggactacgagcgccaggacacctac
gagctggacgtgcgggcccaggatcgcggcccgggaccccgagccgccacctgcaaggtg
atcgtgcgcatccgagacgtcaacgacaacgcgcccgacatcgctatcaccccactggcc
gccccgggtgcgcccggcggcgcctcgccctttgccgcggctgcagcggcggccgcggct
ctcggaggggcggacgccgcgtcgtcggccgggcctgggaccctcgaggctggggccgtg
tcgctggtgccggagggggcggcgcgcgagagcctggtggccctggtcagcacctcggac
aaggactcgggtgccaacgggcaggtccgctgcgccctctacgggcacgaacactttcgg
ctgcagccggcctacgcgggcagctacctggtggtgaccgcggccgccctggaccgcgag
cgcatctccgagtacaacctgacgctggtggccgaggaccgcggcacgcccccgctgcgc
accgtcaggccctacacggtgcgcgtgggcgacgagaacgacaacgcgcccgtcttcacg
cggcccctctacgaggtgtcggtgcgcgagaacaaccctccgggcgcctacttggccacc
gtggtggcccgcgatcccgacgtgggccgcaacggccaagtcacctacaggttgctagaa
gccgaggtaggccgctcgggggacgccgtgtccacctacgtgtcggtggaccccgccacc
ggggccatctacgcgctgcgcagcttcgatttcgagaccctgcgccagctcgacgtgcgc
atccaagcgagcgacggaggctccccgcaactctccagcagcgccctggtgcaagttcgg
gtgctggaccagaacgaccacgcgcccgtcttggtgcaccccgtgccggctaacggttcc
ctcgaagtggccgtgccggggcgcacggcgaaggacaccgcggtggcgcgcgtgcaggcc
cgggatgcggacgaaggtgccaacggggagctggcttttgatctcctgcagcaggaaccc
cgagaagtcttcgccgtcgggcgccacacgggggagatcgtcctcaccggcgacctctcg
caggagccgccgggccgcgtgttccaagccctgctggtcatctccgacggcggccggccc
ccgctctccaccacggccaccgtcagcttcgtggtgaccgaaggcggcggacggggcccg
gtggcgacggctgccgggagcggcgcggggagcccagagcgctcgcgccctccgggctcg
cggctcgcagcgtccgggcccgcgctgcaatgggacacgccgctgatcgtgatcatcgtg
ctggcgggaagctgcacgctgctgctggccgctatcatcgccatcgccaccacctgcaat
cgccgcaagaaggaggtgcgcaaaggggggccctgccgggaagagcggcccggggcggcg
ggcggcggagcctcggtgcctggctccccagaggaagccggcggccggggaaccgggccc
cggcccaacatgttcgacgtgctcaccttccctggcagcgccaaagcgccctttggcagc
cccgcggccgacgcgcccccgccgcccacggtcgccgcggccgaagtgccgggctcggag
ggcggcagcgccactggggaaagcgcctgtcacttcgaggggcagcagcggctccgcggc
gcgcacgccgagccctacggtgccgctcctggcttcggcaaggaaccggcacccccagtg
gcggtctggaaaggacactcgttcaacaccatctcgggtcgggaagctgagaagttcagc
ggcaaagacagcggcaaaggggacagtgatttcaacgacagtgattctgacatcagtggg
gacgctctgaaaaaggatctcatcaaccacatgcagagtggcctgtgggcgtgtaccgct
gagtgtaagatcctgggtcactctgaccgctgctggagcccatcctgcggaggacccaac
gttcacccaccccctcaccctcctgcccagatgtccaccttctgtaagagcacctccctg
cctcgggatcctctgcgcagagacaatttctaccaagcacagctgcccaagacagtgggg
ctgcagagtgtctatgagaaagtgctgcacagagactatgacaggacagtcaccctgctc
tcccctccccgtccaggaaggctcccagacttgcaggagattggggtgcccctctatcag
tctccccctgccaggtacctatctccaaagaaggaagctgatgaaaatgtgtaa
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