Suncus etruscus (white-toothed pygmy shrew): 126016216
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Entry
126016216 CDS
T09902
Symbol
RUBCNL
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126016216 (RUBCNL)
Membrane trafficking [BR:
setr04131
]
Autophagy
Other autophagy associated proteins
Others
126016216 (RUBCNL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
Motif
Other DBs
NCBI-GeneID:
126016216
NCBI-ProteinID:
XP_049634740
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Position
8:complement(58224398..58240302)
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AA seq
657 aa
AA seq
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MVSQSTGKQDCPLDPLKEFSNDSGNIDGLSSLLNFHHPCGQSDVKVSRHKAAWINPTHAQ
QELPDFPALVPTAENSRSYFMRETVSTLYPPLLSLEHTSTKASISKDTVDSMDSSLALGA
SKMCSEISLTSSEEQNELPSHCLNMPLSKILATSPHPETGSDFLLPHQMASQDTGAVQVS
RRNTSLNSFPLEAFVLPADIEKENAHFYFADMIISTMERIKYNILSQQHTENWNTEESSG
LFMNDQAESEVTFSTNIKQNSGSSTSSDSGYEGCAMLQVSPVVEPTTLYETIKEDCKCDS
NEFVIPEFEKFSNATEIYGCPYSPSKRYVYMSNFNSPEQIAKDLYQVFHKCCMLSAVNYQ
LAASLNVSDSTVVNKEHGFEPNTAVVQDIKLKLRMRETEDWAPPRFQIIFNVHPSPKRDL
ALVAQDFLCAGCGTPIEPKFVKRLRYCEYLGKYFCHCCHSYAEACIPARILTSWDFRKYQ
VSNFSKRLLDIIWHQPVINLLNVGHSLLGKVKELDRVKEIQKQLFHIKKLLKTCRFAEST
LQVFKQVPSHLTDEYHIFSLDDLVKTKKGLLVSSLKYVLRTSLAHVARCELCQGKGFICE
FCQNPSVIFPFQTATCRRCSACRACFHKECFQASQCPRCVRKTARRSLLENLPASAT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagtctactggcaagcaggactgtcctctggaccctttgaaagagtttagc
aatgactctggcaatattgatggcttatccagcctcctgaattttcaccatccctgtggc
caatcagatgtcaaggttagtaggcataaagctgcctggattaaccccacacatgcacag
caagagttgccagattttcctgccttggtgccaacagcagaaaatagcagaagctacttt
atgcgggaaactgtctctaccttgtaccctccactgctgtcactggagcacaccagtaca
aaggcctcaatttcaaaggacactgtggattctatggacagttccttggcccttggtgca
agtaaaatgtgcagtgaaatctctctgacttcatcggaggagcaaaatgaacttccatca
cactgtttgaatatgcctctttccaagattttggccacctccccacatcctgagactggc
agtgatttcctgctgccccatcagatggcttcccaggatacaggtgctgttcaagtcagt
agaagaaacacttctttgaattccttcccattagaagcatttgtgctccctgctgatata
gaaaaggaaaatgctcacttttattttgcagatatgattatatccacaatggagaggata
aaatataacatcctgagtcaacagcacacagagaactggaacacagaagaaagcagtggg
ttatttatgaatgatcaggctgagtcagaagtgactttttctaccaatataaagcaaaat
tcagggtcatctacttcttcagacagtggctatgaaggttgtgctatgttacaggttagt
cctgtagttgaaccaactactctctatgagactataaaagaggactgcaaatgcgactcg
aatgaatttgttattccagaatttgaaaagtttagcaatgccactgaaatttatggctgt
ccctacagcccctctaagaggtatgtgtatatgtccaacttcaattctcctgagcaaata
gccaaagatttgtaccaagtattccacaaatgctgcatgttgtcagcagttaattatcag
ctggcagcttccctgaatgtatctgattccacggttgttaacaaagagcatggctttgaa
cccaacactgcggtggtacaggatattaaattaaagttgaggatgagagagactgaagac
tgggcaccacctagatttcaaatcatatttaatgttcatccatcacccaagagggacctt
gcattagtagcccaggattttctctgtgctggctgtggaactccaatagaacctaagttt
gtgaagcggctcagatactgtgaatacctggggaagtatttttgccactgctgccactcc
tatgctgaagcctgcataccggcccgaatcctcacctcatgggacttcaggaagtaccaa
gtcagcaatttctccaagcgcctgttggacatcatttggcaccaacctgttatcaatctg
ttgaatgtgggccacagtctattggggaaggtgaaggagctggatcgtgtgaaagaaatc
cagaagcaactttttcatataaagaagttgttgaagacctgcagatttgctgagagcaca
ttacaggtgttcaagcaggtgcccagccacttgacagatgaataccacattttctcactg
gatgacctggtgaagaccaagaagggactactggtgtcctcactcaagtatgttctgagg
acttctcttgcccatgtggccagatgtgagctgtgccaaggaaagggcttcatctgtgaa
ttttgccagaatccttctgtgattttcccatttcagactgcaacatgcagaagatgttca
gcctgtagagcctgctttcacaaagaatgcttccaggcctcccagtgcccccggtgtgtg
agaaaaacagcccggaggagtcttctggaaaatctgcctgcctcagccacatga
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