Suncus etruscus (white-toothed pygmy shrew): 126016239
Help
Entry
126016239 CDS
T09902
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126016239 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126016239 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126016239 (VPS36)
Membrane trafficking [BR:
setr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
126016239 (VPS36)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126016239 (VPS36)
Exosomal proteins of colorectal cancer cells
126016239 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
Motif
Other DBs
NCBI-GeneID:
126016239
NCBI-ProteinID:
XP_049634766
LinkDB
All DBs
Position
8:complement(58142162..58177237)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRVYDGEDKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPPHKEPGPFQRSRNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENIPVSQSLQTRGGSQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLVGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
LRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgtgtggaccagcggcctcctggagatcaacgagaccctcgtgatccag
cagcggggggtgcgcgtctacgacggcgaggacaagatcaaatttgatgctggaaccctt
cttcttagtacacaccggctaatatggagagatcagaaaaaccatgagtgctgcatggcc
attccactctcccaaattgtattcattgaggaacaagcagctggaattgggaaaagtgcc
aaaatagtggttcatcttcacccagctcctcctcacaaggaaccaggtccattccagaga
agcagaaactcctacatcaaactatctttcaaagagcatggccagattgagttttacagg
cgtttgtcagaggagatgacacagagaagatgggaaaatattccagtttcccaatcactg
caaacaagaggaggttcccagccaggaagaataagggctgtaggaattgttggtattgaa
agaaaactagaagaaaagagaaaagaaactgacaaaaacatttctgaggcatttgaagac
ctcagcaagttaatggtcaaggctaaggaaatggtggaattatcaaaatcaattgctaat
aagattaaagacaaacaaggtgacatcacagaagatgagaccatcaggtttaaatcctat
ttgctgagcatgggaatagcaaacccagttaccagggagacctatggctcaggtacacag
taccatatgcagctggccaagcaactggttggcatattgcaggcacctttagaggaacga
gggggaataatgtcactcacagaggtgtattgtttagtcaaccgagcccgaggaatggaa
ttgctctcacccgaagacttagtgaatgcatgcaagatgctggaagcactgaaattgcct
ctcaggctccgagtttttgacagtggtgtcatggtaattgagctgcagtcccacaaggaa
gaggaaatggtggcctcagccttagagacagtttcagaaaagggatcgctaacatcagaa
gaatttgctaagcttgtaggaatgtctgtcctcttggcaaaagaaaggttacttcttgca
gagaagatgggccatctttgccgagatgattctgtggaaggcttgcggttttatccaaat
ttatttatgacacaaagttaa
DBGET
integrated database retrieval system
